RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-208ENST00000580218 AXIN2Q9Y2T1 843 aa18.66■□□□□ 0.58
DHX40-208ENST00000580218 GJD4Q96KN9 370 aaPredicted RBP18.65■□□□□ 0.58
DHX40-208ENST00000580218 FAM208AQ9UK61 1670 aaKnown RBP18.64■□□□□ 0.57
DHX40-208ENST00000580218 PARP4Q9UKK3 1724 aaKnown RBP18.64■□□□□ 0.57
DHX40-208ENST00000580218 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
DHX40-208ENST00000580218 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
DHX40-208ENST00000580218 SPATA31A5Q5VU36 1347 aa18.64■□□□□ 0.57
DHX40-208ENST00000580218 SPATA31A7Q8IWB4 1347 aa18.64■□□□□ 0.57
DHX40-208ENST00000580218 RGPD2P0DJD1 1756 aa18.63■□□□□ 0.57
DHX40-208ENST00000580218 LRRC37A3O60309 1634 aa18.63■□□□□ 0.57
DHX40-208ENST00000580218 SOX12O15370 315 aa18.62■□□□□ 0.57
DHX40-208ENST00000580218 FBLN1P23142 703 aa18.62■□□□□ 0.57
DHX40-208ENST00000580218 PANK3Q9H999 370 aa18.62■□□□□ 0.57
DHX40-208ENST00000580218 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
DHX40-208ENST00000580218 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
DHX40-208ENST00000580218 ONECUT3O60422 494 aaPredicted RBP18.61■□□□□ 0.57
DHX40-208ENST00000580218 POLR3GLQ9BT43 218 aa18.61■□□□□ 0.57
DHX40-208ENST00000580218 CRB1P82279 1406 aa18.6■□□□□ 0.57
DHX40-208ENST00000580218 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
DHX40-208ENST00000580218 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
DHX40-208ENST00000580218 SOCS7O14512 581 aa18.59■□□□□ 0.57
DHX40-208ENST00000580218 BLMP54132 1417 aaPredicted RBP18.58■□□□□ 0.57
DHX40-208ENST00000580218 PER1O15534 1290 aaPredicted RBP18.58■□□□□ 0.56
DHX40-208ENST00000580218 COG3Q96JB2 828 aa18.58■□□□□ 0.56
DHX40-208ENST00000580218 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
DHX40-208ENST00000580218 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
DHX40-208ENST00000580218 RTL1A6NKG5 1358 aa18.57■□□□□ 0.56
DHX40-208ENST00000580218 ERBB3P21860 1342 aa18.57■□□□□ 0.56
DHX40-208ENST00000580218 CGNL1Q0VF96 1302 aa18.57■□□□□ 0.56
DHX40-208ENST00000580218 WDR17Q8IZU2 1322 aa18.57■□□□□ 0.56
DHX40-208ENST00000580218 NSD2O96028 1365 aa18.56■□□□□ 0.56
DHX40-208ENST00000580218 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
DHX40-208ENST00000580218 STRN4Q9NRL3 753 aa18.56■□□□□ 0.56
DHX40-208ENST00000580218 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
DHX40-208ENST00000580218 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
DHX40-208ENST00000580218 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
DHX40-208ENST00000580218 FAM98CQ17RN3 349 aaKnown RBP18.53■□□□□ 0.56
DHX40-208ENST00000580218 HOXC9P31274 260 aa18.52■□□□□ 0.56
DHX40-208ENST00000580218 IP6K1Q92551 441 aa18.52■□□□□ 0.56
DHX40-208ENST00000580218 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.55
DHX40-208ENST00000580218 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
DHX40-208ENST00000580218 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
DHX40-208ENST00000580218 SEPT12Q8IYM1 358 aa18.51■□□□□ 0.55
DHX40-208ENST00000580218 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
DHX40-208ENST00000580218 RGPD1P0DJD0 1748 aa18.5■□□□□ 0.55
DHX40-208ENST00000580218 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
DHX40-208ENST00000580218 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
DHX40-208ENST00000580218 FLT4P35916 1363 aa18.5■□□□□ 0.55
DHX40-208ENST00000580218 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
DHX40-208ENST00000580218 INSRP06213 1382 aa18.49■□□□□ 0.55
DHX40-208ENST00000580218 TCP11L2Q8N4U5 519 aa18.48■□□□□ 0.55
DHX40-208ENST00000580218 ANKRD24Q8TF21 1146 aa18.48■□□□□ 0.55
DHX40-208ENST00000580218 SBF2Q86WG5 1849 aa18.47■□□□□ 0.55
DHX40-208ENST00000580218 EVA1CP58658 441 aa18.47■□□□□ 0.55
DHX40-208ENST00000580218 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
DHX40-208ENST00000580218 USP35Q9P2H5 1018 aa18.47■□□□□ 0.55
DHX40-208ENST00000580218 POLKQ9UBT6 870 aa18.47■□□□□ 0.55
DHX40-208ENST00000580218 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
DHX40-208ENST00000580218 MEGF6O75095 1541 aa18.45■□□□□ 0.54
DHX40-208ENST00000580218 HSP90AB2PQ58FF8 381 aa18.45■□□□□ 0.54
DHX40-208ENST00000580218 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
DHX40-208ENST00000580218 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
DHX40-208ENST00000580218 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
DHX40-208ENST00000580218 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
DHX40-208ENST00000580218 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
DHX40-208ENST00000580218 KNSTRNQ9Y448 316 aa18.44■□□□□ 0.54
DHX40-208ENST00000580218 COL3A1P02461 1466 aaPredicted RBP18.44■□□□□ 0.54
DHX40-208ENST00000580218 AMPHP49418 695 aa18.41■□□□□ 0.54
DHX40-208ENST00000580218 KRT27Q7Z3Y8 459 aa18.41■□□□□ 0.54
DHX40-208ENST00000580218 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
DHX40-208ENST00000580218 FAM182BQ5T319 152 aa18.4■□□□□ 0.54
DHX40-208ENST00000580218 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
DHX40-208ENST00000580218 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
DHX40-208ENST00000580218 LTV1Q96GA3 475 aaPredicted RBP18.39■□□□□ 0.53
DHX40-208ENST00000580218 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
DHX40-208ENST00000580218 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
DHX40-208ENST00000580218 MORC1Q86VD1 984 aa18.38■□□□□ 0.53
DHX40-208ENST00000580218 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
DHX40-208ENST00000580218 BCL9O00512 1426 aa18.38■□□□□ 0.53
DHX40-208ENST00000580218 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
DHX40-208ENST00000580218 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
DHX40-208ENST00000580218 TOGARAM1Q9Y4F4 1720 aa18.36■□□□□ 0.53
DHX40-208ENST00000580218 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
DHX40-208ENST00000580218 A0A0G2JS52 829 aa18.35■□□□□ 0.53
DHX40-208ENST00000580218 MYT1Q01538 1121 aa18.35■□□□□ 0.53
DHX40-208ENST00000580218 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
DHX40-208ENST00000580218 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
DHX40-208ENST00000580218 RREB1Q92766 1687 aa18.34■□□□□ 0.53
DHX40-208ENST00000580218 PARD3Q8TEW0 1356 aa18.34■□□□□ 0.53
DHX40-208ENST00000580218 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
DHX40-208ENST00000580218 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
DHX40-208ENST00000580218 CDCA7Q9BWT1 371 aaPredicted RBP18.34■□□□□ 0.53
DHX40-208ENST00000580218 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
DHX40-208ENST00000580218 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
DHX40-208ENST00000580218 IGSF1Q8N6C5 1336 aa18.33■□□□□ 0.53
DHX40-208ENST00000580218 IL2RBP14784 551 aa18.33■□□□□ 0.52
DHX40-208ENST00000580218 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
DHX40-208ENST00000580218 DDB1Q16531 1140 aa18.32■□□□□ 0.52
DHX40-208ENST00000580218 EYA1Q99502 592 aa18.32■□□□□ 0.52
DHX40-208ENST00000580218 BTAF1O14981 1849 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms