RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
SMCHD1-207ENST00000581711 GPKOWQ92917 476 aaPredicted RBP eCLIP11.81□□□□□ -0.524e-6■■□□□ 13
SMCHD1-207ENST00000581711 SUZ12Q15022 739 aaKnown RBP11.8□□□□□ -0.52
SMCHD1-207ENST00000581711 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
SMCHD1-207ENST00000581711 FIGNL2A6NMB9 653 aa11.79□□□□□ -0.52
SMCHD1-207ENST00000581711 PDE4DQ08499 809 aa11.79□□□□□ -0.52
SMCHD1-207ENST00000581711 CBLBQ13191 982 aa11.79□□□□□ -0.52
SMCHD1-207ENST00000581711 Q6ZVU0 165 aa11.79□□□□□ -0.52
SMCHD1-207ENST00000581711 PGPEP1Q9NXJ5 209 aa11.79□□□□□ -0.52
SMCHD1-207ENST00000581711 COL25A1Q9BXS0 654 aaPredicted RBP11.78□□□□□ -0.52
SMCHD1-207ENST00000581711 SPINT1O43278 529 aa11.77□□□□□ -0.53
SMCHD1-207ENST00000581711 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
SMCHD1-207ENST00000581711 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.53
SMCHD1-207ENST00000581711 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
SMCHD1-207ENST00000581711 NANOS1Q8WY41 292 aaKnown RBP11.77□□□□□ -0.53
SMCHD1-207ENST00000581711 ADAMTS8Q9UP79 889 aa11.77□□□□□ -0.53
SMCHD1-207ENST00000581711 RASSF7Q02833 373 aa11.76□□□□□ -0.53
SMCHD1-207ENST00000581711 RNF225M0QZC1 329 aaPredicted RBP11.75□□□□□ -0.53
SMCHD1-207ENST00000581711 GDF11O95390 407 aa11.74□□□□□ -0.53
SMCHD1-207ENST00000581711 RNFT1Q5M7Z0 435 aa11.74□□□□□ -0.53
SMCHD1-207ENST00000581711 ARHGAP9Q9BRR9 750 aa11.74□□□□□ -0.53
SMCHD1-207ENST00000581711 CTDSPL2Q05D32 466 aa11.73□□□□□ -0.53
SMCHD1-207ENST00000581711 ZNF385CQ66K41 422 aaPredicted RBP11.73□□□□□ -0.53
SMCHD1-207ENST00000581711 PDXDC2PQ6P474 469 aa11.73□□□□□ -0.53
SMCHD1-207ENST00000581711 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
SMCHD1-207ENST00000581711 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
SMCHD1-207ENST00000581711 SLC35F4A4IF30 521 aa11.72□□□□□ -0.53
SMCHD1-207ENST00000581711 CDV3Q9UKY7 258 aaKnown RBP11.72□□□□□ -0.53
SMCHD1-207ENST00000581711 ITGA6P23229 1130 aa11.71□□□□□ -0.53
SMCHD1-207ENST00000581711 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
SMCHD1-207ENST00000581711 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
SMCHD1-207ENST00000581711 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
SMCHD1-207ENST00000581711 CTSOP43234 321 aaPredicted RBP11.7□□□□□ -0.54
SMCHD1-207ENST00000581711 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
SMCHD1-207ENST00000581711 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
SMCHD1-207ENST00000581711 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
SMCHD1-207ENST00000581711 VWA5B2Q8N398 1253 aa11.69□□□□□ -0.54
SMCHD1-207ENST00000581711 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
SMCHD1-207ENST00000581711 RELBQ01201 579 aa11.68□□□□□ -0.54
SMCHD1-207ENST00000581711 INTS6LQ5JSJ4 861 aaKnown RBP11.68□□□□□ -0.54
SMCHD1-207ENST00000581711 ZBTB33Q86T24 672 aa11.68□□□□□ -0.54
SMCHD1-207ENST00000581711 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
SMCHD1-207ENST00000581711 INSM2Q96T92 566 aaPredicted RBP11.68□□□□□ -0.54
SMCHD1-207ENST00000581711 CDC14CA4D256 554 aa11.67□□□□□ -0.54
SMCHD1-207ENST00000581711 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
SMCHD1-207ENST00000581711 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
SMCHD1-207ENST00000581711 SV2AQ7L0J3 742 aa11.65□□□□□ -0.54
SMCHD1-207ENST00000581711 OCSTAMPQ9BR26 566 aa11.65□□□□□ -0.54
SMCHD1-207ENST00000581711 SLC24A3Q9HC58 644 aa11.65□□□□□ -0.54
SMCHD1-207ENST00000581711 POLMQ9NP87 494 aaPredicted RBP11.65□□□□□ -0.54
SMCHD1-207ENST00000581711 RNF217Q8TC41 542 aa11.64□□□□□ -0.55
SMCHD1-207ENST00000581711 ARHGEF15O94989 841 aa11.63□□□□□ -0.55
SMCHD1-207ENST00000581711 NR6A1Q15406 480 aa11.63□□□□□ -0.55
SMCHD1-207ENST00000581711 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
SMCHD1-207ENST00000581711 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
SMCHD1-207ENST00000581711 IRS1P35568 1242 aa11.61□□□□□ -0.55
SMCHD1-207ENST00000581711 PTK2Q05397 1052 aa11.61□□□□□ -0.55
SMCHD1-207ENST00000581711 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
SMCHD1-207ENST00000581711 ADAM32Q8TC27 787 aa11.6□□□□□ -0.55
SMCHD1-207ENST00000581711 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
SMCHD1-207ENST00000581711 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
SMCHD1-207ENST00000581711 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
SMCHD1-207ENST00000581711 GPSM3Q9Y4H4 160 aa11.59□□□□□ -0.55
SMCHD1-207ENST00000581711 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
SMCHD1-207ENST00000581711 ADH1AP07327 375 aa11.58□□□□□ -0.56
SMCHD1-207ENST00000581711 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
SMCHD1-207ENST00000581711 MARSP56192 900 aaKnown RBP11.57□□□□□ -0.56
SMCHD1-207ENST00000581711 FOXD4L5Q5VV16 416 aaPredicted RBP11.57□□□□□ -0.56
SMCHD1-207ENST00000581711 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
SMCHD1-207ENST00000581711 RAB15P59190 212 aa11.56□□□□□ -0.56
SMCHD1-207ENST00000581711 LILRA1O75019 489 aa11.55□□□□□ -0.56
SMCHD1-207ENST00000581711 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
SMCHD1-207ENST00000581711 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
SMCHD1-207ENST00000581711 ERVH48-1M5A8F1 160 aa11.54□□□□□ -0.56
SMCHD1-207ENST00000581711 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
SMCHD1-207ENST00000581711 LYPD4Q6UWN0 246 aa11.54□□□□□ -0.56
SMCHD1-207ENST00000581711 KDF1Q8NAX2 398 aaPredicted RBP11.54□□□□□ -0.56
SMCHD1-207ENST00000581711 SCARF2Q96GP6 870 aaPredicted RBP11.54□□□□□ -0.56
SMCHD1-207ENST00000581711 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
SMCHD1-207ENST00000581711 IGHA1P01876 353 aa11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 PTGIRP43119 386 aa11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 SRSF11Q05519 484 aaKnown RBP11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 GAS6Q14393 721 aa11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 PPP2R2DQ66LE6 453 aa11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 PROCA1Q8NCQ7 364 aaPredicted RBP11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMCHD1-207ENST00000581711 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
SMCHD1-207ENST00000581711 EPS8L1Q8TE68 723 aa11.52□□□□□ -0.57
SMCHD1-207ENST00000581711 AP1G2O75843 785 aa11.51□□□□□ -0.57
SMCHD1-207ENST00000581711 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
SMCHD1-207ENST00000581711 LYSMD3Q7Z3D4 306 aa11.51□□□□□ -0.57
SMCHD1-207ENST00000581711 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
SMCHD1-207ENST00000581711 FOXK2Q01167 660 aa11.5□□□□□ -0.57
SMCHD1-207ENST00000581711 ESPNB1AK53 854 aa11.49□□□□□ -0.57
SMCHD1-207ENST00000581711 CELA2BP08218 269 aaPredicted RBP11.49□□□□□ -0.57
SMCHD1-207ENST00000581711 PNMA1Q8ND90 353 aa11.49□□□□□ -0.57
SMCHD1-207ENST00000581711 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
SMCHD1-207ENST00000581711 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
SMCHD1-207ENST00000581711 PRICKLE2Q7Z3G6 844 aa11.47□□□□□ -0.57
SMCHD1-207ENST00000581711 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms