RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 HDGFL2Q7Z4V5 671 aaPredicted RBP29.55■■■□□ 2.32
CCDC42-203ENST00000581598 TESK2Q96S53 571 aa29.55■■■□□ 2.32
CCDC42-203ENST00000581598 WNK3Q9BYP7 1800 aa29.55■■■□□ 2.32
CCDC42-203ENST00000581598 EN1Q05925 392 aaPredicted RBP29.54■■■□□ 2.32
CCDC42-203ENST00000581598 TMC1Q8TDI8 760 aa29.54■■■□□ 2.32
CCDC42-203ENST00000581598 EDC4Q6P2E9 1401 aaKnown RBP29.54■■■□□ 2.32
CCDC42-203ENST00000581598 SLC12A5Q9H2X9 1139 aa29.53■■■□□ 2.32
CCDC42-203ENST00000581598 NINLQ9Y2I6 1382 aa29.52■■■□□ 2.32
CCDC42-203ENST00000581598 C11orf95C9JLR9 678 aaPredicted RBP29.52■■■□□ 2.32
CCDC42-203ENST00000581598 TOM1L2Q6ZVM7 507 aa29.52■■■□□ 2.32
CCDC42-203ENST00000581598 TERF2IPQ9NYB0 399 aa29.52■■■□□ 2.32
CCDC42-203ENST00000581598 ST20-MTHFSA0A0A6YYL1 179 aa29.51■■■□□ 2.31
CCDC42-203ENST00000581598 TRIM37O94972 964 aa29.51■■■□□ 2.31
CCDC42-203ENST00000581598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.51■■■□□ 2.31
CCDC42-203ENST00000581598 LRRC37A3O60309 1634 aa29.5■■■□□ 2.31
CCDC42-203ENST00000581598 A0A1W2PP64 1363 aa29.5■■■□□ 2.31
CCDC42-203ENST00000581598 PARD3Q8TEW0 1356 aa29.5■■■□□ 2.31
CCDC42-203ENST00000581598 PEAK1Q9H792 1746 aa29.48■■■□□ 2.31
CCDC42-203ENST00000581598 SOX12O15370 315 aa29.48■■■□□ 2.31
CCDC42-203ENST00000581598 NME9Q86XW9 330 aa29.48■■■□□ 2.31
CCDC42-203ENST00000581598 CAMKK2Q96RR4 588 aa29.47■■■□□ 2.31
CCDC42-203ENST00000581598 CDCA7Q9BWT1 371 aaPredicted RBP29.47■■■□□ 2.31
CCDC42-203ENST00000581598 CARD10Q9BWT7 1032 aa29.46■■■□□ 2.31
CCDC42-203ENST00000581598 LTN1O94822 1766 aa29.45■■■□□ 2.31
CCDC42-203ENST00000581598 OVOS2A0A0G2JMS6 1433 aa29.45■■■□□ 2.3
CCDC42-203ENST00000581598 OVOS2A0A0J9YW53 1432 aa29.45■■■□□ 2.3
CCDC42-203ENST00000581598 OVOS2Q6IE36 1432 aa29.45■■■□□ 2.3
CCDC42-203ENST00000581598 APBA3O96018 575 aa29.44■■■□□ 2.3
CCDC42-203ENST00000581598 EZH2Q15910 746 aaKnown RBP29.44■■■□□ 2.3
CCDC42-203ENST00000581598 DDB1Q16531 1140 aa29.44■■■□□ 2.3
CCDC42-203ENST00000581598 TIMELESSQ9UNS1 1208 aa29.44■■■□□ 2.3
CCDC42-203ENST00000581598 LRP5O75197 1615 aa29.44■■■□□ 2.3
CCDC42-203ENST00000581598 RREB1Q92766 1687 aa29.43■■■□□ 2.3
CCDC42-203ENST00000581598 CLSPNQ9HAW4 1339 aa29.43■■■□□ 2.3
CCDC42-203ENST00000581598 CCDC7Q96M83 1385 aa29.42■■■□□ 2.3
CCDC42-203ENST00000581598 SBF2Q86WG5 1849 aa29.42■■■□□ 2.3
CCDC42-203ENST00000581598 USP47Q96K76 1375 aa29.41■■■□□ 2.3
CCDC42-203ENST00000581598 CSB-PGBD3P0DP91 1061 aa29.41■■■□□ 2.3
CCDC42-203ENST00000581598 BCL9O00512 1426 aa29.4■■■□□ 2.3
CCDC42-203ENST00000581598 PSDA5PKW4 1024 aaPredicted RBP29.38■■■□□ 2.29
CCDC42-203ENST00000581598 ERBB3P21860 1342 aa29.38■■■□□ 2.29
CCDC42-203ENST00000581598 ANKRD36BQ8N2N9 1353 aa29.37■■■□□ 2.29
CCDC42-203ENST00000581598 RGPD3A6NKT7 1758 aaPredicted RBP29.36■■■□□ 2.29
CCDC42-203ENST00000581598 RGPD4Q7Z3J3 1758 aa29.36■■■□□ 2.29
CCDC42-203ENST00000581598 TMF1P82094 1093 aa29.36■■■□□ 2.29
CCDC42-203ENST00000581598 NUP188Q5SRE5 1749 aa29.36■■■□□ 2.29
CCDC42-203ENST00000581598 MARCH10Q8NA82 808 aaPredicted RBP29.33■■■□□ 2.29
CCDC42-203ENST00000581598 R3HDM1Q15032 1099 aaKnown RBP29.32■■■□□ 2.28
CCDC42-203ENST00000581598 TNS2Q63HR2 1409 aa29.3■■■□□ 2.28
CCDC42-203ENST00000581598 EXOC5O00471 708 aa29.3■■■□□ 2.28
CCDC42-203ENST00000581598 FAM208AQ9UK61 1670 aaKnown RBP29.29■■■□□ 2.28
CCDC42-203ENST00000581598 PLSCR1O15162 318 aa29.29■■■□□ 2.28
CCDC42-203ENST00000581598 CDCA8Q53HL2 280 aa29.29■■■□□ 2.28
CCDC42-203ENST00000581598 COG3Q96JB2 828 aa29.29■■■□□ 2.28
CCDC42-203ENST00000581598 BCL11BQ9C0K0 894 aaPredicted RBP29.29■■■□□ 2.28
CCDC42-203ENST00000581598 ANKRD24Q8TF21 1146 aa29.28■■■□□ 2.28
CCDC42-203ENST00000581598 IP6K1Q92551 441 aa29.28■■■□□ 2.28
CCDC42-203ENST00000581598 NLRP2Q9NX02 1062 aa29.27■■■□□ 2.28
CCDC42-203ENST00000581598 NBPF14Q5TI25 921 aa29.25■■■□□ 2.27
CCDC42-203ENST00000581598 IL2RBP14784 551 aa29.23■■■□□ 2.27
CCDC42-203ENST00000581598 MAP3K19Q56UN5 1328 aa29.2■■■□□ 2.27
CCDC42-203ENST00000581598 FYB1O15117 783 aa29.2■■■□□ 2.26
CCDC42-203ENST00000581598 MYOM1P52179 1685 aa29.2■■■□□ 2.26
CCDC42-203ENST00000581598 PTF1AQ7RTS3 328 aa29.19■■■□□ 2.26
CCDC42-203ENST00000581598 KIF20BQ96Q89 1820 aa29.19■■■□□ 2.26
CCDC42-203ENST00000581598 NHSQ6T4R5 1651 aa29.18■■■□□ 2.26
CCDC42-203ENST00000581598 RTL1A6NKG5 1358 aa29.18■■■□□ 2.26
CCDC42-203ENST00000581598 HOXC9P31274 260 aa29.17■■■□□ 2.26
CCDC42-203ENST00000581598 AMPHP49418 695 aa29.14■■■□□ 2.26
CCDC42-203ENST00000581598 GGNBP2Q9H3C7 697 aa29.14■■■□□ 2.26
CCDC42-203ENST00000581598 FBLN1P23142 703 aa29.12■■■□□ 2.25
CCDC42-203ENST00000581598 PROM2Q8N271 834 aa29.12■■■□□ 2.25
CCDC42-203ENST00000581598 LTV1Q96GA3 475 aaPredicted RBP29.11■■■□□ 2.25
CCDC42-203ENST00000581598 RGPD2P0DJD1 1756 aa29.11■■■□□ 2.25
CCDC42-203ENST00000581598 KCNQ2O43526 872 aa29.09■■■□□ 2.25
CCDC42-203ENST00000581598 CARD14Q9BXL6 1004 aa29.09■■■□□ 2.25
CCDC42-203ENST00000581598 KIF24Q5T7B8 1368 aa29.09■■■□□ 2.25
CCDC42-203ENST00000581598 RRS1Q15050 365 aaKnown RBP29.07■■■□□ 2.24
CCDC42-203ENST00000581598 TXNRD1Q16881 649 aa29.07■■■□□ 2.24
CCDC42-203ENST00000581598 NSD3Q9BZ95 1437 aa29.06■■■□□ 2.24
CCDC42-203ENST00000581598 ANO8Q9HCE9 1232 aaPredicted RBP29.06■■■□□ 2.24
CCDC42-203ENST00000581598 BTAF1O14981 1849 aa29.06■■■□□ 2.24
CCDC42-203ENST00000581598 KAT6BQ8WYB5 2073 aa29.05■■■□□ 2.24
CCDC42-203ENST00000581598 CASZ1Q86V15 1759 aa29.04■■■□□ 2.24
CCDC42-203ENST00000581598 ACSBG1Q96GR2 724 aa29.04■■■□□ 2.24
CCDC42-203ENST00000581598 SMG6Q86US8 1419 aaKnown RBP29.03■■■□□ 2.24
CCDC42-203ENST00000581598 INSRP06213 1382 aa29.03■■■□□ 2.24
CCDC42-203ENST00000581598 CCER1Q8TC90 406 aaPredicted RBP29.03■■■□□ 2.24
CCDC42-203ENST00000581598 SHANK3Q9BYB0 1731 aa29.03■■■□□ 2.24
CCDC42-203ENST00000581598 FLT4P35916 1363 aa29.02■■■□□ 2.24
CCDC42-203ENST00000581598 SPON1Q9HCB6 807 aa29.01■■■□□ 2.23
CCDC42-203ENST00000581598 MEGF6O75095 1541 aa29■■■□□ 2.23
CCDC42-203ENST00000581598 CGNL1Q0VF96 1302 aa29■■■□□ 2.23
CCDC42-203ENST00000581598 NBPF6Q5VWK0 638 aa29■■■□□ 2.23
CCDC42-203ENST00000581598 NBPF4Q96M43 638 aa29■■■□□ 2.23
CCDC42-203ENST00000581598 EIF4G2P78344 907 aaKnown RBP eCLIP28.99■■■□□ 2.23
CCDC42-203ENST00000581598 DDX54Q8TDD1 881 aaKnown RBP28.99■■■□□ 2.23
CCDC42-203ENST00000581598 ANKRD26Q9UPS8 1709 aa28.99■■■□□ 2.23
CCDC42-203ENST00000581598 ZCRB1Q8TBF4 217 aaKnown RBP28.98■■■□□ 2.23
CCDC42-203ENST00000581598 PAPPAQ13219 1627 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms