RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 SKIP12755 728 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 KANK4Q5T7N3 995 aaPredicted RBP13.71□□□□□ -0.21
CDH8-207ENST00000582242 USP17L2Q6R6M4 530 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 FAM174AQ8TBP5 190 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
CDH8-207ENST00000582242 SH3RF1Q7Z6J0 888 aa13.7□□□□□ -0.22
CDH8-207ENST00000582242 AEBP1Q8IUX7 1158 aa13.7□□□□□ -0.22
CDH8-207ENST00000582242 PRR20EP86478 221 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 PRR20CP86479 221 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 PRR20DP86480 221 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 PRR20BP86481 221 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 PRR20AP86496 221 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 ZBTB33Q86T24 672 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 PHTF2Q8N3S3 785 aa13.69□□□□□ -0.22
CDH8-207ENST00000582242 FCF1Q9Y324 198 aaKnown RBP13.68□□□□□ -0.22
CDH8-207ENST00000582242 ELOAQ14241 798 aaKnown RBP13.67□□□□□ -0.22
CDH8-207ENST00000582242 PLA2G2CQ5R387 149 aa13.67□□□□□ -0.22
CDH8-207ENST00000582242 ZNF697Q5TEC3 545 aa13.67□□□□□ -0.22
CDH8-207ENST00000582242 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
CDH8-207ENST00000582242 RNF135Q8IUD6 432 aa13.66□□□□□ -0.22
CDH8-207ENST00000582242 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.22
CDH8-207ENST00000582242 LZTS3O60299 673 aaPredicted RBP13.65□□□□□ -0.22
CDH8-207ENST00000582242 BRD1O95696 1058 aa13.65□□□□□ -0.22
CDH8-207ENST00000582242 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
CDH8-207ENST00000582242 BAP1Q92560 729 aa13.65□□□□□ -0.22
CDH8-207ENST00000582242 ZNF511Q8NB15 262 aa13.64□□□□□ -0.23
CDH8-207ENST00000582242 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
CDH8-207ENST00000582242 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
CDH8-207ENST00000582242 PLPP7Q8NBV4 271 aa13.63□□□□□ -0.23
CDH8-207ENST00000582242 CARD14Q9BXL6 1004 aa13.63□□□□□ -0.23
CDH8-207ENST00000582242 MAGEB6P1A0A0J9YX57 407 aa13.62□□□□□ -0.23
CDH8-207ENST00000582242 GDF9O60383 454 aa13.62□□□□□ -0.23
CDH8-207ENST00000582242 MAP7D1Q3KQU3 841 aa13.62□□□□□ -0.23
CDH8-207ENST00000582242 DEPDC4Q8N2C3 294 aa13.62□□□□□ -0.23
CDH8-207ENST00000582242 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
CDH8-207ENST00000582242 NCOA4Q13772 614 aa13.61□□□□□ -0.23
CDH8-207ENST00000582242 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
CDH8-207ENST00000582242 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
CDH8-207ENST00000582242 PKDCCQ504Y2 493 aa13.61□□□□□ -0.23
CDH8-207ENST00000582242 DGAT1O75907 488 aa13.6□□□□□ -0.23
CDH8-207ENST00000582242 KCNA1Q09470 495 aa13.6□□□□□ -0.23
CDH8-207ENST00000582242 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
CDH8-207ENST00000582242 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
CDH8-207ENST00000582242 ZMIZ1Q9ULJ6 1067 aa13.6□□□□□ -0.23
CDH8-207ENST00000582242 CARNS1A5YM72 827 aa13.59□□□□□ -0.23
CDH8-207ENST00000582242 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
CDH8-207ENST00000582242 C4orf48Q5BLP8 95 aa13.59□□□□□ -0.23
CDH8-207ENST00000582242 ZNF787Q6DD87 383 aa13.59□□□□□ -0.23
CDH8-207ENST00000582242 C1QTNF2Q9BXJ5 285 aa13.59□□□□□ -0.23
CDH8-207ENST00000582242 CCDC9Q9Y3X0 531 aaKnown RBP13.59□□□□□ -0.23
CDH8-207ENST00000582242 TNFRSF10AO00220 468 aa13.58□□□□□ -0.24
CDH8-207ENST00000582242 AGERQ15109 404 aa13.58□□□□□ -0.24
CDH8-207ENST00000582242 USP17L15C9J2P7 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L13C9JLJ4 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L11C9JVI0 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L21D6R901 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L18D6R9N7 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L22D6RA61 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L17D6RBQ6 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L19D6RCP7 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L20D6RJB6 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 MYT1Q01538 1121 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 USP17L24Q0WX57 530 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 EML3Q32P44 896 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 SLC10A4Q96EP9 437 aa13.57□□□□□ -0.24
CDH8-207ENST00000582242 NOVA2Q9UNW9 492 aaKnown RBP13.57□□□□□ -0.24
CDH8-207ENST00000582242 TMEM164Q5U3C3 297 aa13.56□□□□□ -0.24
CDH8-207ENST00000582242 SH3BP2P78314 561 aa13.55□□□□□ -0.24
CDH8-207ENST00000582242 PTK7Q13308 1070 aa13.55□□□□□ -0.24
CDH8-207ENST00000582242 CRTC2Q53ET0 693 aaPredicted RBP13.55□□□□□ -0.24
CDH8-207ENST00000582242 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
CDH8-207ENST00000582242 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
CDH8-207ENST00000582242 RASA1P20936 1047 aa13.54□□□□□ -0.24
CDH8-207ENST00000582242 RPIAP49247 311 aa13.54□□□□□ -0.24
CDH8-207ENST00000582242 LARP1Q6PKG0 1096 aaKnown RBP13.54□□□□□ -0.24
CDH8-207ENST00000582242 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
CDH8-207ENST00000582242 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
CDH8-207ENST00000582242 DOLKQ9UPQ8 538 aa13.54□□□□□ -0.24
CDH8-207ENST00000582242 FAM187AA6NFU0 413 aa13.53□□□□□ -0.24
CDH8-207ENST00000582242 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
CDH8-207ENST00000582242 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
CDH8-207ENST00000582242 RNF20Q5VTR2 975 aa13.53□□□□□ -0.24
CDH8-207ENST00000582242 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.25
CDH8-207ENST00000582242 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
CDH8-207ENST00000582242 ESPNB1AK53 854 aa13.51□□□□□ -0.25
CDH8-207ENST00000582242 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
CDH8-207ENST00000582242 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
CDH8-207ENST00000582242 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
CDH8-207ENST00000582242 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
CDH8-207ENST00000582242 TRIM32Q13049 653 aa13.5□□□□□ -0.25
CDH8-207ENST00000582242 CCDC125Q86Z20 511 aa13.5□□□□□ -0.25
CDH8-207ENST00000582242 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
CDH8-207ENST00000582242 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms