RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CPSF1Q10570 1443 aaKnown RBP19.13■□□□□ 0.65
TRAF4-214ENST00000580073 LTN1O94822 1766 aa19.11■□□□□ 0.65
TRAF4-214ENST00000580073 KCNH5Q8NCM2 988 aa19.11■□□□□ 0.65
TRAF4-214ENST00000580073 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
TRAF4-214ENST00000580073 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
TRAF4-214ENST00000580073 TTC21AQ8NDW8 1320 aa19.1■□□□□ 0.65
TRAF4-214ENST00000580073 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
TRAF4-214ENST00000580073 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
TRAF4-214ENST00000580073 CDCA7Q9BWT1 371 aaPredicted RBP19.09■□□□□ 0.65
TRAF4-214ENST00000580073 TOM1L2Q6ZVM7 507 aa19.08■□□□□ 0.64
TRAF4-214ENST00000580073 SBNO2Q9Y2G9 1366 aa19.07■□□□□ 0.64
TRAF4-214ENST00000580073 WDR17Q8IZU2 1322 aa19.07■□□□□ 0.64
TRAF4-214ENST00000580073 NFAT5O94916 1531 aa19.07■□□□□ 0.64
TRAF4-214ENST00000580073 DDB1Q16531 1140 aa19.07■□□□□ 0.64
TRAF4-214ENST00000580073 FAM208AQ9UK61 1670 aaKnown RBP19.07■□□□□ 0.64
TRAF4-214ENST00000580073 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
TRAF4-214ENST00000580073 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
TRAF4-214ENST00000580073 BCL9O00512 1426 aa19.04■□□□□ 0.64
TRAF4-214ENST00000580073 NHSQ6T4R5 1651 aa19.03■□□□□ 0.64
TRAF4-214ENST00000580073 CASZ1Q86V15 1759 aa19.03■□□□□ 0.64
TRAF4-214ENST00000580073 CCDC7Q96M83 1385 aa19.03■□□□□ 0.64
TRAF4-214ENST00000580073 CSB-PGBD3P0DP91 1061 aa19.01■□□□□ 0.63
TRAF4-214ENST00000580073 TNS2Q63HR2 1409 aa19■□□□□ 0.63
TRAF4-214ENST00000580073 PLSCR1O15162 318 aa19■□□□□ 0.63
TRAF4-214ENST00000580073 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
TRAF4-214ENST00000580073 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
TRAF4-214ENST00000580073 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
TRAF4-214ENST00000580073 PPP1R1BQ9UD71 204 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-214ENST00000580073 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
TRAF4-214ENST00000580073 SIN3AQ96ST3 1273 aa18.98■□□□□ 0.63
TRAF4-214ENST00000580073 BCL11BQ9C0K0 894 aaPredicted RBP18.98■□□□□ 0.63
TRAF4-214ENST00000580073 SPON1Q9HCB6 807 aa18.98■□□□□ 0.63
TRAF4-214ENST00000580073 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
TRAF4-214ENST00000580073 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
TRAF4-214ENST00000580073 USP31Q70CQ4 1352 aa18.96■□□□□ 0.63
TRAF4-214ENST00000580073 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
TRAF4-214ENST00000580073 EDC4Q6P2E9 1401 aaKnown RBP18.95■□□□□ 0.62
TRAF4-214ENST00000580073 SOX12O15370 315 aa18.95■□□□□ 0.62
TRAF4-214ENST00000580073 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
TRAF4-214ENST00000580073 AXIN2Q9Y2T1 843 aa18.95■□□□□ 0.62
TRAF4-214ENST00000580073 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
TRAF4-214ENST00000580073 BTAF1O14981 1849 aa18.94■□□□□ 0.62
TRAF4-214ENST00000580073 EXOC5O00471 708 aa18.93■□□□□ 0.62
TRAF4-214ENST00000580073 KCNQ2O43526 872 aa18.93■□□□□ 0.62
TRAF4-214ENST00000580073 CD163L1Q9NR16 1453 aa18.91■□□□□ 0.62
TRAF4-214ENST00000580073 MARCH10Q8NA82 808 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-214ENST00000580073 TERF2IPQ9NYB0 399 aa18.91■□□□□ 0.62
TRAF4-214ENST00000580073 ERBB3P21860 1342 aa18.91■□□□□ 0.62
TRAF4-214ENST00000580073 MYOM1P52179 1685 aa18.91■□□□□ 0.62
TRAF4-214ENST00000580073 QSER1Q2KHR3 1735 aa18.91■□□□□ 0.62
TRAF4-214ENST00000580073 SLC24A1O60721 1099 aa18.89■□□□□ 0.61
TRAF4-214ENST00000580073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRAF4-214ENST00000580073 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
TRAF4-214ENST00000580073 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
TRAF4-214ENST00000580073 STK32BQ9NY57 414 aa18.88■□□□□ 0.61
TRAF4-214ENST00000580073 PAPPAQ13219 1627 aa18.88■□□□□ 0.61
TRAF4-214ENST00000580073 CHD4Q14839 1912 aa18.86■□□□□ 0.61
TRAF4-214ENST00000580073 KIF20BQ96Q89 1820 aa18.86■□□□□ 0.61
TRAF4-214ENST00000580073 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
TRAF4-214ENST00000580073 IL2RBP14784 551 aa18.86■□□□□ 0.61
TRAF4-214ENST00000580073 NLRP2Q9NX02 1062 aa18.86■□□□□ 0.61
TRAF4-214ENST00000580073 NME9Q86XW9 330 aa18.85■□□□□ 0.61
TRAF4-214ENST00000580073 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
TRAF4-214ENST00000580073 DOT1LQ8TEK3 1739 aa18.85■□□□□ 0.61
TRAF4-214ENST00000580073 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
TRAF4-214ENST00000580073 YY1P25490 414 aa18.83■□□□□ 0.6
TRAF4-214ENST00000580073 ANKRD24Q8TF21 1146 aa18.83■□□□□ 0.6
TRAF4-214ENST00000580073 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
TRAF4-214ENST00000580073 SHANK3Q9BYB0 1731 aa18.81■□□□□ 0.6
TRAF4-214ENST00000580073 LY75O60449 1722 aa18.8■□□□□ 0.6
TRAF4-214ENST00000580073 SLC15A2Q16348 729 aa18.8■□□□□ 0.6
TRAF4-214ENST00000580073 PTF1AQ7RTS3 328 aa18.79■□□□□ 0.6
TRAF4-214ENST00000580073 SLC12A5Q9H2X9 1139 aa18.79■□□□□ 0.6
TRAF4-214ENST00000580073 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
TRAF4-214ENST00000580073 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
TRAF4-214ENST00000580073 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
TRAF4-214ENST00000580073 COG3Q96JB2 828 aa18.78■□□□□ 0.6
TRAF4-214ENST00000580073 MTFR1LQ9H019 292 aa18.78■□□□□ 0.6
TRAF4-214ENST00000580073 ZBTB7AO95365 584 aa18.77■□□□□ 0.6
TRAF4-214ENST00000580073 PROM2Q8N271 834 aa18.77■□□□□ 0.6
TRAF4-214ENST00000580073 ANKRD36BQ8N2N9 1353 aa18.77■□□□□ 0.6
TRAF4-214ENST00000580073 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.59
TRAF4-214ENST00000580073 IP6K1Q92551 441 aa18.76■□□□□ 0.59
TRAF4-214ENST00000580073 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
TRAF4-214ENST00000580073 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-214ENST00000580073 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
TRAF4-214ENST00000580073 AMPHP49418 695 aa18.72■□□□□ 0.59
TRAF4-214ENST00000580073 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
TRAF4-214ENST00000580073 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
TRAF4-214ENST00000580073 PTGER2P43116 358 aa18.71■□□□□ 0.59
TRAF4-214ENST00000580073 TESK2Q96S53 571 aa18.71■□□□□ 0.59
TRAF4-214ENST00000580073 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
TRAF4-214ENST00000580073 C5P01031 1676 aa18.7■□□□□ 0.58
TRAF4-214ENST00000580073 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
TRAF4-214ENST00000580073 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
TRAF4-214ENST00000580073 TMF1P82094 1093 aa18.7■□□□□ 0.58
TRAF4-214ENST00000580073 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
TRAF4-214ENST00000580073 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-214ENST00000580073 PDGFDQ9GZP0 370 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-214ENST00000580073 CGNL1Q0VF96 1302 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms