RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 NPAS3Q8IXF0 933 aa11.63□□□□□ -0.55
VNN3-214ENST00000580813 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
VNN3-214ENST00000580813 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
VNN3-214ENST00000580813 MAN1A2O60476 641 aa11.62□□□□□ -0.55
VNN3-214ENST00000580813 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
VNN3-214ENST00000580813 MEIOBQ8N635 442 aa11.62□□□□□ -0.55
VNN3-214ENST00000580813 IRF7Q92985 503 aa11.62□□□□□ -0.55
VNN3-214ENST00000580813 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
VNN3-214ENST00000580813 RFC5P40937 340 aa11.61□□□□□ -0.55
VNN3-214ENST00000580813 PTK2Q05397 1052 aa11.61□□□□□ -0.55
VNN3-214ENST00000580813 EPS8L1Q8TE68 723 aa11.61□□□□□ -0.55
VNN3-214ENST00000580813 H3BM21 787 aa11.6□□□□□ -0.55
VNN3-214ENST00000580813 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
VNN3-214ENST00000580813 KCTD15Q96SI1 283 aaPredicted RBP11.6□□□□□ -0.55
VNN3-214ENST00000580813 HMX1Q9NP08 348 aaPredicted RBP11.6□□□□□ -0.55
VNN3-214ENST00000580813 GMPRP36959 345 aa11.59□□□□□ -0.55
VNN3-214ENST00000580813 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
VNN3-214ENST00000580813 PNMA1Q8ND90 353 aa11.59□□□□□ -0.55
VNN3-214ENST00000580813 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
VNN3-214ENST00000580813 CDV3Q9UKY7 258 aaKnown RBP11.59□□□□□ -0.55
VNN3-214ENST00000580813 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
VNN3-214ENST00000580813 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
VNN3-214ENST00000580813 ADAM32Q8TC27 787 aa11.57□□□□□ -0.56
VNN3-214ENST00000580813 OCSTAMPQ9BR26 566 aa11.57□□□□□ -0.56
VNN3-214ENST00000580813 CBLBQ13191 982 aa11.56□□□□□ -0.56
VNN3-214ENST00000580813 STK17AQ9UEE5 414 aa11.56□□□□□ -0.56
VNN3-214ENST00000580813 GPSM3Q9Y4H4 160 aa11.56□□□□□ -0.56
VNN3-214ENST00000580813 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
VNN3-214ENST00000580813 DHX9Q08211 1270 aaKnown RBP11.55□□□□□ -0.56
VNN3-214ENST00000580813 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
VNN3-214ENST00000580813 INTS6LQ5JSJ4 861 aaKnown RBP11.54□□□□□ -0.56
VNN3-214ENST00000580813 SOS2Q07890 1332 aaPredicted RBP11.53□□□□□ -0.56
VNN3-214ENST00000580813 RAB15P59190 212 aa11.52□□□□□ -0.57
VNN3-214ENST00000580813 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
VNN3-214ENST00000580813 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
VNN3-214ENST00000580813 NBPF20Q3BBV1 942 aa11.51□□□□□ -0.57
VNN3-214ENST00000580813 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
VNN3-214ENST00000580813 TTLL8A6PVC2 850 aa11.5□□□□□ -0.57
VNN3-214ENST00000580813 Q6ZVU0 165 aa11.5□□□□□ -0.57
VNN3-214ENST00000580813 FIGNL2A6NMB9 653 aa11.49□□□□□ -0.57
VNN3-214ENST00000580813 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
VNN3-214ENST00000580813 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
VNN3-214ENST00000580813 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
VNN3-214ENST00000580813 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
VNN3-214ENST00000580813 RELBQ01201 579 aa11.47□□□□□ -0.57
VNN3-214ENST00000580813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
VNN3-214ENST00000580813 TMPRSS4Q9NRS4 437 aa11.47□□□□□ -0.57
VNN3-214ENST00000580813 SPINT1O43278 529 aa11.46□□□□□ -0.57
VNN3-214ENST00000580813 ZSCAN1Q8NBB4 408 aa11.46□□□□□ -0.57
VNN3-214ENST00000580813 FAM181BA6NEQ2 426 aa11.44□□□□□ -0.58
VNN3-214ENST00000580813 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
VNN3-214ENST00000580813 ERVH48-1M5A8F1 160 aa11.43□□□□□ -0.58
VNN3-214ENST00000580813 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
VNN3-214ENST00000580813 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
VNN3-214ENST00000580813 PTSQ03393 145 aa11.42□□□□□ -0.58
VNN3-214ENST00000580813 INSM2Q96T92 566 aaPredicted RBP11.42□□□□□ -0.58
VNN3-214ENST00000580813 POLMQ9NP87 494 aaPredicted RBP11.42□□□□□ -0.58
VNN3-214ENST00000580813 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
VNN3-214ENST00000580813 CTSOP43234 321 aaPredicted RBP11.41□□□□□ -0.58
VNN3-214ENST00000580813 GJD4Q96KN9 370 aaPredicted RBP11.41□□□□□ -0.58
VNN3-214ENST00000580813 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
VNN3-214ENST00000580813 LORP23490 312 aaPredicted RBP11.4□□□□□ -0.58
VNN3-214ENST00000580813 ESPNB1AK53 854 aa11.39□□□□□ -0.59
VNN3-214ENST00000580813 ADH1AP07327 375 aa11.38□□□□□ -0.59
VNN3-214ENST00000580813 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
VNN3-214ENST00000580813 ADD1P35611 737 aaKnown RBP11.38□□□□□ -0.59
VNN3-214ENST00000580813 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
VNN3-214ENST00000580813 LILRA1O75019 489 aa11.37□□□□□ -0.59
VNN3-214ENST00000580813 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
VNN3-214ENST00000580813 CCDC155Q8N6L0 562 aa11.37□□□□□ -0.59
VNN3-214ENST00000580813 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
VNN3-214ENST00000580813 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
VNN3-214ENST00000580813 PTGIRP43119 386 aa11.34□□□□□ -0.59
VNN3-214ENST00000580813 BANK1Q8NDB2 785 aa11.34□□□□□ -0.59
VNN3-214ENST00000580813 RNF217Q8TC41 542 aa11.34□□□□□ -0.59
VNN3-214ENST00000580813 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
VNN3-214ENST00000580813 SLC35F4A4IF30 521 aa11.32□□□□□ -0.6
VNN3-214ENST00000580813 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
VNN3-214ENST00000580813 KDF1Q8NAX2 398 aaPredicted RBP11.31□□□□□ -0.6
VNN3-214ENST00000580813 NR1H3Q13133 447 aa11.3□□□□□ -0.6
VNN3-214ENST00000580813 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
VNN3-214ENST00000580813 MTMR14Q8NCE2 650 aa11.3□□□□□ -0.6
VNN3-214ENST00000580813 CNTNAP3BQ96NU0 1288 aa11.3□□□□□ -0.6
VNN3-214ENST00000580813 CNTNAP3Q9BZ76 1288 aa11.3□□□□□ -0.6
VNN3-214ENST00000580813 SNRKQ9NRH2 765 aa11.3□□□□□ -0.6
VNN3-214ENST00000580813 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
VNN3-214ENST00000580813 CDC14CA4D256 554 aa11.29□□□□□ -0.6
VNN3-214ENST00000580813 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
VNN3-214ENST00000580813 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
VNN3-214ENST00000580813 ITGA6P23229 1130 aa11.28□□□□□ -0.6
VNN3-214ENST00000580813 RNF20Q5VTR2 975 aa11.28□□□□□ -0.6
VNN3-214ENST00000580813 VWA5B2Q8N398 1253 aa11.28□□□□□ -0.6
VNN3-214ENST00000580813 NANOS1Q8WY41 292 aaKnown RBP11.28□□□□□ -0.6
VNN3-214ENST00000580813 APBB1O00213 710 aa11.27□□□□□ -0.61
VNN3-214ENST00000580813 KRT76Q01546 638 aa11.27□□□□□ -0.61
VNN3-214ENST00000580813 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.61
VNN3-214ENST00000580813 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
VNN3-214ENST00000580813 MCCD1P59942 119 aaPredicted RBP11.26□□□□□ -0.61
VNN3-214ENST00000580813 PRICKLE2Q7Z3G6 844 aa11.26□□□□□ -0.61
VNN3-214ENST00000580813 CCDC125Q86Z20 511 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms