RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
CDH8-206ENST00000580044 NPAS3Q8IXF0 933 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 ARMC2Q8NEN0 867 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 IRF7Q92985 503 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 AK7Q96M32 723 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 TBC1D2Q9BYX2 928 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
CDH8-206ENST00000580044 IGF1RP08069 1367 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 CARMIL1Q5VZK9 1371 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
CDH8-206ENST00000580044 UPP2O95045 317 aa7.52□□□□□ -1.21
CDH8-206ENST00000580044 ARID5BQ14865 1188 aa7.52□□□□□ -1.21
CDH8-206ENST00000580044 MPNDQ8N594 471 aa7.52□□□□□ -1.21
CDH8-206ENST00000580044 TSC1Q92574 1164 aa7.52□□□□□ -1.21
CDH8-206ENST00000580044 ABCA10Q8WWZ4 1543 aa7.52□□□□□ -1.21
CDH8-206ENST00000580044 CASKIN1Q8WXD9 1431 aa7.52□□□□□ -1.21
CDH8-206ENST00000580044 NNTQ13423 1086 aa7.51□□□□□ -1.21
CDH8-206ENST00000580044 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
CDH8-206ENST00000580044 PRPF38BQ5VTL8 546 aaKnown RBP7.51□□□□□ -1.21
CDH8-206ENST00000580044 RSBN1LQ6PCB5 846 aaPredicted RBP7.51□□□□□ -1.21
CDH8-206ENST00000580044 ADH1CP00326 375 aa7.5□□□□□ -1.21
CDH8-206ENST00000580044 LYPD8Q6UX82 237 aa7.5□□□□□ -1.21
CDH8-206ENST00000580044 RIC3Q7Z5B4 369 aa7.5□□□□□ -1.21
CDH8-206ENST00000580044 BPHLQ86WA6 291 aaPredicted RBP7.5□□□□□ -1.21
CDH8-206ENST00000580044 SUPT16HQ9Y5B9 1047 aaKnown RBP7.5□□□□□ -1.21
CDH8-206ENST00000580044 FMN1Q68DA7 1419 aa7.5□□□□□ -1.21
CDH8-206ENST00000580044 SAMD9Q5K651 1589 aa7.5□□□□□ -1.21
CDH8-206ENST00000580044 BMP1P13497 986 aa7.49□□□□□ -1.21
CDH8-206ENST00000580044 HELBQ8NG08 1087 aaPredicted RBP7.49□□□□□ -1.21
CDH8-206ENST00000580044 SUPT6HQ7KZ85 1726 aaKnown RBP7.49□□□□□ -1.21
CDH8-206ENST00000580044 GCC2Q8IWJ2 1684 aa7.48□□□□□ -1.21
CDH8-206ENST00000580044 SPTLC1O15269 473 aa7.48□□□□□ -1.21
CDH8-206ENST00000580044 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
CDH8-206ENST00000580044 CSPP1Q1MSJ5 1256 aa7.48□□□□□ -1.21
CDH8-206ENST00000580044 ATP1B4Q9UN42 357 aaPredicted RBP7.48□□□□□ -1.21
CDH8-206ENST00000580044 TLL2Q9Y6L7 1015 aa7.48□□□□□ -1.21
CDH8-206ENST00000580044 FANCD2Q9BXW9 1451 aa7.48□□□□□ -1.21
CDH8-206ENST00000580044 PHLDB1Q86UU1 1377 aa7.47□□□□□ -1.21
CDH8-206ENST00000580044 TRIM66O15016 1216 aa7.47□□□□□ -1.21
CDH8-206ENST00000580044 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
CDH8-206ENST00000580044 NR5A1Q13285 461 aa7.47□□□□□ -1.21
CDH8-206ENST00000580044 MRPL14Q6P1L8 145 aaKnown RBP7.47□□□□□ -1.21
CDH8-206ENST00000580044 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
CDH8-206ENST00000580044 EHBP1L1Q8N3D4 1523 aa7.47□□□□□ -1.21
CDH8-206ENST00000580044 HECW1Q76N89 1606 aa7.46□□□□□ -1.21
CDH8-206ENST00000580044 ABCA5Q8WWZ7 1642 aa7.46□□□□□ -1.21
CDH8-206ENST00000580044 PTPN23Q9H3S7 1636 aa7.46□□□□□ -1.21
CDH8-206ENST00000580044 CCER2I3L3R5 266 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 NBPF14Q5TI25 921 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 TRIM46Q7Z4K8 759 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 PARP9Q8IXQ6 854 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 TOPBP1Q92547 1522 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 LAMC3Q9Y6N6 1575 aa7.46□□□□□ -1.22
CDH8-206ENST00000580044 HFM1A2PYH4 1435 aa7.45□□□□□ -1.22
CDH8-206ENST00000580044 SNAPC4Q5SXM2 1469 aa7.45□□□□□ -1.22
CDH8-206ENST00000580044 PCDHB15Q9Y5E8 787 aa7.45□□□□□ -1.22
CDH8-206ENST00000580044 FGD6Q6ZV73 1430 aa7.44□□□□□ -1.22
CDH8-206ENST00000580044 UACAQ9BZF9 1416 aa7.44□□□□□ -1.22
CDH8-206ENST00000580044 LRRIQ1Q96JM4 1722 aa7.44□□□□□ -1.22
CDH8-206ENST00000580044 POLA1P09884 1462 aaPredicted RBP7.44□□□□□ -1.22
CDH8-206ENST00000580044 CCDC18Q5T9S5 1454 aa7.44□□□□□ -1.22
CDH8-206ENST00000580044 MAN1A2O60476 641 aa7.44□□□□□ -1.22
CDH8-206ENST00000580044 PURBQ96QR8 312 aaKnown RBP7.44□□□□□ -1.22
CDH8-206ENST00000580044 CFAP99D6REC4 459 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 ZIC2O95409 532 aaPredicted RBP7.43□□□□□ -1.22
CDH8-206ENST00000580044 NEFLP07196 543 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 ITGAEP38570 1179 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 CDK15Q96Q40 435 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 POLR1AO95602 1720 aaPredicted RBP7.43□□□□□ -1.22
CDH8-206ENST00000580044 TONSLQ96HA7 1378 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 FHOD3Q2V2M9 1422 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 AKNAQ7Z591 1439 aa7.43□□□□□ -1.22
CDH8-206ENST00000580044 BMP2P12643 396 aa7.42□□□□□ -1.22
CDH8-206ENST00000580044 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
CDH8-206ENST00000580044 MAP10Q9P2G4 905 aa7.42□□□□□ -1.22
CDH8-206ENST00000580044 MYOM3Q5VTT5 1437 aa7.42□□□□□ -1.22
CDH8-206ENST00000580044 GRIN2BQ13224 1484 aa7.42□□□□□ -1.22
CDH8-206ENST00000580044 H3BM21 787 aa7.41□□□□□ -1.22
CDH8-206ENST00000580044 ANP32CO43423 234 aa7.41□□□□□ -1.22
CDH8-206ENST00000580044 TIMP2P16035 220 aa7.41□□□□□ -1.22
CDH8-206ENST00000580044 PDE4DQ08499 809 aa7.41□□□□□ -1.22
CDH8-206ENST00000580044 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
CDH8-206ENST00000580044 VASH1Q7L8A9 365 aaPredicted RBP7.41□□□□□ -1.22
CDH8-206ENST00000580044 FOXJ1Q92949 421 aa7.41□□□□□ -1.22
CDH8-206ENST00000580044 GMPRP36959 345 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 VEGFBP49765 207 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 C6orf118Q5T5N4 469 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 CABLES1Q8TDN4 633 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 GPKOWQ92917 476 aaPredicted RBP eCLIP7.4□□□□□ -1.22
CDH8-206ENST00000580044 EMILIN1Q9Y6C2 1016 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 ARHGEF11O15085 1522 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 UGGT2Q9NYU1 1516 aa7.4□□□□□ -1.22
CDH8-206ENST00000580044 PBRM1Q86U86 1689 aa7.39□□□□□ -1.23
CDH8-206ENST00000580044 TCOF1Q13428 1488 aaKnown RBP7.39□□□□□ -1.23
CDH8-206ENST00000580044 MTUS2Q5JR59 1369 aa7.39□□□□□ -1.23
CDH8-206ENST00000580044 MAGEB6P1A0A0J9YX57 407 aa7.39□□□□□ -1.23
CDH8-206ENST00000580044 PPP1R15AO75807 674 aaPredicted RBP7.39□□□□□ -1.23
CDH8-206ENST00000580044 F12P00748 615 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms