RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 NFAT5O94916 1531 aa17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 PAK3O75914 559 aaPredicted RBP17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 MTHFSP49914 203 aa17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 LTN1O94822 1766 aa17.48■□□□□ 0.39
CCDC144CP-203ENST00000580574 NLRP6P59044 892 aa17.47■□□□□ 0.39
CCDC144CP-203ENST00000580574 PHRF1Q9P1Y6 1649 aaKnown RBP17.47■□□□□ 0.39
CCDC144CP-203ENST00000580574 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
CCDC144CP-203ENST00000580574 SPATA31A3Q5VYP0 1347 aa17.47■□□□□ 0.39
CCDC144CP-203ENST00000580574 USP19O94966 1318 aa17.46■□□□□ 0.38
CCDC144CP-203ENST00000580574 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
CCDC144CP-203ENST00000580574 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
CCDC144CP-203ENST00000580574 ABCA3Q99758 1704 aa17.44■□□□□ 0.38
CCDC144CP-203ENST00000580574 CERKQ8TCT0 537 aa17.43■□□□□ 0.38
CCDC144CP-203ENST00000580574 EMILIN1Q9Y6C2 1016 aa17.43■□□□□ 0.38
CCDC144CP-203ENST00000580574 COL16A1Q07092 1604 aaPredicted RBP17.42■□□□□ 0.38
CCDC144CP-203ENST00000580574 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
CCDC144CP-203ENST00000580574 TOM1O60784 492 aa17.41■□□□□ 0.38
CCDC144CP-203ENST00000580574 RRS1Q15050 365 aaKnown RBP17.41■□□□□ 0.38
CCDC144CP-203ENST00000580574 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
CCDC144CP-203ENST00000580574 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
CCDC144CP-203ENST00000580574 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
CCDC144CP-203ENST00000580574 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
CCDC144CP-203ENST00000580574 COL22A1Q8NFW1 1626 aaPredicted RBP17.39■□□□□ 0.38
CCDC144CP-203ENST00000580574 COL18A1P39060 1754 aa17.39■□□□□ 0.37
CCDC144CP-203ENST00000580574 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
CCDC144CP-203ENST00000580574 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
CCDC144CP-203ENST00000580574 GCP02774 474 aa17.38■□□□□ 0.37
CCDC144CP-203ENST00000580574 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
CCDC144CP-203ENST00000580574 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
CCDC144CP-203ENST00000580574 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
CCDC144CP-203ENST00000580574 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
CCDC144CP-203ENST00000580574 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
CCDC144CP-203ENST00000580574 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
CCDC144CP-203ENST00000580574 UBAP1LF5GYI3 381 aa17.36■□□□□ 0.37
CCDC144CP-203ENST00000580574 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
CCDC144CP-203ENST00000580574 SOX12O15370 315 aa17.35■□□□□ 0.37
CCDC144CP-203ENST00000580574 ARHGEF25Q86VW2 580 aa17.35■□□□□ 0.37
CCDC144CP-203ENST00000580574 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
CCDC144CP-203ENST00000580574 FLT4P35916 1363 aa17.35■□□□□ 0.37
CCDC144CP-203ENST00000580574 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
CCDC144CP-203ENST00000580574 IL13P35225 146 aa17.34■□□□□ 0.37
CCDC144CP-203ENST00000580574 C19orf67A6NJJ6 358 aa17.33■□□□□ 0.36
CCDC144CP-203ENST00000580574 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
CCDC144CP-203ENST00000580574 HSP90AB2PQ58FF8 381 aa17.33■□□□□ 0.36
CCDC144CP-203ENST00000580574 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
CCDC144CP-203ENST00000580574 ABCC6O95255 1503 aa17.32■□□□□ 0.36
CCDC144CP-203ENST00000580574 HOXC9P31274 260 aa17.32■□□□□ 0.36
CCDC144CP-203ENST00000580574 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC144CP-203ENST00000580574 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
CCDC144CP-203ENST00000580574 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
CCDC144CP-203ENST00000580574 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
CCDC144CP-203ENST00000580574 CPDO75976 1380 aa17.31■□□□□ 0.36
CCDC144CP-203ENST00000580574 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
CCDC144CP-203ENST00000580574 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
CCDC144CP-203ENST00000580574 IP6K1Q92551 441 aa17.31■□□□□ 0.36
CCDC144CP-203ENST00000580574 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
CCDC144CP-203ENST00000580574 AMPHP49418 695 aa17.3■□□□□ 0.36
CCDC144CP-203ENST00000580574 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
CCDC144CP-203ENST00000580574 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
CCDC144CP-203ENST00000580574 U2AF1L5P0DN76 240 aaPredicted RBP17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 U2AF1Q01081 240 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
CCDC144CP-203ENST00000580574 U2SURPO15042 1029 aaKnown RBP17.25■□□□□ 0.35
CCDC144CP-203ENST00000580574 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
CCDC144CP-203ENST00000580574 NCAPD2Q15021 1401 aa17.24■□□□□ 0.35
CCDC144CP-203ENST00000580574 FCHSD2O94868 740 aa17.24■□□□□ 0.35
CCDC144CP-203ENST00000580574 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
CCDC144CP-203ENST00000580574 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
CCDC144CP-203ENST00000580574 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
CCDC144CP-203ENST00000580574 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
CCDC144CP-203ENST00000580574 KDRP35968 1356 aa17.23■□□□□ 0.35
CCDC144CP-203ENST00000580574 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
CCDC144CP-203ENST00000580574 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
CCDC144CP-203ENST00000580574 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
CCDC144CP-203ENST00000580574 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
CCDC144CP-203ENST00000580574 EYA1Q99502 592 aa17.22■□□□□ 0.35
CCDC144CP-203ENST00000580574 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
CCDC144CP-203ENST00000580574 APAF1O14727 1248 aa17.19■□□□□ 0.34
CCDC144CP-203ENST00000580574 HMOX1P09601 288 aa17.19■□□□□ 0.34
CCDC144CP-203ENST00000580574 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
CCDC144CP-203ENST00000580574 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
CCDC144CP-203ENST00000580574 ERBB3P21860 1342 aa17.19■□□□□ 0.34
CCDC144CP-203ENST00000580574 JCADQ9P266 1359 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 PLCH1Q4KWH8 1693 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 SULT6B1Q6IMI4 303 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
CCDC144CP-203ENST00000580574 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms