RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 CRB1P82279 1406 aa36.46■■■■□ 3.43
LIMD2-208ENST00000579814 CSB-PGBD3P0DP91 1061 aa36.45■■■■□ 3.43
LIMD2-208ENST00000579814 HSPA5P11021 654 aaKnown RBP36.45■■■■□ 3.43
LIMD2-208ENST00000579814 SF3B2Q13435 895 aaKnown RBP36.45■■■■□ 3.43
LIMD2-208ENST00000579814 WDR17Q8IZU2 1322 aa36.44■■■■□ 3.42
LIMD2-208ENST00000579814 BLMP54132 1417 aaPredicted RBP36.43■■■■□ 3.42
LIMD2-208ENST00000579814 NFAT5O94916 1531 aa36.43■■■■□ 3.42
LIMD2-208ENST00000579814 PDE3BQ13370 1112 aa36.42■■■■□ 3.42
LIMD2-208ENST00000579814 OVOS2A0A0J9YW53 1432 aa36.41■■■■□ 3.42
LIMD2-208ENST00000579814 OVOS2Q6IE36 1432 aa36.41■■■■□ 3.42
LIMD2-208ENST00000579814 FAM182BQ5T319 152 aa36.4■■■■□ 3.42
LIMD2-208ENST00000579814 BRWD3Q6RI45 1802 aa36.4■■■■□ 3.42
LIMD2-208ENST00000579814 POLR3GLQ9BT43 218 aa36.39■■■■□ 3.42
LIMD2-208ENST00000579814 FYB1O15117 783 aa36.37■■■■□ 3.41
LIMD2-208ENST00000579814 CARD10Q9BWT7 1032 aa36.37■■■■□ 3.41
LIMD2-208ENST00000579814 THSD7AQ9UPZ6 1657 aa36.37■■■■□ 3.41
LIMD2-208ENST00000579814 FAM196AQ6ZSG2 479 aa36.35■■■■□ 3.41
LIMD2-208ENST00000579814 COL18A1P39060 1754 aa36.35■■■■□ 3.41
LIMD2-208ENST00000579814 EP400Q96L91 3159 aa36.34■■■■□ 3.41
LIMD2-208ENST00000579814 GGNBP2Q9H3C7 697 aa36.34■■■■□ 3.41
LIMD2-208ENST00000579814 CDCA7Q9BWT1 371 aaPredicted RBP36.33■■■■□ 3.41
LIMD2-208ENST00000579814 CARD14Q9BXL6 1004 aa36.32■■■■□ 3.4
LIMD2-208ENST00000579814 USP54Q70EL1 1684 aa36.32■■■■□ 3.4
LIMD2-208ENST00000579814 ABCC6O95255 1503 aa36.31■■■■□ 3.4
LIMD2-208ENST00000579814 DEFB132Q7Z7B7 95 aa36.3■■■■□ 3.4
LIMD2-208ENST00000579814 IP6K1Q92551 441 aa36.3■■■■□ 3.4
LIMD2-208ENST00000579814 ERBB3P21860 1342 aa36.29■■■■□ 3.4
LIMD2-208ENST00000579814 DDB1Q16531 1140 aa36.28■■■■□ 3.4
LIMD2-208ENST00000579814 ANKRD24Q8TF21 1146 aa36.28■■■■□ 3.4
LIMD2-208ENST00000579814 NLRP2Q9NX02 1062 aa36.27■■■■□ 3.4
LIMD2-208ENST00000579814 CCDC7Q96M83 1385 aa36.27■■■■□ 3.4
LIMD2-208ENST00000579814 BAG6P46379 1132 aa36.26■■■■□ 3.4
LIMD2-208ENST00000579814 AMPHP49418 695 aa36.26■■■■□ 3.4
LIMD2-208ENST00000579814 FBLN1P23142 703 aa36.25■■■■□ 3.39
LIMD2-208ENST00000579814 MAP3K19Q56UN5 1328 aa36.25■■■■□ 3.39
LIMD2-208ENST00000579814 C11orf95C9JLR9 678 aaPredicted RBP36.24■■■■□ 3.39
LIMD2-208ENST00000579814 NSD3Q9BZ95 1437 aa36.23■■■■□ 3.39
LIMD2-208ENST00000579814 TRIM37O94972 964 aa36.22■■■■□ 3.39
LIMD2-208ENST00000579814 HOXC9P31274 260 aa36.2■■■■□ 3.39
LIMD2-208ENST00000579814 CGNL1Q0VF96 1302 aa36.19■■■■□ 3.38
LIMD2-208ENST00000579814 EXOC5O00471 708 aa36.19■■■■□ 3.38
LIMD2-208ENST00000579814 LTV1Q96GA3 475 aaPredicted RBP36.19■■■■□ 3.38
LIMD2-208ENST00000579814 RRS1Q15050 365 aaKnown RBP36.18■■■■□ 3.38
LIMD2-208ENST00000579814 PANK3Q9H999 370 aa36.15■■■■□ 3.38
LIMD2-208ENST00000579814 EN1Q05925 392 aaPredicted RBP36.14■■■■□ 3.38
LIMD2-208ENST00000579814 RGPD5Q99666 1765 aa36.13■■■■□ 3.37
LIMD2-208ENST00000579814 IL2RBP14784 551 aa36.13■■■■□ 3.37
LIMD2-208ENST00000579814 DISP2A7MBM2 1401 aa36.12■■■■□ 3.37
LIMD2-208ENST00000579814 APBA3O96018 575 aa36.12■■■■□ 3.37
LIMD2-208ENST00000579814 MYOM1P52179 1685 aa36.12■■■■□ 3.37
LIMD2-208ENST00000579814 PARP4Q9UKK3 1724 aaKnown RBP36.11■■■■□ 3.37
LIMD2-208ENST00000579814 RTL1A6NKG5 1358 aa36.11■■■■□ 3.37
LIMD2-208ENST00000579814 OVOS2A0A0G2JMS6 1433 aa36.1■■■■□ 3.37
LIMD2-208ENST00000579814 LTN1O94822 1766 aa36.1■■■■□ 3.37
LIMD2-208ENST00000579814 MARCH10Q8NA82 808 aaPredicted RBP36.1■■■■□ 3.37
LIMD2-208ENST00000579814 KIF24Q5T7B8 1368 aa36.03■■■■□ 3.36
LIMD2-208ENST00000579814 HSP90AB2PQ58FF8 381 aa36.03■■■■□ 3.36
LIMD2-208ENST00000579814 EZH2Q15910 746 aaKnown RBP36.02■■■■□ 3.36
LIMD2-208ENST00000579814 CAMKK2Q96RR4 588 aa36.02■■■■□ 3.36
LIMD2-208ENST00000579814 RGPD1P0DJD0 1748 aa36.02■■■■□ 3.36
LIMD2-208ENST00000579814 FLT4P35916 1363 aa36.02■■■■□ 3.36
LIMD2-208ENST00000579814 LRRC37A3O60309 1634 aa36.01■■■■□ 3.36
LIMD2-208ENST00000579814 KIF7Q2M1P5 1343 aa36.01■■■■□ 3.35
LIMD2-208ENST00000579814 PPM1GO15355 546 aaPredicted RBP36■■■■□ 3.35
LIMD2-208ENST00000579814 EMILIN1Q9Y6C2 1016 aa36■■■■□ 3.35
LIMD2-208ENST00000579814 INSRP06213 1382 aa36■■■■□ 3.35
LIMD2-208ENST00000579814 TNS2Q63HR2 1409 aa36■■■■□ 3.35
LIMD2-208ENST00000579814 SMG6Q86US8 1419 aaKnown RBP36■■■■□ 3.35
LIMD2-208ENST00000579814 BCL11BQ9C0K0 894 aaPredicted RBP35.99■■■■□ 3.35
LIMD2-208ENST00000579814 BCL9O00512 1426 aa35.99■■■■□ 3.35
LIMD2-208ENST00000579814 KIF20BQ96Q89 1820 aa35.97■■■■□ 3.35
LIMD2-208ENST00000579814 NBPF6Q5VWK0 638 aa35.97■■■■□ 3.35
LIMD2-208ENST00000579814 NBPF4Q96M43 638 aa35.97■■■■□ 3.35
LIMD2-208ENST00000579814 KNSTRNQ9Y448 316 aa35.97■■■■□ 3.35
LIMD2-208ENST00000579814 PARD3Q8TEW0 1356 aa35.97■■■■□ 3.35
LIMD2-208ENST00000579814 TNNT2P45379 298 aaPredicted RBP35.94■■■■□ 3.34
LIMD2-208ENST00000579814 POLKQ9UBT6 870 aa35.92■■■■□ 3.34
LIMD2-208ENST00000579814 NSD2O96028 1365 aa35.91■■■■□ 3.34
LIMD2-208ENST00000579814 WASHC2AQ641Q2 1341 aa35.91■■■■□ 3.34
LIMD2-208ENST00000579814 WNK3Q9BYP7 1800 aa35.9■■■■□ 3.34
LIMD2-208ENST00000579814 DDX54Q8TDD1 881 aaKnown RBP35.9■■■■□ 3.34
LIMD2-208ENST00000579814 PEAK1Q9H792 1746 aa35.9■■■■□ 3.34
LIMD2-208ENST00000579814 TNS1Q9HBL0 1735 aaKnown RBP35.89■■■■□ 3.34
LIMD2-208ENST00000579814 PLSCR1O15162 318 aa35.89■■■■□ 3.34
LIMD2-208ENST00000579814 MORC1Q86VD1 984 aa35.89■■■■□ 3.34
LIMD2-208ENST00000579814 USHBP1Q8N6Y0 703 aa35.89■■■■□ 3.34
LIMD2-208ENST00000579814 RAPGEF4Q8WZA2 1011 aa35.89■■■■□ 3.34
LIMD2-208ENST00000579814 PTF1AQ7RTS3 328 aa35.88■■■■□ 3.33
LIMD2-208ENST00000579814 ZCRB1Q8TBF4 217 aaKnown RBP35.87■■■■□ 3.33
LIMD2-208ENST00000579814 FAM208AQ9UK61 1670 aaKnown RBP35.86■■■■□ 3.33
LIMD2-208ENST00000579814 ACSBG1Q96GR2 724 aa35.85■■■■□ 3.33
LIMD2-208ENST00000579814 TATP17735 454 aaPredicted RBP35.84■■■■□ 3.33
LIMD2-208ENST00000579814 PSDA5PKW4 1024 aaPredicted RBP35.83■■■■□ 3.33
LIMD2-208ENST00000579814 KCNQ2O43526 872 aa35.83■■■■□ 3.33
LIMD2-208ENST00000579814 NBPF14Q5TI25 921 aa35.82■■■■□ 3.32
LIMD2-208ENST00000579814 R3HDM1Q15032 1099 aaKnown RBP35.8■■■■□ 3.32
LIMD2-208ENST00000579814 AMER1Q5JTC6 1135 aaPredicted RBP35.8■■■■□ 3.32
LIMD2-208ENST00000579814 MEGF6O75095 1541 aa35.78■■■■□ 3.32
LIMD2-208ENST00000579814 PER1O15534 1290 aaPredicted RBP35.76■■■■□ 3.32
LIMD2-208ENST00000579814 EYA1Q99502 592 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms