RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 RXRBP28702 533 aa29.62■■■□□ 2.33
TSEN54-208ENST00000583173 RRS1Q15050 365 aaKnown RBP29.62■■■□□ 2.33
TSEN54-208ENST00000583173 ILDR2Q71H61 639 aa29.62■■■□□ 2.33
TSEN54-208ENST00000583173 NRAPQ86VF7 1730 aa29.61■■■□□ 2.33
TSEN54-208ENST00000583173 ZNF316A6NFI3 1004 aaPredicted RBP29.59■■■□□ 2.33
TSEN54-208ENST00000583173 EVA1CP58658 441 aa29.59■■■□□ 2.33
TSEN54-208ENST00000583173 SPATA31A5Q5VU36 1347 aa29.59■■■□□ 2.33
TSEN54-208ENST00000583173 SPATA31A7Q8IWB4 1347 aa29.59■■■□□ 2.33
TSEN54-208ENST00000583173 COL5A2P05997 1499 aaPredicted RBP29.59■■■□□ 2.33
TSEN54-208ENST00000583173 ONECUT3O60422 494 aaPredicted RBP29.58■■■□□ 2.33
TSEN54-208ENST00000583173 ABCC6O95255 1503 aa29.58■■■□□ 2.33
TSEN54-208ENST00000583173 LARP1Q6PKG0 1096 aaKnown RBP29.58■■■□□ 2.33
TSEN54-208ENST00000583173 MORC1Q86VD1 984 aa29.58■■■□□ 2.33
TSEN54-208ENST00000583173 STRN4Q9NRL3 753 aa29.58■■■□□ 2.33
TSEN54-208ENST00000583173 POLKQ9UBT6 870 aa29.58■■■□□ 2.33
TSEN54-208ENST00000583173 HOXC9P31274 260 aa29.57■■■□□ 2.32
TSEN54-208ENST00000583173 DDX10Q13206 875 aaKnown RBP29.57■■■□□ 2.32
TSEN54-208ENST00000583173 EMILIN1Q9Y6C2 1016 aa29.55■■■□□ 2.32
TSEN54-208ENST00000583173 KIF24Q5T7B8 1368 aa29.54■■■□□ 2.32
TSEN54-208ENST00000583173 SPATA31A1Q5TZJ5 1347 aa29.54■■■□□ 2.32
TSEN54-208ENST00000583173 AMPHP49418 695 aa29.54■■■□□ 2.32
TSEN54-208ENST00000583173 CC2D1BQ5T0F9 858 aaKnown RBP29.54■■■□□ 2.32
TSEN54-208ENST00000583173 ANKRD26Q9UPS8 1709 aa29.54■■■□□ 2.32
TSEN54-208ENST00000583173 WDR17Q8IZU2 1322 aa29.53■■■□□ 2.32
TSEN54-208ENST00000583173 TNNT2P45379 298 aaPredicted RBP29.53■■■□□ 2.32
TSEN54-208ENST00000583173 LTN1O94822 1766 aa29.52■■■□□ 2.32
TSEN54-208ENST00000583173 GLI3P10071 1580 aa29.52■■■□□ 2.32
TSEN54-208ENST00000583173 RTL1A6NKG5 1358 aa29.52■■■□□ 2.32
TSEN54-208ENST00000583173 BLMP54132 1417 aaPredicted RBP29.51■■■□□ 2.31
TSEN54-208ENST00000583173 ERBB3P21860 1342 aa29.5■■■□□ 2.31
TSEN54-208ENST00000583173 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
TSEN54-208ENST00000583173 HSP90AB2PQ58FF8 381 aa29.5■■■□□ 2.31
TSEN54-208ENST00000583173 ANKRD24Q8TF21 1146 aa29.5■■■□□ 2.31
TSEN54-208ENST00000583173 RGPD5Q99666 1765 aa29.49■■■□□ 2.31
TSEN54-208ENST00000583173 CCDC9Q9Y3X0 531 aaKnown RBP29.49■■■□□ 2.31
TSEN54-208ENST00000583173 CARD10Q9BWT7 1032 aa29.48■■■□□ 2.31
TSEN54-208ENST00000583173 INSRP06213 1382 aa29.48■■■□□ 2.31
TSEN54-208ENST00000583173 CRB1P82279 1406 aa29.47■■■□□ 2.31
TSEN54-208ENST00000583173 FLT4P35916 1363 aa29.47■■■□□ 2.31
TSEN54-208ENST00000583173 PEAK1Q9H792 1746 aa29.46■■■□□ 2.31
TSEN54-208ENST00000583173 BARGINQ6ZT62 677 aa29.46■■■□□ 2.31
TSEN54-208ENST00000583173 THRAP3Q9Y2W1 955 aaKnown RBP29.46■■■□□ 2.31
TSEN54-208ENST00000583173 TOM1L2Q6ZVM7 507 aa29.45■■■□□ 2.31
TSEN54-208ENST00000583173 TCP11L2Q8N4U5 519 aa29.45■■■□□ 2.31
TSEN54-208ENST00000583173 MAP2P11137 1827 aaKnown RBP29.45■■■□□ 2.3
TSEN54-208ENST00000583173 SMG6Q86US8 1419 aaKnown RBP29.44■■■□□ 2.3
TSEN54-208ENST00000583173 FAM98CQ17RN3 349 aaKnown RBP29.43■■■□□ 2.3
TSEN54-208ENST00000583173 RGS12O14924 1447 aa29.43■■■□□ 2.3
TSEN54-208ENST00000583173 PPM1GO15355 546 aaPredicted RBP29.42■■■□□ 2.3
TSEN54-208ENST00000583173 CSB-PGBD3P0DP91 1061 aa29.42■■■□□ 2.3
TSEN54-208ENST00000583173 LTV1Q96GA3 475 aaPredicted RBP29.42■■■□□ 2.3
TSEN54-208ENST00000583173 USP35Q9P2H5 1018 aa29.42■■■□□ 2.3
TSEN54-208ENST00000583173 SEPT12Q8IYM1 358 aa29.41■■■□□ 2.3
TSEN54-208ENST00000583173 MTHFSP49914 203 aa29.39■■■□□ 2.3
TSEN54-208ENST00000583173 CNGB1Q14028 1251 aaPredicted RBP29.39■■■□□ 2.3
TSEN54-208ENST00000583173 NLRP2Q9NX02 1062 aa29.39■■■□□ 2.3
TSEN54-208ENST00000583173 NBPF6Q5VWK0 638 aa29.38■■■□□ 2.29
TSEN54-208ENST00000583173 NBPF4Q96M43 638 aa29.38■■■□□ 2.29
TSEN54-208ENST00000583173 PARD3Q8TEW0 1356 aa29.35■■■□□ 2.29
TSEN54-208ENST00000583173 EIF4A2Q14240 407 aaKnown RBP29.34■■■□□ 2.29
TSEN54-208ENST00000583173 PPP2R1AP30153 589 aa29.33■■■□□ 2.29
TSEN54-208ENST00000583173 DISP2A7MBM2 1401 aa29.32■■■□□ 2.28
TSEN54-208ENST00000583173 THSD7AQ9UPZ6 1657 aa29.31■■■□□ 2.28
TSEN54-208ENST00000583173 EYA1Q99502 592 aa29.31■■■□□ 2.28
TSEN54-208ENST00000583173 CDCA7Q9BWT1 371 aaPredicted RBP29.31■■■□□ 2.28
TSEN54-208ENST00000583173 IL13P35225 146 aa29.3■■■□□ 2.28
TSEN54-208ENST00000583173 RALBP1Q15311 655 aa29.29■■■□□ 2.28
TSEN54-208ENST00000583173 NCAPD2Q15021 1401 aa29.28■■■□□ 2.28
TSEN54-208ENST00000583173 IL2RBP14784 551 aa29.26■■■□□ 2.27
TSEN54-208ENST00000583173 KRT27Q7Z3Y8 459 aa29.26■■■□□ 2.27
TSEN54-208ENST00000583173 USHBP1Q8N6Y0 703 aa29.25■■■□□ 2.27
TSEN54-208ENST00000583173 FAM208AQ9UK61 1670 aaKnown RBP29.25■■■□□ 2.27
TSEN54-208ENST00000583173 RGPD2P0DJD1 1756 aa29.24■■■□□ 2.27
TSEN54-208ENST00000583173 IGSF1Q8N6C5 1336 aa29.22■■■□□ 2.27
TSEN54-208ENST00000583173 A0A0G2JS52 829 aa29.22■■■□□ 2.27
TSEN54-208ENST00000583173 MYT1Q01538 1121 aa29.22■■■□□ 2.27
TSEN54-208ENST00000583173 DDB1Q16531 1140 aa29.21■■■□□ 2.27
TSEN54-208ENST00000583173 PRKRIP1Q9H875 184 aaPredicted RBP29.21■■■□□ 2.27
TSEN54-208ENST00000583173 BRWD3Q6RI45 1802 aa29.21■■■□□ 2.27
TSEN54-208ENST00000583173 COL3A1P02461 1466 aaPredicted RBP29.21■■■□□ 2.27
TSEN54-208ENST00000583173 EXOC5O00471 708 aa29.2■■■□□ 2.26
TSEN54-208ENST00000583173 DIAPH1O60610 1272 aaKnown RBP29.19■■■□□ 2.26
TSEN54-208ENST00000583173 PARP4Q9UKK3 1724 aaKnown RBP29.19■■■□□ 2.26
TSEN54-208ENST00000583173 PDE3BQ13370 1112 aa29.17■■■□□ 2.26
TSEN54-208ENST00000583173 MARCH10Q8NA82 808 aaPredicted RBP29.17■■■□□ 2.26
TSEN54-208ENST00000583173 SOCS7O14512 581 aa29.16■■■□□ 2.26
TSEN54-208ENST00000583173 MEGF6O75095 1541 aa29.15■■■□□ 2.26
TSEN54-208ENST00000583173 FAM182BQ5T319 152 aa29.15■■■□□ 2.26
TSEN54-208ENST00000583173 WNK3Q9BYP7 1800 aa29.15■■■□□ 2.26
TSEN54-208ENST00000583173 RAPGEF4Q8WZA2 1011 aa29.14■■■□□ 2.26
TSEN54-208ENST00000583173 TATP17735 454 aaPredicted RBP29.13■■■□□ 2.25
TSEN54-208ENST00000583173 CFAP53Q96M91 514 aa29.13■■■□□ 2.25
TSEN54-208ENST00000583173 MYBBP1AQ9BQG0 1328 aaKnown RBP29.13■■■□□ 2.25
TSEN54-208ENST00000583173 OVOS2A0A0G2JMS6 1433 aa29.12■■■□□ 2.25
TSEN54-208ENST00000583173 AEBP1Q8IUX7 1158 aa29.12■■■□□ 2.25
TSEN54-208ENST00000583173 ZCRB1Q8TBF4 217 aaKnown RBP29.12■■■□□ 2.25
TSEN54-208ENST00000583173 KDRP35968 1356 aa29.12■■■□□ 2.25
TSEN54-208ENST00000583173 RGPD1P0DJD0 1748 aa29.11■■■□□ 2.25
TSEN54-208ENST00000583173 UPF1Q92900 1129 aaKnown RBP eCLIP29.11■■■□□ 2.25
TSEN54-208ENST00000583173 LRRC37A3O60309 1634 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 261.2 ms