RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SBF2Q86WG5 1849 aa27.78■■■□□ 2.04
NDEL1-209ENST00000580738 RGPD3A6NKT7 1758 aaPredicted RBP27.78■■■□□ 2.04
NDEL1-209ENST00000580738 RGPD4Q7Z3J3 1758 aa27.78■■■□□ 2.04
NDEL1-209ENST00000580738 SLIT3O75094 1523 aa27.77■■■□□ 2.04
NDEL1-209ENST00000580738 ZBTB7AO95365 584 aa27.77■■■□□ 2.04
NDEL1-209ENST00000580738 CASZ1Q86V15 1759 aa27.76■■■□□ 2.03
NDEL1-209ENST00000580738 WDR17Q8IZU2 1322 aa27.75■■■□□ 2.03
NDEL1-209ENST00000580738 PTGER2P43116 358 aa27.73■■■□□ 2.03
NDEL1-209ENST00000580738 ATF5Q9Y2D1 282 aaPredicted RBP27.73■■■□□ 2.03
NDEL1-209ENST00000580738 COL18A1P39060 1754 aa27.73■■■□□ 2.03
NDEL1-209ENST00000580738 UTRNP46939 3433 aa27.71■■■□□ 2.03
NDEL1-209ENST00000580738 BCL9O00512 1426 aa27.7■■■□□ 2.03
NDEL1-209ENST00000580738 CDCA7Q9BWT1 371 aaPredicted RBP27.7■■■□□ 2.02
NDEL1-209ENST00000580738 PIK3C2AO00443 1686 aa27.69■■■□□ 2.02
NDEL1-209ENST00000580738 CPSF1Q10570 1443 aaKnown RBP27.69■■■□□ 2.02
NDEL1-209ENST00000580738 TXNRD1Q16881 649 aa27.69■■■□□ 2.02
NDEL1-209ENST00000580738 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
NDEL1-209ENST00000580738 SOX12O15370 315 aa27.67■■■□□ 2.02
NDEL1-209ENST00000580738 CARD10Q9BWT7 1032 aa27.67■■■□□ 2.02
NDEL1-209ENST00000580738 STK32BQ9NY57 414 aa27.67■■■□□ 2.02
NDEL1-209ENST00000580738 MYOM1P52179 1685 aa27.67■■■□□ 2.02
NDEL1-209ENST00000580738 QRICH2Q9H0J4 1663 aa27.67■■■□□ 2.02
NDEL1-209ENST00000580738 CSB-PGBD3P0DP91 1061 aa27.66■■■□□ 2.02
NDEL1-209ENST00000580738 WNK3Q9BYP7 1800 aa27.66■■■□□ 2.02
NDEL1-209ENST00000580738 SLC15A2Q16348 729 aa27.65■■■□□ 2.02
NDEL1-209ENST00000580738 ZNF784Q8NCA9 323 aaPredicted RBP27.64■■■□□ 2.02
NDEL1-209ENST00000580738 FHDC1Q9C0D6 1143 aaPredicted RBP27.64■■■□□ 2.02
NDEL1-209ENST00000580738 TTC21BQ7Z4L5 1316 aa27.64■■■□□ 2.01
NDEL1-209ENST00000580738 EXOC5O00471 708 aa27.63■■■□□ 2.01
NDEL1-209ENST00000580738 KCNH5Q8NCM2 988 aa27.63■■■□□ 2.01
NDEL1-209ENST00000580738 SYT17Q9BSW7 474 aa27.63■■■□□ 2.01
NDEL1-209ENST00000580738 AKAP12Q02952 1782 aa27.62■■■□□ 2.01
NDEL1-209ENST00000580738 EVC2Q86UK5 1308 aa27.61■■■□□ 2.01
NDEL1-209ENST00000580738 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
NDEL1-209ENST00000580738 SGIP1Q9BQI5 828 aa27.59■■■□□ 2.01
NDEL1-209ENST00000580738 MTFR1LQ9H019 292 aa27.59■■■□□ 2.01
NDEL1-209ENST00000580738 ZNF692Q9BU19 519 aaPredicted RBP27.58■■■□□ 2.01
NDEL1-209ENST00000580738 ACSBG1Q96GR2 724 aa27.56■■■□□ 2
NDEL1-209ENST00000580738 CCDC7Q96M83 1385 aa27.55■■■□□ 2
NDEL1-209ENST00000580738 NFAT5O94916 1531 aa27.55■■■□□ 2
NDEL1-209ENST00000580738 TNS2Q63HR2 1409 aa27.54■■■□□ 2
NDEL1-209ENST00000580738 TTC21AQ8NDW8 1320 aa27.54■■■□□ 2
NDEL1-209ENST00000580738 L3MBTL2Q969R5 705 aa27.53■■■□□ 2
NDEL1-209ENST00000580738 TRPM1Q7Z4N2 1603 aa27.52■■■□□ 2
NDEL1-209ENST00000580738 ARXQ96QS3 562 aa27.5■■□□□ 1.99
NDEL1-209ENST00000580738 KTN1Q86UP2 1357 aaKnown RBP27.49■■□□□ 1.99
NDEL1-209ENST00000580738 NLRP2Q9NX02 1062 aa27.48■■□□□ 1.99
NDEL1-209ENST00000580738 NHSQ6T4R5 1651 aa27.48■■□□□ 1.99
NDEL1-209ENST00000580738 ZNF827Q17R98 1081 aa27.47■■□□□ 1.99
NDEL1-209ENST00000580738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.46■■□□□ 1.99
NDEL1-209ENST00000580738 PAPPAQ13219 1627 aa27.45■■□□□ 1.99
NDEL1-209ENST00000580738 ERBB3P21860 1342 aa27.45■■□□□ 1.99
NDEL1-209ENST00000580738 LRRC4BQ9NT99 713 aa27.45■■□□□ 1.98
NDEL1-209ENST00000580738 ABCC6O95255 1503 aa27.45■■□□□ 1.98
NDEL1-209ENST00000580738 IL2RBP14784 551 aa27.44■■□□□ 1.98
NDEL1-209ENST00000580738 SENP3-EIF4A1A0A087X0R7 540 aa27.43■■□□□ 1.98
NDEL1-209ENST00000580738 C1QTNF8P60827 252 aa27.42■■□□□ 1.98
NDEL1-209ENST00000580738 NME9Q86XW9 330 aa27.42■■□□□ 1.98
NDEL1-209ENST00000580738 ROCK2O75116 1388 aaKnown RBP27.42■■□□□ 1.98
NDEL1-209ENST00000580738 MAP3K5Q99683 1374 aa27.42■■□□□ 1.98
NDEL1-209ENST00000580738 USP31Q70CQ4 1352 aa27.41■■□□□ 1.98
NDEL1-209ENST00000580738 ANKRD24Q8TF21 1146 aa27.39■■□□□ 1.98
NDEL1-209ENST00000580738 CHD4Q14839 1912 aa27.39■■□□□ 1.97
NDEL1-209ENST00000580738 BTAF1O14981 1849 aa27.39■■□□□ 1.97
NDEL1-209ENST00000580738 GPR162Q16538 588 aa27.38■■□□□ 1.97
NDEL1-209ENST00000580738 SIN3AQ96ST3 1273 aa27.38■■□□□ 1.97
NDEL1-209ENST00000580738 AKT1S1Q96B36 256 aa27.37■■□□□ 1.97
NDEL1-209ENST00000580738 MON2Q7Z3U7 1717 aa27.36■■□□□ 1.97
NDEL1-209ENST00000580738 SBNO2Q9Y2G9 1366 aa27.35■■□□□ 1.97
NDEL1-209ENST00000580738 CD163L1Q9NR16 1453 aa27.35■■□□□ 1.97
NDEL1-209ENST00000580738 GOLGB1Q14789 3259 aaKnown RBP27.34■■□□□ 1.97
NDEL1-209ENST00000580738 KLHL34Q8N239 644 aa27.34■■□□□ 1.97
NDEL1-209ENST00000580738 KCNQ4P56696 695 aa27.32■■□□□ 1.96
NDEL1-209ENST00000580738 DDX54Q8TDD1 881 aaKnown RBP27.32■■□□□ 1.96
NDEL1-209ENST00000580738 USP54Q70EL1 1684 aa27.31■■□□□ 1.96
NDEL1-209ENST00000580738 LTN1O94822 1766 aa27.31■■□□□ 1.96
NDEL1-209ENST00000580738 NEUROD1Q13562 356 aa27.31■■□□□ 1.96
NDEL1-209ENST00000580738 SLC16A10Q8TF71 515 aa27.31■■□□□ 1.96
NDEL1-209ENST00000580738 PNPLA7Q6ZV29 1317 aa27.31■■□□□ 1.96
NDEL1-209ENST00000580738 SLC27A3Q5K4L6 730 aa27.3■■□□□ 1.96
NDEL1-209ENST00000580738 PELP1Q8IZL8 1130 aaKnown RBP27.3■■□□□ 1.96
NDEL1-209ENST00000580738 TMC1Q8TDI8 760 aa27.3■■□□□ 1.96
NDEL1-209ENST00000580738 KAT6BQ8WYB5 2073 aa27.29■■□□□ 1.96
NDEL1-209ENST00000580738 POLD1P28340 1107 aa27.29■■□□□ 1.96
NDEL1-209ENST00000580738 SLC12A5Q9H2X9 1139 aa27.29■■□□□ 1.96
NDEL1-209ENST00000580738 TFCP2L1Q9NZI6 479 aa27.28■■□□□ 1.96
NDEL1-209ENST00000580738 NLGN2Q8NFZ4 835 aa27.27■■□□□ 1.96
NDEL1-209ENST00000580738 HDGFL2Q7Z4V5 671 aaPredicted RBP27.26■■□□□ 1.95
NDEL1-209ENST00000580738 LTV1Q96GA3 475 aaPredicted RBP27.26■■□□□ 1.95
NDEL1-209ENST00000580738 PRIM1P49642 420 aaKnown RBP27.25■■□□□ 1.95
NDEL1-209ENST00000580738 IP6K1Q92551 441 aa27.25■■□□□ 1.95
NDEL1-209ENST00000580738 SYTL4Q96C24 671 aaPredicted RBP27.25■■□□□ 1.95
NDEL1-209ENST00000580738 GIGYF1O75420 1035 aaPredicted RBP27.24■■□□□ 1.95
NDEL1-209ENST00000580738 EDC4Q6P2E9 1401 aaKnown RBP27.24■■□□□ 1.95
NDEL1-209ENST00000580738 QSER1Q2KHR3 1735 aa27.21■■□□□ 1.95
NDEL1-209ENST00000580738 COL24A1Q17RW2 1714 aa27.21■■□□□ 1.95
NDEL1-209ENST00000580738 A0A1W2PP64 1363 aa27.21■■□□□ 1.95
NDEL1-209ENST00000580738 ANKRD36BQ8N2N9 1353 aa27.2■■□□□ 1.94
NDEL1-209ENST00000580738 CARD11Q9BXL7 1154 aa27.19■■□□□ 1.94
NDEL1-209ENST00000580738 TERF2IPQ9NYB0 399 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms