RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 C1QTNF8P60827 252 aa28.15■■■□□ 2.1
LIMD2-209ENST00000580222 TXNRD1Q16881 649 aa28.15■■■□□ 2.1
LIMD2-209ENST00000580222 RGPD3A6NKT7 1758 aaPredicted RBP28.14■■■□□ 2.1
LIMD2-209ENST00000580222 RGPD4Q7Z3J3 1758 aa28.14■■■□□ 2.1
LIMD2-209ENST00000580222 AATKQ6ZMQ8 1374 aa28.14■■■□□ 2.1
LIMD2-209ENST00000580222 TOM1L2Q6ZVM7 507 aa28.14■■■□□ 2.1
LIMD2-209ENST00000580222 SLC15A2Q16348 729 aa28.13■■■□□ 2.09
LIMD2-209ENST00000580222 SBF2Q86WG5 1849 aa28.13■■■□□ 2.09
LIMD2-209ENST00000580222 STAC3Q96MF2 364 aa28.11■■■□□ 2.09
LIMD2-209ENST00000580222 STK32BQ9NY57 414 aa28.11■■■□□ 2.09
LIMD2-209ENST00000580222 NLRP6P59044 892 aa28.1■■■□□ 2.09
LIMD2-209ENST00000580222 CABP2Q9NPB3 220 aa28.1■■■□□ 2.09
LIMD2-209ENST00000580222 PPIP5K1Q6PFW1 1433 aa28.09■■■□□ 2.09
LIMD2-209ENST00000580222 BCL9O00512 1426 aa28.09■■■□□ 2.09
LIMD2-209ENST00000580222 SRPK2P78362 688 aaKnown RBP28.07■■■□□ 2.08
LIMD2-209ENST00000580222 NBPF1Q3BBV0 1214 aa28.07■■■□□ 2.08
LIMD2-209ENST00000580222 MTFR1LQ9H019 292 aa28.07■■■□□ 2.08
LIMD2-209ENST00000580222 WDR17Q8IZU2 1322 aa28.07■■■□□ 2.08
LIMD2-209ENST00000580222 CEP350Q5VT06 3117 aa28.05■■■□□ 2.08
LIMD2-209ENST00000580222 CABP1Q9NZU7 370 aa28.05■■■□□ 2.08
LIMD2-209ENST00000580222 SLIT3O75094 1523 aa28.04■■■□□ 2.08
LIMD2-209ENST00000580222 COL18A1P39060 1754 aa28.03■■■□□ 2.08
LIMD2-209ENST00000580222 ARXQ96QS3 562 aa28.02■■■□□ 2.08
LIMD2-209ENST00000580222 USP6P35125 1406 aa28.01■■■□□ 2.08
LIMD2-209ENST00000580222 GOLGB1Q14789 3259 aaKnown RBP28■■■□□ 2.07
LIMD2-209ENST00000580222 IFFO2Q5TF58 517 aa28■■■□□ 2.07
LIMD2-209ENST00000580222 ARHGEF25Q86VW2 580 aa28■■■□□ 2.07
LIMD2-209ENST00000580222 CDCA7Q9BWT1 371 aaPredicted RBP28■■■□□ 2.07
LIMD2-209ENST00000580222 CARD10Q9BWT7 1032 aa28■■■□□ 2.07
LIMD2-209ENST00000580222 BRD4O60885 1362 aaPredicted RBP27.99■■■□□ 2.07
LIMD2-209ENST00000580222 EXOC5O00471 708 aa27.97■■■□□ 2.07
LIMD2-209ENST00000580222 CPSF1Q10570 1443 aaKnown RBP27.96■■■□□ 2.07
LIMD2-209ENST00000580222 ACSBG1Q96GR2 724 aa27.96■■■□□ 2.07
LIMD2-209ENST00000580222 SOX12O15370 315 aa27.95■■■□□ 2.06
LIMD2-209ENST00000580222 ZNF827Q17R98 1081 aa27.95■■■□□ 2.06
LIMD2-209ENST00000580222 CSB-PGBD3P0DP91 1061 aa27.94■■■□□ 2.06
LIMD2-209ENST00000580222 CENPJQ9HC77 1338 aaPredicted RBP27.93■■■□□ 2.06
LIMD2-209ENST00000580222 MAP3K5Q99683 1374 aa27.93■■■□□ 2.06
LIMD2-209ENST00000580222 WNK3Q9BYP7 1800 aa27.92■■■□□ 2.06
LIMD2-209ENST00000580222 PIK3C2AO00443 1686 aa27.91■■■□□ 2.06
LIMD2-209ENST00000580222 GPR162Q16538 588 aa27.91■■■□□ 2.06
LIMD2-209ENST00000580222 LRRC4BQ9NT99 713 aa27.91■■■□□ 2.06
LIMD2-209ENST00000580222 TTC21BQ7Z4L5 1316 aa27.89■■■□□ 2.05
LIMD2-209ENST00000580222 CHD4Q14839 1912 aa27.87■■■□□ 2.05
LIMD2-209ENST00000580222 AKAP12Q02952 1782 aa27.87■■■□□ 2.05
LIMD2-209ENST00000580222 GIGYF1O75420 1035 aaPredicted RBP27.87■■■□□ 2.05
LIMD2-209ENST00000580222 PAPPAQ13219 1627 aa27.87■■■□□ 2.05
LIMD2-209ENST00000580222 TNS2Q63HR2 1409 aa27.86■■■□□ 2.05
LIMD2-209ENST00000580222 KCNH5Q8NCM2 988 aa27.84■■■□□ 2.05
LIMD2-209ENST00000580222 CCDC7Q96M83 1385 aa27.84■■■□□ 2.05
LIMD2-209ENST00000580222 KLHL34Q8N239 644 aa27.83■■■□□ 2.05
LIMD2-209ENST00000580222 AKT1S1Q96B36 256 aa27.83■■■□□ 2.05
LIMD2-209ENST00000580222 RGPD5Q99666 1765 aa27.83■■■□□ 2.05
LIMD2-209ENST00000580222 KIAA1210Q9ULL0 1709 aa27.82■■■□□ 2.04
LIMD2-209ENST00000580222 PELP1Q8IZL8 1130 aaKnown RBP27.82■■■□□ 2.04
LIMD2-209ENST00000580222 NLGN2Q8NFZ4 835 aa27.82■■■□□ 2.04
LIMD2-209ENST00000580222 NHSQ6T4R5 1651 aa27.81■■■□□ 2.04
LIMD2-209ENST00000580222 NFAT5O94916 1531 aa27.8■■■□□ 2.04
LIMD2-209ENST00000580222 TRPM1Q7Z4N2 1603 aa27.8■■■□□ 2.04
LIMD2-209ENST00000580222 KCNQ4P56696 695 aa27.77■■■□□ 2.04
LIMD2-209ENST00000580222 NLRP2Q9NX02 1062 aa27.77■■■□□ 2.04
LIMD2-209ENST00000580222 PNPLA7Q6ZV29 1317 aa27.76■■■□□ 2.03
LIMD2-209ENST00000580222 ZNF692Q9BU19 519 aaPredicted RBP27.76■■■□□ 2.03
LIMD2-209ENST00000580222 YBX3P16989 372 aaKnown RBP eCLIP27.75■■■□□ 2.03
LIMD2-209ENST00000580222 ABCC6O95255 1503 aa27.75■■■□□ 2.03
LIMD2-209ENST00000580222 SHANK3Q9BYB0 1731 aa27.75■■■□□ 2.03
LIMD2-209ENST00000580222 QRICH2Q9H0J4 1663 aa27.75■■■□□ 2.03
LIMD2-209ENST00000580222 ERBB3P21860 1342 aa27.73■■■□□ 2.03
LIMD2-209ENST00000580222 EVC2Q86UK5 1308 aa27.73■■■□□ 2.03
LIMD2-209ENST00000580222 TTC21AQ8NDW8 1320 aa27.73■■■□□ 2.03
LIMD2-209ENST00000580222 IL2RBP14784 551 aa27.73■■■□□ 2.03
LIMD2-209ENST00000580222 SLC16A10Q8TF71 515 aa27.73■■■□□ 2.03
LIMD2-209ENST00000580222 POLD1P28340 1107 aa27.71■■■□□ 2.03
LIMD2-209ENST00000580222 BTAF1O14981 1849 aa27.71■■■□□ 2.03
LIMD2-209ENST00000580222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.67■■■□□ 2.02
LIMD2-209ENST00000580222 ANKRD24Q8TF21 1146 aa27.67■■■□□ 2.02
LIMD2-209ENST00000580222 KTN1Q86UP2 1357 aaKnown RBP27.67■■■□□ 2.02
LIMD2-209ENST00000580222 SLC27A3Q5K4L6 730 aa27.66■■■□□ 2.02
LIMD2-209ENST00000580222 TFCP2L1Q9NZI6 479 aa27.66■■■□□ 2.02
LIMD2-209ENST00000580222 NME9Q86XW9 330 aa27.65■■■□□ 2.02
LIMD2-209ENST00000580222 DDX54Q8TDD1 881 aaKnown RBP27.65■■■□□ 2.02
LIMD2-209ENST00000580222 USP31Q70CQ4 1352 aa27.63■■■□□ 2.01
LIMD2-209ENST00000580222 COL24A1Q17RW2 1714 aa27.63■■■□□ 2.01
LIMD2-209ENST00000580222 ATP10DQ9P241 1426 aa27.61■■■□□ 2.01
LIMD2-209ENST00000580222 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
LIMD2-209ENST00000580222 GRIN3BO60391 1043 aa27.6■■■□□ 2.01
LIMD2-209ENST00000580222 L3MBTL2Q969R5 705 aa27.59■■■□□ 2.01
LIMD2-209ENST00000580222 COL23A1Q86Y22 540 aaPredicted RBP27.58■■■□□ 2.01
LIMD2-209ENST00000580222 NSD2O96028 1365 aa27.58■■■□□ 2.01
LIMD2-209ENST00000580222 SYTL4Q96C24 671 aaPredicted RBP27.57■■■□□ 2
LIMD2-209ENST00000580222 SBNO2Q9Y2G9 1366 aa27.57■■■□□ 2
LIMD2-209ENST00000580222 MSL1Q68DK7 614 aa27.56■■■□□ 2
LIMD2-209ENST00000580222 QSER1Q2KHR3 1735 aa27.55■■■□□ 2
LIMD2-209ENST00000580222 TUBGCP6Q96RT7 1819 aa27.55■■■□□ 2
LIMD2-209ENST00000580222 CD163L1Q9NR16 1453 aa27.54■■■□□ 2
LIMD2-209ENST00000580222 MSH5O43196 834 aa27.53■■■□□ 2
LIMD2-209ENST00000580222 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
LIMD2-209ENST00000580222 LTV1Q96GA3 475 aaPredicted RBP27.53■■■□□ 2
LIMD2-209ENST00000580222 ANKRD36BQ8N2N9 1353 aa27.51■■□□□ 1.99
LIMD2-209ENST00000580222 HSPA6P17066 643 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms