RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
NDEL1-214ENST00000582665 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
NDEL1-214ENST00000582665 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.63□□□□□ -0.23
NDEL1-214ENST00000582665 AFF2P51816 1311 aa13.63□□□□□ -0.23
NDEL1-214ENST00000582665 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
NDEL1-214ENST00000582665 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
NDEL1-214ENST00000582665 FLT4P35916 1363 aa13.62□□□□□ -0.23
NDEL1-214ENST00000582665 HOXC9P31274 260 aa13.62□□□□□ -0.23
NDEL1-214ENST00000582665 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
NDEL1-214ENST00000582665 RALBP1Q15311 655 aa13.62□□□□□ -0.23
NDEL1-214ENST00000582665 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
NDEL1-214ENST00000582665 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
NDEL1-214ENST00000582665 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
NDEL1-214ENST00000582665 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
NDEL1-214ENST00000582665 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
NDEL1-214ENST00000582665 ATRNO75882 1429 aa13.6□□□□□ -0.23
NDEL1-214ENST00000582665 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
NDEL1-214ENST00000582665 AMPHP49418 695 aa13.6□□□□□ -0.23
NDEL1-214ENST00000582665 USP21Q9UK80 565 aa13.6□□□□□ -0.23
NDEL1-214ENST00000582665 ERBB3P21860 1342 aa13.6□□□□□ -0.23
NDEL1-214ENST00000582665 MTHFSP49914 203 aa13.59□□□□□ -0.23
NDEL1-214ENST00000582665 VPS72Q15906 364 aa13.59□□□□□ -0.23
NDEL1-214ENST00000582665 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
NDEL1-214ENST00000582665 ZNF772Q68DY9 489 aaPredicted RBP13.59□□□□□ -0.23
NDEL1-214ENST00000582665 WDR17Q8IZU2 1322 aa13.59□□□□□ -0.23
NDEL1-214ENST00000582665 RGPD5Q99666 1765 aa13.58□□□□□ -0.23
NDEL1-214ENST00000582665 ZBTB7CA1YPR0 619 aa13.58□□□□□ -0.24
NDEL1-214ENST00000582665 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-214ENST00000582665 CNGB1Q14028 1251 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-214ENST00000582665 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
NDEL1-214ENST00000582665 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-214ENST00000582665 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
NDEL1-214ENST00000582665 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
NDEL1-214ENST00000582665 SPATA31A7Q8IWB4 1347 aa13.56□□□□□ -0.24
NDEL1-214ENST00000582665 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
NDEL1-214ENST00000582665 CRB1P82279 1406 aa13.56□□□□□ -0.24
NDEL1-214ENST00000582665 NCAPD2Q15021 1401 aa13.56□□□□□ -0.24
NDEL1-214ENST00000582665 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-214ENST00000582665 CARD10Q9BWT7 1032 aa13.55□□□□□ -0.24
NDEL1-214ENST00000582665 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
NDEL1-214ENST00000582665 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
NDEL1-214ENST00000582665 GLI3P10071 1580 aa13.54□□□□□ -0.24
NDEL1-214ENST00000582665 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
NDEL1-214ENST00000582665 IL13P35225 146 aa13.54□□□□□ -0.24
NDEL1-214ENST00000582665 EVA1CP58658 441 aa13.54□□□□□ -0.24
NDEL1-214ENST00000582665 EIF4A2Q14240 407 aaKnown RBP13.54□□□□□ -0.24
NDEL1-214ENST00000582665 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
NDEL1-214ENST00000582665 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
NDEL1-214ENST00000582665 PHF23Q9BUL5 403 aaPredicted RBP13.54□□□□□ -0.24
NDEL1-214ENST00000582665 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
NDEL1-214ENST00000582665 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-214ENST00000582665 ANP32CO43423 234 aa13.52□□□□□ -0.25
NDEL1-214ENST00000582665 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.25
NDEL1-214ENST00000582665 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.25
NDEL1-214ENST00000582665 NBPF4Q96M43 638 aa13.52□□□□□ -0.25
NDEL1-214ENST00000582665 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.25
NDEL1-214ENST00000582665 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
NDEL1-214ENST00000582665 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
NDEL1-214ENST00000582665 IGSF1Q8N6C5 1336 aa13.51□□□□□ -0.25
NDEL1-214ENST00000582665 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
NDEL1-214ENST00000582665 BARGINQ6ZT62 677 aa13.51□□□□□ -0.25
NDEL1-214ENST00000582665 TOM1L2Q6ZVM7 507 aa13.51□□□□□ -0.25
NDEL1-214ENST00000582665 LTV1Q96GA3 475 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-214ENST00000582665 EYA1Q99502 592 aa13.51□□□□□ -0.25
NDEL1-214ENST00000582665 DIAPH1O60610 1272 aaKnown RBP13.5□□□□□ -0.25
NDEL1-214ENST00000582665 DIEXFQ68CQ4 756 aaKnown RBP13.5□□□□□ -0.25
NDEL1-214ENST00000582665 TCP11L2Q8N4U5 519 aa13.5□□□□□ -0.25
NDEL1-214ENST00000582665 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
NDEL1-214ENST00000582665 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
NDEL1-214ENST00000582665 KDRP35968 1356 aa13.49□□□□□ -0.25
NDEL1-214ENST00000582665 RGPD2P0DJD1 1756 aa13.49□□□□□ -0.25
NDEL1-214ENST00000582665 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
NDEL1-214ENST00000582665 THSD7AQ9UPZ6 1657 aa13.48□□□□□ -0.25
NDEL1-214ENST00000582665 RXRBP28702 533 aa13.48□□□□□ -0.25
NDEL1-214ENST00000582665 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
NDEL1-214ENST00000582665 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
NDEL1-214ENST00000582665 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.25
NDEL1-214ENST00000582665 USP35Q9P2H5 1018 aa13.46□□□□□ -0.25
NDEL1-214ENST00000582665 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
NDEL1-214ENST00000582665 CCDC184Q52MB2 194 aa13.45□□□□□ -0.26
NDEL1-214ENST00000582665 USHBP1Q8N6Y0 703 aa13.45□□□□□ -0.26
NDEL1-214ENST00000582665 RGS12O14924 1447 aa13.45□□□□□ -0.26
NDEL1-214ENST00000582665 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
NDEL1-214ENST00000582665 MEGF6O75095 1541 aa13.44□□□□□ -0.26
NDEL1-214ENST00000582665 IL2RBP14784 551 aa13.44□□□□□ -0.26
NDEL1-214ENST00000582665 AEBP1Q8IUX7 1158 aa13.44□□□□□ -0.26
NDEL1-214ENST00000582665 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
NDEL1-214ENST00000582665 OVOS2A0A0G2JMS6 1433 aa13.44□□□□□ -0.26
NDEL1-214ENST00000582665 SULT6B1Q6IMI4 303 aa13.43□□□□□ -0.26
NDEL1-214ENST00000582665 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
NDEL1-214ENST00000582665 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.261e-10■□□□□ 11.2
NDEL1-214ENST00000582665 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
NDEL1-214ENST00000582665 TNS2Q63HR2 1409 aa13.41□□□□□ -0.26
NDEL1-214ENST00000582665 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
NDEL1-214ENST00000582665 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
NDEL1-214ENST00000582665 FCHSD2O94868 740 aa13.41□□□□□ -0.26
NDEL1-214ENST00000582665 PNISRQ8TF01 805 aaKnown RBP13.41□□□□□ -0.26
NDEL1-214ENST00000582665 RAPGEF4Q8WZA2 1011 aa13.41□□□□□ -0.26
NDEL1-214ENST00000582665 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
NDEL1-214ENST00000582665 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms