RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 COL18A1P39060 1754 aa17.71■□□□□ 0.43
SLC9A3R1-204ENST00000581356 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
SLC9A3R1-204ENST00000581356 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
SLC9A3R1-204ENST00000581356 CRB1P82279 1406 aa17.71■□□□□ 0.43
SLC9A3R1-204ENST00000581356 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
SLC9A3R1-204ENST00000581356 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
SLC9A3R1-204ENST00000581356 SF3B2Q13435 895 aaKnown RBP17.69■□□□□ 0.42
SLC9A3R1-204ENST00000581356 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
SLC9A3R1-204ENST00000581356 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
SLC9A3R1-204ENST00000581356 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
SLC9A3R1-204ENST00000581356 OVOS2A0A0J9YW53 1432 aa17.67■□□□□ 0.42
SLC9A3R1-204ENST00000581356 OVOS2Q6IE36 1432 aa17.67■□□□□ 0.42
SLC9A3R1-204ENST00000581356 EIF4G2P78344 907 aaKnown RBP eCLIP17.67■□□□□ 0.42
SLC9A3R1-204ENST00000581356 PDE3BQ13370 1112 aa17.67■□□□□ 0.42
SLC9A3R1-204ENST00000581356 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
SLC9A3R1-204ENST00000581356 HSPA5P11021 654 aaKnown RBP17.66■□□□□ 0.42
SLC9A3R1-204ENST00000581356 COG3Q96JB2 828 aa17.66■□□□□ 0.42
SLC9A3R1-204ENST00000581356 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
SLC9A3R1-204ENST00000581356 FYB1O15117 783 aa17.64■□□□□ 0.41
SLC9A3R1-204ENST00000581356 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
SLC9A3R1-204ENST00000581356 FBLN1P23142 703 aa17.63■□□□□ 0.41
SLC9A3R1-204ENST00000581356 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
SLC9A3R1-204ENST00000581356 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
SLC9A3R1-204ENST00000581356 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
SLC9A3R1-204ENST00000581356 ABCC6O95255 1503 aa17.62■□□□□ 0.41
SLC9A3R1-204ENST00000581356 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
SLC9A3R1-204ENST00000581356 LTN1O94822 1766 aa17.61■□□□□ 0.41
SLC9A3R1-204ENST00000581356 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
SLC9A3R1-204ENST00000581356 TRIM37O94972 964 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 BAG6P46379 1132 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 DDB1Q16531 1140 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 IP6K1Q92551 441 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 ERBB3P21860 1342 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 MYOM1P52179 1685 aa17.6■□□□□ 0.41
SLC9A3R1-204ENST00000581356 PARP4Q9UKK3 1724 aaKnown RBP17.59■□□□□ 0.41
SLC9A3R1-204ENST00000581356 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
SLC9A3R1-204ENST00000581356 CDCA7Q9BWT1 371 aaPredicted RBP17.59■□□□□ 0.41
SLC9A3R1-204ENST00000581356 CCDC7Q96M83 1385 aa17.58■□□□□ 0.4
SLC9A3R1-204ENST00000581356 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
SLC9A3R1-204ENST00000581356 NSD3Q9BZ95 1437 aa17.57■□□□□ 0.4
SLC9A3R1-204ENST00000581356 AMPHP49418 695 aa17.57■□□□□ 0.4
SLC9A3R1-204ENST00000581356 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
SLC9A3R1-204ENST00000581356 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
SLC9A3R1-204ENST00000581356 RGPD1P0DJD0 1748 aa17.56■□□□□ 0.4
SLC9A3R1-204ENST00000581356 HOXC9P31274 260 aa17.56■□□□□ 0.4
SLC9A3R1-204ENST00000581356 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
SLC9A3R1-204ENST00000581356 LRRC37A3O60309 1634 aa17.55■□□□□ 0.4
SLC9A3R1-204ENST00000581356 EXOC5O00471 708 aa17.55■□□□□ 0.4
SLC9A3R1-204ENST00000581356 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
SLC9A3R1-204ENST00000581356 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
SLC9A3R1-204ENST00000581356 APBA3O96018 575 aa17.54■□□□□ 0.4
SLC9A3R1-204ENST00000581356 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
SLC9A3R1-204ENST00000581356 KIF20BQ96Q89 1820 aa17.53■□□□□ 0.4
SLC9A3R1-204ENST00000581356 OVOS2A0A0G2JMS6 1433 aa17.53■□□□□ 0.4
SLC9A3R1-204ENST00000581356 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
SLC9A3R1-204ENST00000581356 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
SLC9A3R1-204ENST00000581356 IL2RBP14784 551 aa17.52■□□□□ 0.4
SLC9A3R1-204ENST00000581356 EZH2Q15910 746 aaKnown RBP17.52■□□□□ 0.4
SLC9A3R1-204ENST00000581356 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
SLC9A3R1-204ENST00000581356 PANK3Q9H999 370 aa17.51■□□□□ 0.39
SLC9A3R1-204ENST00000581356 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
SLC9A3R1-204ENST00000581356 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
SLC9A3R1-204ENST00000581356 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
SLC9A3R1-204ENST00000581356 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
SLC9A3R1-204ENST00000581356 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
SLC9A3R1-204ENST00000581356 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
SLC9A3R1-204ENST00000581356 FLT4P35916 1363 aa17.46■□□□□ 0.39
SLC9A3R1-204ENST00000581356 PPM1GO15355 546 aaPredicted RBP17.46■□□□□ 0.39
SLC9A3R1-204ENST00000581356 NBPF6Q5VWK0 638 aa17.46■□□□□ 0.39
SLC9A3R1-204ENST00000581356 NBPF4Q96M43 638 aa17.46■□□□□ 0.39
SLC9A3R1-204ENST00000581356 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
SLC9A3R1-204ENST00000581356 BCL9O00512 1426 aa17.46■□□□□ 0.39
SLC9A3R1-204ENST00000581356 FAM208AQ9UK61 1670 aaKnown RBP17.45■□□□□ 0.38
SLC9A3R1-204ENST00000581356 INSRP06213 1382 aa17.45■□□□□ 0.38
SLC9A3R1-204ENST00000581356 PSDA5PKW4 1024 aaPredicted RBP17.45■□□□□ 0.38
SLC9A3R1-204ENST00000581356 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
SLC9A3R1-204ENST00000581356 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
SLC9A3R1-204ENST00000581356 PARD3Q8TEW0 1356 aa17.44■□□□□ 0.38
SLC9A3R1-204ENST00000581356 TNNT2P45379 298 aaPredicted RBP17.44■□□□□ 0.38
SLC9A3R1-204ENST00000581356 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
SLC9A3R1-204ENST00000581356 SMG6Q86US8 1419 aaKnown RBP17.44■□□□□ 0.38
SLC9A3R1-204ENST00000581356 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
SLC9A3R1-204ENST00000581356 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
SLC9A3R1-204ENST00000581356 DDX54Q8TDD1 881 aaKnown RBP17.43■□□□□ 0.38
SLC9A3R1-204ENST00000581356 PLSCR1O15162 318 aa17.42■□□□□ 0.38
SLC9A3R1-204ENST00000581356 KCNQ2O43526 872 aa17.42■□□□□ 0.38
SLC9A3R1-204ENST00000581356 R3HDM1Q15032 1099 aaKnown RBP17.42■□□□□ 0.38
SLC9A3R1-204ENST00000581356 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
SLC9A3R1-204ENST00000581356 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
SLC9A3R1-204ENST00000581356 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
SLC9A3R1-204ENST00000581356 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
SLC9A3R1-204ENST00000581356 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
SLC9A3R1-204ENST00000581356 MEGF6O75095 1541 aa17.39■□□□□ 0.37
SLC9A3R1-204ENST00000581356 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
SLC9A3R1-204ENST00000581356 MAP2P11137 1827 aaKnown RBP17.38■□□□□ 0.37
SLC9A3R1-204ENST00000581356 NBPF14Q5TI25 921 aa17.38■□□□□ 0.37
SLC9A3R1-204ENST00000581356 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
SLC9A3R1-204ENST00000581356 RREB1Q92766 1687 aa17.38■□□□□ 0.37
SLC9A3R1-204ENST00000581356 NSD2O96028 1365 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms