RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 ZNF692Q9BU19 519 aaPredicted RBP24.13■■□□□ 1.45
EIF4A1-216ENST00000580888 TNS1Q9HBL0 1735 aaKnown RBP24.13■■□□□ 1.45
EIF4A1-216ENST00000580888 AMER1Q5JTC6 1135 aaPredicted RBP24.12■■□□□ 1.45
EIF4A1-216ENST00000580888 BARGINQ6ZT62 677 aa24.12■■□□□ 1.45
EIF4A1-216ENST00000580888 STRN4Q9NRL3 753 aa24.12■■□□□ 1.45
EIF4A1-216ENST00000580888 COL5A2P05997 1499 aaPredicted RBP24.11■■□□□ 1.45
EIF4A1-216ENST00000580888 USP54Q70EL1 1684 aa24.11■■□□□ 1.45
EIF4A1-216ENST00000580888 SRCAPQ6ZRS2 3230 aa24.1■■□□□ 1.45
EIF4A1-216ENST00000580888 NLRP6P59044 892 aa24.1■■□□□ 1.45
EIF4A1-216ENST00000580888 DEFB132Q7Z7B7 95 aa24.1■■□□□ 1.45
EIF4A1-216ENST00000580888 PARP4Q9UKK3 1724 aaKnown RBP24.1■■□□□ 1.45
EIF4A1-216ENST00000580888 AATKQ6ZMQ8 1374 aa24.09■■□□□ 1.45
EIF4A1-216ENST00000580888 EVA1CP58658 441 aa24.09■■□□□ 1.45
EIF4A1-216ENST00000580888 TTC21BQ7Z4L5 1316 aa24.09■■□□□ 1.45
EIF4A1-216ENST00000580888 PNISRQ8TF01 805 aaKnown RBP24.08■■□□□ 1.45
EIF4A1-216ENST00000580888 DISP2A7MBM2 1401 aa24.08■■□□□ 1.44
EIF4A1-216ENST00000580888 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.44
EIF4A1-216ENST00000580888 LARP1Q6PKG0 1096 aaKnown RBP24.07■■□□□ 1.44
EIF4A1-216ENST00000580888 KNSTRNQ9Y448 316 aa24.07■■□□□ 1.44
EIF4A1-216ENST00000580888 THRAP3Q9Y2W1 955 aaKnown RBP24.06■■□□□ 1.44
EIF4A1-216ENST00000580888 WNK3Q9BYP7 1800 aa24.05■■□□□ 1.44
EIF4A1-216ENST00000580888 TCP11L2Q8N4U5 519 aa24.05■■□□□ 1.44
EIF4A1-216ENST00000580888 RGPD5Q99666 1765 aa24.05■■□□□ 1.44
EIF4A1-216ENST00000580888 CRB1P82279 1406 aa24.04■■□□□ 1.44
EIF4A1-216ENST00000580888 BAG6P46379 1132 aa24.04■■□□□ 1.44
EIF4A1-216ENST00000580888 CARD14Q9BXL6 1004 aa24.04■■□□□ 1.44
EIF4A1-216ENST00000580888 CD163L1Q9NR16 1453 aa24.04■■□□□ 1.44
EIF4A1-216ENST00000580888 NINLQ9Y2I6 1382 aa24.03■■□□□ 1.44
EIF4A1-216ENST00000580888 NFAT5O94916 1531 aa24.03■■□□□ 1.44
EIF4A1-216ENST00000580888 ABCC6O95255 1503 aa24.03■■□□□ 1.44
EIF4A1-216ENST00000580888 FAM182BQ5T319 152 aa24.02■■□□□ 1.44
EIF4A1-216ENST00000580888 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
EIF4A1-216ENST00000580888 INSRP06213 1382 aa24.02■■□□□ 1.44
EIF4A1-216ENST00000580888 CC2D1BQ5T0F9 858 aaKnown RBP24.01■■□□□ 1.43
EIF4A1-216ENST00000580888 FAM196AQ6ZSG2 479 aa24.01■■□□□ 1.43
EIF4A1-216ENST00000580888 TMC1Q8TDI8 760 aa24.01■■□□□ 1.43
EIF4A1-216ENST00000580888 USP35Q9P2H5 1018 aa24.01■■□□□ 1.43
EIF4A1-216ENST00000580888 FAM9BQ8IZU0 186 aa24■■□□□ 1.43
EIF4A1-216ENST00000580888 USP31Q70CQ4 1352 aa24■■□□□ 1.43
EIF4A1-216ENST00000580888 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
EIF4A1-216ENST00000580888 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
EIF4A1-216ENST00000580888 GTF3C3Q9Y5Q9 886 aa23.98■■□□□ 1.43
EIF4A1-216ENST00000580888 LRRC37A3O60309 1634 aa23.98■■□□□ 1.43
EIF4A1-216ENST00000580888 PEAK1Q9H792 1746 aa23.98■■□□□ 1.43
EIF4A1-216ENST00000580888 ANKRD36BQ8N2N9 1353 aa23.97■■□□□ 1.43
EIF4A1-216ENST00000580888 SLC12A5Q9H2X9 1139 aa23.97■■□□□ 1.43
EIF4A1-216ENST00000580888 PDE3BQ13370 1112 aa23.96■■□□□ 1.43
EIF4A1-216ENST00000580888 SBF2Q86WG5 1849 aa23.96■■□□□ 1.43
EIF4A1-216ENST00000580888 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
EIF4A1-216ENST00000580888 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
EIF4A1-216ENST00000580888 AXIN2Q9Y2T1 843 aa23.95■■□□□ 1.42
EIF4A1-216ENST00000580888 LTN1O94822 1766 aa23.95■■□□□ 1.42
EIF4A1-216ENST00000580888 RREB1Q92766 1687 aa23.95■■□□□ 1.42
EIF4A1-216ENST00000580888 LRP5O75197 1615 aa23.95■■□□□ 1.42
EIF4A1-216ENST00000580888 ZBED9Q6R2W3 1325 aa23.94■■□□□ 1.42
EIF4A1-216ENST00000580888 EN1Q05925 392 aaPredicted RBP23.94■■□□□ 1.42
EIF4A1-216ENST00000580888 EDC4Q6P2E9 1401 aaKnown RBP23.93■■□□□ 1.42
EIF4A1-216ENST00000580888 ZBTB7CA1YPR0 619 aa23.93■■□□□ 1.42
EIF4A1-216ENST00000580888 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
EIF4A1-216ENST00000580888 TRIM37O94972 964 aa23.92■■□□□ 1.42
EIF4A1-216ENST00000580888 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
EIF4A1-216ENST00000580888 NSD3Q9BZ95 1437 aa23.92■■□□□ 1.42
EIF4A1-216ENST00000580888 A0A1W2PP64 1363 aa23.91■■□□□ 1.42
EIF4A1-216ENST00000580888 TOM1L2Q6ZVM7 507 aa23.9■■□□□ 1.42
EIF4A1-216ENST00000580888 CAMKK2Q96RR4 588 aa23.9■■□□□ 1.42
EIF4A1-216ENST00000580888 RGPD3A6NKT7 1758 aaPredicted RBP23.9■■□□□ 1.42
EIF4A1-216ENST00000580888 RGPD4Q7Z3J3 1758 aa23.9■■□□□ 1.42
EIF4A1-216ENST00000580888 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.41
EIF4A1-216ENST00000580888 NUP188Q5SRE5 1749 aa23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 OVOS2A0A0J9YW53 1432 aa23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 OVOS2Q6IE36 1432 aa23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 CDCA7Q9BWT1 371 aaPredicted RBP23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 CARD10Q9BWT7 1032 aa23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 NSD2O96028 1365 aa23.88■■□□□ 1.41
EIF4A1-216ENST00000580888 EZH2Q15910 746 aaKnown RBP23.87■■□□□ 1.41
EIF4A1-216ENST00000580888 NME9Q86XW9 330 aa23.87■■□□□ 1.41
EIF4A1-216ENST00000580888 BCL9O00512 1426 aa23.85■■□□□ 1.41
EIF4A1-216ENST00000580888 SOX12O15370 315 aa23.85■■□□□ 1.41
EIF4A1-216ENST00000580888 APBA3O96018 575 aa23.85■■□□□ 1.41
EIF4A1-216ENST00000580888 DDB1Q16531 1140 aa23.85■■□□□ 1.41
EIF4A1-216ENST00000580888 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
EIF4A1-216ENST00000580888 PSDA5PKW4 1024 aaPredicted RBP23.82■■□□□ 1.4
EIF4A1-216ENST00000580888 FAM208AQ9UK61 1670 aaKnown RBP23.81■■□□□ 1.4
EIF4A1-216ENST00000580888 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
EIF4A1-216ENST00000580888 ERBB3P21860 1342 aa23.81■■□□□ 1.4
EIF4A1-216ENST00000580888 MARCH10Q8NA82 808 aaPredicted RBP23.78■■□□□ 1.4
EIF4A1-216ENST00000580888 TNS2Q63HR2 1409 aa23.77■■□□□ 1.4
EIF4A1-216ENST00000580888 R3HDM1Q15032 1099 aaKnown RBP23.77■■□□□ 1.4
EIF4A1-216ENST00000580888 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
EIF4A1-216ENST00000580888 PLSCR1O15162 318 aa23.75■■□□□ 1.39
EIF4A1-216ENST00000580888 EXOC5O00471 708 aa23.74■■□□□ 1.39
EIF4A1-216ENST00000580888 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
EIF4A1-216ENST00000580888 BCL11BQ9C0K0 894 aaPredicted RBP23.74■■□□□ 1.39
EIF4A1-216ENST00000580888 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
EIF4A1-216ENST00000580888 KIF20BQ96Q89 1820 aa23.73■■□□□ 1.39
EIF4A1-216ENST00000580888 ANKRD24Q8TF21 1146 aa23.72■■□□□ 1.39
EIF4A1-216ENST00000580888 IP6K1Q92551 441 aa23.72■■□□□ 1.39
EIF4A1-216ENST00000580888 SMG6Q86US8 1419 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms