RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
TRAPPC8-208ENST00000581057 WNT7AO00755 349 aa12.81□□□□□ -0.36
TRAPPC8-208ENST00000581057 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
TRAPPC8-208ENST00000581057 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC8-208ENST00000581057 KCTD15Q96SI1 283 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC8-208ENST00000581057 ATP9BO43861 1147 aa12.79□□□□□ -0.36
TRAPPC8-208ENST00000581057 CFAP70Q5T0N1 1121 aa12.79□□□□□ -0.36
TRAPPC8-208ENST00000581057 DEPDC4Q8N2C3 294 aa12.78□□□□□ -0.36
TRAPPC8-208ENST00000581057 MAFBQ9Y5Q3 323 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC8-208ENST00000581057 SIAH2O43255 324 aa12.77□□□□□ -0.37
TRAPPC8-208ENST00000581057 TSGA10IPQ3SY00 556 aa12.77□□□□□ -0.37
TRAPPC8-208ENST00000581057 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.37
TRAPPC8-208ENST00000581057 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.37
TRAPPC8-208ENST00000581057 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
TRAPPC8-208ENST00000581057 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 USP17L5A8MUK1 530 aa12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 FSHRP23945 695 aa12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 PKD2L1Q9P0L9 805 aa12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 MAP4K5Q9Y4K4 846 aa12.75□□□□□ -0.37
TRAPPC8-208ENST00000581057 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
TRAPPC8-208ENST00000581057 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
TRAPPC8-208ENST00000581057 CDK15Q96Q40 435 aa12.74□□□□□ -0.37
TRAPPC8-208ENST00000581057 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
TRAPPC8-208ENST00000581057 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 ESPNB1AK53 854 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 OXLD1Q5BKU9 147 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 PCDHB11Q9Y5F2 797 aa12.73□□□□□ -0.37
TRAPPC8-208ENST00000581057 ADH1CP00326 375 aa12.71□□□□□ -0.37
TRAPPC8-208ENST00000581057 GRM5P41594 1212 aa12.71□□□□□ -0.37
TRAPPC8-208ENST00000581057 NCOA4Q13772 614 aa12.71□□□□□ -0.37
TRAPPC8-208ENST00000581057 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
TRAPPC8-208ENST00000581057 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC8-208ENST00000581057 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
TRAPPC8-208ENST00000581057 CYP4X1Q8N118 509 aa12.7□□□□□ -0.38
TRAPPC8-208ENST00000581057 CDCA7Q9BWT1 371 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC8-208ENST00000581057 WASF2Q9Y6W5 498 aa12.7□□□□□ -0.38
TRAPPC8-208ENST00000581057 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 GDF9O60383 454 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 EML3Q32P44 896 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 TRAF7Q6Q0C0 670 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 MPNDQ8N594 471 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 SNIP1Q8TAD8 396 aaKnown RBP12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 ARXQ96QS3 562 aa12.69□□□□□ -0.38
TRAPPC8-208ENST00000581057 HOMEZQ8IX15 550 aa12.68□□□□□ -0.38
TRAPPC8-208ENST00000581057 VRTNQ9H8Y1 702 aa12.68□□□□□ -0.38
TRAPPC8-208ENST00000581057 TMPRSS4Q9NRS4 437 aa12.68□□□□□ -0.38
TRAPPC8-208ENST00000581057 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
TRAPPC8-208ENST00000581057 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
TRAPPC8-208ENST00000581057 NR5A1Q13285 461 aa12.67□□□□□ -0.38
TRAPPC8-208ENST00000581057 PLEKHM2Q8IWE5 1019 aa12.67□□□□□ -0.38
TRAPPC8-208ENST00000581057 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
TRAPPC8-208ENST00000581057 CCDC116Q8IYX3 515 aa12.66□□□□□ -0.38
TRAPPC8-208ENST00000581057 J3QL48 77 aa12.65□□□□□ -0.38
TRAPPC8-208ENST00000581057 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC8-208ENST00000581057 NR3C2P08235 984 aa12.65□□□□□ -0.38
TRAPPC8-208ENST00000581057 DHX9Q08211 1270 aaKnown RBP12.65□□□□□ -0.38
TRAPPC8-208ENST00000581057 NNTQ13423 1086 aa12.64□□□□□ -0.39
TRAPPC8-208ENST00000581057 PPP1R26Q5T8A7 1209 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC8-208ENST00000581057 TRIM67Q6ZTA4 783 aa12.64□□□□□ -0.39
TRAPPC8-208ENST00000581057 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
TRAPPC8-208ENST00000581057 CYLDQ9NQC7 956 aa12.64□□□□□ -0.39
TRAPPC8-208ENST00000581057 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
TRAPPC8-208ENST00000581057 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC8-208ENST00000581057 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
TRAPPC8-208ENST00000581057 KANK4Q5T7N3 995 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC8-208ENST00000581057 CCDC125Q86Z20 511 aa12.63□□□□□ -0.39
TRAPPC8-208ENST00000581057 USP4Q13107 963 aa12.62□□□□□ -0.39
TRAPPC8-208ENST00000581057 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC8-208ENST00000581057 RASA1P20936 1047 aa12.61□□□□□ -0.39
TRAPPC8-208ENST00000581057 SCTRP47872 440 aa12.61□□□□□ -0.39
TRAPPC8-208ENST00000581057 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC8-208ENST00000581057 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
TRAPPC8-208ENST00000581057 TOR4AQ9NXH8 423 aa12.61□□□□□ -0.39
TRAPPC8-208ENST00000581057 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
TRAPPC8-208ENST00000581057 RGS20O76081 388 aa12.6□□□□□ -0.39
TRAPPC8-208ENST00000581057 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
TRAPPC8-208ENST00000581057 PGPEP1Q9NXJ5 209 aa12.6□□□□□ -0.39
TRAPPC8-208ENST00000581057 PRR20EP86478 221 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 PRR20CP86479 221 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 PRR20DP86480 221 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 PRR20BP86481 221 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 PRR20AP86496 221 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 PDZRN3Q9UPQ7 1066 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
TRAPPC8-208ENST00000581057 SMPD1P17405 629 aa12.58□□□□□ -0.4
TRAPPC8-208ENST00000581057 GTF2IP78347 998 aa12.58□□□□□ -0.4
TRAPPC8-208ENST00000581057 MYT1Q01538 1121 aa12.58□□□□□ -0.4
TRAPPC8-208ENST00000581057 PSME1Q06323 249 aa12.58□□□□□ -0.4
TRAPPC8-208ENST00000581057 TRIM50Q86XT4 487 aa12.58□□□□□ -0.4
TRAPPC8-208ENST00000581057 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
TRAPPC8-208ENST00000581057 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms