RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-212ENST00000580838 TRMT44Q8IYL2 757 aaKnown RBP8.88□□□□□ -0.99
PTPRM-212ENST00000580838 CECR2Q9BXF3 1484 aa8.86□□□□□ -0.99
PTPRM-212ENST00000580838 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
PTPRM-212ENST00000580838 HELBQ8NG08 1087 aaPredicted RBP8.86□□□□□ -0.99
PTPRM-212ENST00000580838 TSEN34Q9BSV6 310 aaKnown RBP8.85□□□□□ -0.99
PTPRM-212ENST00000580838 EMILIN1Q9Y6C2 1016 aa8.85□□□□□ -0.99
PTPRM-212ENST00000580838 TOP2AP11388 1531 aaKnown RBP8.85□□□□□ -0.99
PTPRM-212ENST00000580838 EIF4G1Q04637 1599 aaKnown RBP8.84□□□□□ -0.99
PTPRM-212ENST00000580838 EEA1Q15075 1411 aa8.84□□□□□ -0.99
PTPRM-212ENST00000580838 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
PTPRM-212ENST00000580838 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
PTPRM-212ENST00000580838 CLK2P49760 499 aaKnown RBP8.83□□□□□ -1
PTPRM-212ENST00000580838 ERFEQ4G0M1 354 aa8.83□□□□□ -1
PTPRM-212ENST00000580838 GPR161Q8N6U8 529 aaKnown RBP8.83□□□□□ -1
PTPRM-212ENST00000580838 WIZO95785 1651 aa8.83□□□□□ -1
PTPRM-212ENST00000580838 KRT76Q01546 638 aa8.82□□□□□ -1
PTPRM-212ENST00000580838 GPKOWQ92917 476 aaPredicted RBP eCLIP8.82□□□□□ -1
PTPRM-212ENST00000580838 TTLL8A6PVC2 850 aa8.81□□□□□ -1
PTPRM-212ENST00000580838 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
PTPRM-212ENST00000580838 CBLBQ13191 982 aa8.81□□□□□ -1
PTPRM-212ENST00000580838 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -1
PTPRM-212ENST00000580838 PPP1R26Q5T8A7 1209 aaPredicted RBP8.81□□□□□ -1
PTPRM-212ENST00000580838 SLC24A3Q9HC58 644 aa8.81□□□□□ -1
PTPRM-212ENST00000580838 POLR3EQ9NVU0 708 aa8.81□□□□□ -1
PTPRM-212ENST00000580838 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
PTPRM-212ENST00000580838 GSK3AP49840 483 aa8.8□□□□□ -1
PTPRM-212ENST00000580838 PTSQ03393 145 aa8.8□□□□□ -1
PTPRM-212ENST00000580838 Q6ZVU0 165 aa8.8□□□□□ -1
PTPRM-212ENST00000580838 FIGNL2A6NMB9 653 aa8.79□□□□□ -1
PTPRM-212ENST00000580838 FAM9AQ8IZU1 332 aaPredicted RBP8.79□□□□□ -1
PTPRM-212ENST00000580838 SPINT1O43278 529 aa8.78□□□□□ -1
PTPRM-212ENST00000580838 KCNMA1Q12791 1236 aa8.78□□□□□ -1
PTPRM-212ENST00000580838 RSPH6AQ9H0K4 717 aa8.78□□□□□ -1
PTPRM-212ENST00000580838 SMARCA4P51532 1647 aa8.78□□□□□ -1
PTPRM-212ENST00000580838 PDXDC2PQ6P474 469 aa8.77□□□□□ -1.01
PTPRM-212ENST00000580838 LRRN4Q8WUT4 740 aa8.77□□□□□ -1.01
PTPRM-212ENST00000580838 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1.01
PTPRM-212ENST00000580838 ARHGAP9Q9BRR9 750 aa8.77□□□□□ -1.01
PTPRM-212ENST00000580838 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
PTPRM-212ENST00000580838 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
PTPRM-212ENST00000580838 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
PTPRM-212ENST00000580838 KCTD15Q96SI1 283 aaPredicted RBP8.76□□□□□ -1.01
PTPRM-212ENST00000580838 FKBPLQ9UIM3 349 aa8.76□□□□□ -1.01
PTPRM-212ENST00000580838 LOC100996750A0A140TA64 210 aa8.75□□□□□ -1.01
PTPRM-212ENST00000580838 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
PTPRM-212ENST00000580838 NANOS1Q8WY41 292 aaKnown RBP8.75□□□□□ -1.01
PTPRM-212ENST00000580838 KRTAP4-6Q9BYQ5 205 aa8.75□□□□□ -1.01
PTPRM-212ENST00000580838 SLC10A4Q96EP9 437 aa8.74□□□□□ -1.01
PTPRM-212ENST00000580838 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
PTPRM-212ENST00000580838 OCSTAMPQ9BR26 566 aa8.74□□□□□ -1.01
PTPRM-212ENST00000580838 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
PTPRM-212ENST00000580838 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
PTPRM-212ENST00000580838 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
PTPRM-212ENST00000580838 SLC35F4A4IF30 521 aa8.73□□□□□ -1.01
PTPRM-212ENST00000580838 NR6A1Q15406 480 aa8.73□□□□□ -1.01
PTPRM-212ENST00000580838 INTS6LQ5JSJ4 861 aaKnown RBP8.73□□□□□ -1.01
PTPRM-212ENST00000580838 RNFT1Q5M7Z0 435 aa8.73□□□□□ -1.01
PTPRM-212ENST00000580838 KCTD17Q8N5Z5 321 aa8.73□□□□□ -1.01
PTPRM-212ENST00000580838 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
PTPRM-212ENST00000580838 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
PTPRM-212ENST00000580838 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
PTPRM-212ENST00000580838 ADAMTS8Q9UP79 889 aa8.72□□□□□ -1.01
PTPRM-212ENST00000580838 CCDC88BA6NC98 1476 aa8.71□□□□□ -1.01
PTPRM-212ENST00000580838 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
PTPRM-212ENST00000580838 INSM2Q96T92 566 aaPredicted RBP8.71□□□□□ -1.02
PTPRM-212ENST00000580838 ITGA6P23229 1130 aa8.7□□□□□ -1.02
PTPRM-212ENST00000580838 RELBQ01201 579 aa8.7□□□□□ -1.02
PTPRM-212ENST00000580838 RASSF7Q02833 373 aa8.7□□□□□ -1.02
PTPRM-212ENST00000580838 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-212ENST00000580838 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
PTPRM-212ENST00000580838 ZC3H4Q9UPT8 1303 aaKnown RBP8.7□□□□□ -1.02
PTPRM-212ENST00000580838 CEP162Q5TB80 1403 aa8.7□□□□□ -1.02
PTPRM-212ENST00000580838 SUZ12Q15022 739 aaKnown RBP8.69□□□□□ -1.02
PTPRM-212ENST00000580838 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
PTPRM-212ENST00000580838 VWA5B2Q8N398 1253 aa8.69□□□□□ -1.02
PTPRM-212ENST00000580838 TMEM151AQ8N4L1 468 aa8.69□□□□□ -1.02
PTPRM-212ENST00000580838 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
PTPRM-212ENST00000580838 GOLGA3Q08378 1498 aa8.69□□□□□ -1.02
PTPRM-212ENST00000580838 PTK2Q05397 1052 aa8.68□□□□□ -1.02
PTPRM-212ENST00000580838 PPP2R2DQ66LE6 453 aa8.68□□□□□ -1.02
PTPRM-212ENST00000580838 ADAM32Q8TC27 787 aa8.68□□□□□ -1.02
PTPRM-212ENST00000580838 WHAMMQ8TF30 809 aa8.68□□□□□ -1.02
PTPRM-212ENST00000580838 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.68□□□□□ -1.02
PTPRM-212ENST00000580838 TMPRSS4Q9NRS4 437 aa8.68□□□□□ -1.02
PTPRM-212ENST00000580838 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
PTPRM-212ENST00000580838 GDF11O95390 407 aa8.67□□□□□ -1.02
PTPRM-212ENST00000580838 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
PTPRM-212ENST00000580838 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
PTPRM-212ENST00000580838 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
PTPRM-212ENST00000580838 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
PTPRM-212ENST00000580838 ZNF395Q9H8N7 513 aaPredicted RBP8.67□□□□□ -1.02
PTPRM-212ENST00000580838 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
PTPRM-212ENST00000580838 GPSM3Q9Y4H4 160 aa8.67□□□□□ -1.02
PTPRM-212ENST00000580838 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
PTPRM-212ENST00000580838 CDC14CA4D256 554 aa8.66□□□□□ -1.02
PTPRM-212ENST00000580838 CENPBP07199 599 aaPredicted RBP8.66□□□□□ -1.02
PTPRM-212ENST00000580838 SV2AQ7L0J3 742 aa8.66□□□□□ -1.02
PTPRM-212ENST00000580838 AP1G2O75843 785 aa8.65□□□□□ -1.02
PTPRM-212ENST00000580838 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms