RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 AEBP2Q6ZN18 517 aaPredicted RBP32.31■■■□□ 2.76
TRAPPC8-208ENST00000581057 CHIC1Q5VXU3 224 aa31.88■■■□□ 2.69
TRAPPC8-208ENST00000581057 PHF23Q9BUL5 403 aaPredicted RBP28.09■■■□□ 2.09
TRAPPC8-208ENST00000581057 SENP3Q9H4L4 574 aaPredicted RBP27.33■■□□□ 1.97
TRAPPC8-208ENST00000581057 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
TRAPPC8-208ENST00000581057 FOXD1Q16676 465 aa25.35■■□□□ 1.65
TRAPPC8-208ENST00000581057 ADRA2BP18089 450 aa24.73■■□□□ 1.55
TRAPPC8-208ENST00000581057 PPP6R1Q9UPN7 881 aa24.7■■□□□ 1.54
TRAPPC8-208ENST00000581057 PIAS4Q8N2W9 510 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC8-208ENST00000581057 MSH5O43196 834 aa23.2■■□□□ 1.3
TRAPPC8-208ENST00000581057 PPP4R3CPQ6ZMV5 832 aa23.05■■□□□ 1.28
TRAPPC8-208ENST00000581057 KCNA4P22459 653 aa22.96■■□□□ 1.27
TRAPPC8-208ENST00000581057 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
TRAPPC8-208ENST00000581057 NCBP3Q53F19 620 aaKnown RBP22.53■■□□□ 1.2
TRAPPC8-208ENST00000581057 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC8-208ENST00000581057 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
TRAPPC8-208ENST00000581057 NPM3O75607 178 aaKnown RBP22.21■■□□□ 1.15
TRAPPC8-208ENST00000581057 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
TRAPPC8-208ENST00000581057 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
TRAPPC8-208ENST00000581057 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
TRAPPC8-208ENST00000581057 RNF216Q9NWF9 866 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC8-208ENST00000581057 HOXD11P31277 338 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC8-208ENST00000581057 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
TRAPPC8-208ENST00000581057 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
TRAPPC8-208ENST00000581057 ZBTB22O15209 634 aa21.1■□□□□ 0.97
TRAPPC8-208ENST00000581057 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
TRAPPC8-208ENST00000581057 FOXD4L1Q9NU39 408 aa20.98■□□□□ 0.95
TRAPPC8-208ENST00000581057 SLC4A2P04920 1241 aa20.87■□□□□ 0.93
TRAPPC8-208ENST00000581057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
TRAPPC8-208ENST00000581057 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
TRAPPC8-208ENST00000581057 MYCNP04198 464 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC8-208ENST00000581057 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC8-208ENST00000581057 ATXN8OSP0DMR3 200 aa20.15■□□□□ 0.82
TRAPPC8-208ENST00000581057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC8-208ENST00000581057 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
TRAPPC8-208ENST00000581057 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC8-208ENST00000581057 ATF5Q9Y2D1 282 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC8-208ENST00000581057 RNF39Q9H2S5 420 aa19.9■□□□□ 0.78
TRAPPC8-208ENST00000581057 APLP2Q06481 763 aa19.84■□□□□ 0.77
TRAPPC8-208ENST00000581057 C1QBPQ07021 282 aaKnown RBP19.68■□□□□ 0.74
TRAPPC8-208ENST00000581057 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC8-208ENST00000581057 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC8-208ENST00000581057 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC8-208ENST00000581057 CAPN15O75808 1086 aa19.6■□□□□ 0.73
TRAPPC8-208ENST00000581057 POLA2Q14181 598 aa19.33■□□□□ 0.68
TRAPPC8-208ENST00000581057 FKBP8Q14318 412 aa19.29■□□□□ 0.68
TRAPPC8-208ENST00000581057 ABCB7O75027 752 aa19.28■□□□□ 0.68
TRAPPC8-208ENST00000581057 CACNB1Q02641 598 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC8-208ENST00000581057 FBLN2P98095 1184 aa19.11■□□□□ 0.65
TRAPPC8-208ENST00000581057 DSG3P32926 999 aa19.09■□□□□ 0.65
TRAPPC8-208ENST00000581057 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC8-208ENST00000581057 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC8-208ENST00000581057 SPDYE4A6NLX3 237 aa18.88■□□□□ 0.61
TRAPPC8-208ENST00000581057 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
TRAPPC8-208ENST00000581057 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC8-208ENST00000581057 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
TRAPPC8-208ENST00000581057 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
TRAPPC8-208ENST00000581057 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
TRAPPC8-208ENST00000581057 PROM2Q8N271 834 aa18.49■□□□□ 0.55
TRAPPC8-208ENST00000581057 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
TRAPPC8-208ENST00000581057 SSUH2Q9Y2M2 353 aa18.36■□□□□ 0.53
TRAPPC8-208ENST00000581057 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAPPC8-208ENST00000581057 VASPP50552 380 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC8-208ENST00000581057 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
TRAPPC8-208ENST00000581057 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
TRAPPC8-208ENST00000581057 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC8-208ENST00000581057 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
TRAPPC8-208ENST00000581057 AKT1S1Q96B36 256 aa18.03■□□□□ 0.48
TRAPPC8-208ENST00000581057 IFNLR1Q8IU57 520 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC8-208ENST00000581057 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
TRAPPC8-208ENST00000581057 MIER1Q8N108 512 aa17.9■□□□□ 0.46
TRAPPC8-208ENST00000581057 REM2Q8IYK8 340 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC8-208ENST00000581057 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
TRAPPC8-208ENST00000581057 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
TRAPPC8-208ENST00000581057 SPDYE1Q8NFV5 336 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC8-208ENST00000581057 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
TRAPPC8-208ENST00000581057 PRR29P0C7W0 189 aa17.73■□□□□ 0.43
TRAPPC8-208ENST00000581057 SPOCK2Q92563 424 aa17.7■□□□□ 0.42
TRAPPC8-208ENST00000581057 PITPNM1O00562 1244 aa17.69■□□□□ 0.42
TRAPPC8-208ENST00000581057 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC8-208ENST00000581057 CREBZFQ9NS37 354 aa17.54■□□□□ 0.4
TRAPPC8-208ENST00000581057 PKD2Q13563 968 aa17.49■□□□□ 0.39
TRAPPC8-208ENST00000581057 CIZ1Q9ULV3 898 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC8-208ENST00000581057 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
TRAPPC8-208ENST00000581057 CHADLQ6NUI6 762 aa17.4■□□□□ 0.38
TRAPPC8-208ENST00000581057 ECM2O94769 699 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC8-208ENST00000581057 MNX1P50219 401 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC8-208ENST00000581057 NUBP1P53384 320 aa17.32■□□□□ 0.36
TRAPPC8-208ENST00000581057 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
TRAPPC8-208ENST00000581057 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
TRAPPC8-208ENST00000581057 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRAPPC8-208ENST00000581057 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
TRAPPC8-208ENST00000581057 GSE1Q14687 1217 aa17.25■□□□□ 0.35
TRAPPC8-208ENST00000581057 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC8-208ENST00000581057 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
TRAPPC8-208ENST00000581057 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
TRAPPC8-208ENST00000581057 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC8-208ENST00000581057 RGL2O15211 777 aa17.18■□□□□ 0.34
TRAPPC8-208ENST00000581057 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
TRAPPC8-208ENST00000581057 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms