RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
CDK5RAP3-213ENST00000579605 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP3-213ENST00000579605 DCAF11Q8TEB1 546 aa19.45■□□□□ 0.7
CDK5RAP3-213ENST00000579605 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
CDK5RAP3-213ENST00000579605 CHD4Q14839 1912 aa19.43■□□□□ 0.7
CDK5RAP3-213ENST00000579605 RGPD3A6NKT7 1758 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-213ENST00000579605 RGPD4Q7Z3J3 1758 aa19.43■□□□□ 0.7
CDK5RAP3-213ENST00000579605 NLRP6P59044 892 aa19.42■□□□□ 0.7
CDK5RAP3-213ENST00000579605 CEP350Q5VT06 3117 aa19.41■□□□□ 0.7
CDK5RAP3-213ENST00000579605 EXOC5O00471 708 aa19.41■□□□□ 0.7
CDK5RAP3-213ENST00000579605 ACSBG1Q96GR2 724 aa19.41■□□□□ 0.7
CDK5RAP3-213ENST00000579605 AXIN2Q9Y2T1 843 aa19.41■□□□□ 0.7
CDK5RAP3-213ENST00000579605 LRRC37A3O60309 1634 aa19.4■□□□□ 0.7
CDK5RAP3-213ENST00000579605 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
CDK5RAP3-213ENST00000579605 CSB-PGBD3P0DP91 1061 aa19.4■□□□□ 0.7
CDK5RAP3-213ENST00000579605 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-213ENST00000579605 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
CDK5RAP3-213ENST00000579605 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
CDK5RAP3-213ENST00000579605 ITSN1Q15811 1721 aa19.39■□□□□ 0.69
CDK5RAP3-213ENST00000579605 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
CDK5RAP3-213ENST00000579605 ZNF827Q17R98 1081 aa19.37■□□□□ 0.69
CDK5RAP3-213ENST00000579605 BCL9O00512 1426 aa19.36■□□□□ 0.69
CDK5RAP3-213ENST00000579605 SOX12O15370 315 aa19.36■□□□□ 0.69
CDK5RAP3-213ENST00000579605 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-213ENST00000579605 POLD1P28340 1107 aa19.35■□□□□ 0.69
CDK5RAP3-213ENST00000579605 NLGN2Q8NFZ4 835 aa19.35■□□□□ 0.69
CDK5RAP3-213ENST00000579605 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
CDK5RAP3-213ENST00000579605 CABP2Q9NPB3 220 aa19.34■□□□□ 0.69
CDK5RAP3-213ENST00000579605 PPIP5K1Q6PFW1 1433 aa19.32■□□□□ 0.68
CDK5RAP3-213ENST00000579605 LRRC4BQ9NT99 713 aa19.31■□□□□ 0.68
CDK5RAP3-213ENST00000579605 GRIN3BO60391 1043 aa19.3■□□□□ 0.68
CDK5RAP3-213ENST00000579605 YBX3P16989 372 aaKnown RBP eCLIP19.3■□□□□ 0.68
CDK5RAP3-213ENST00000579605 ZNF526Q8TF50 670 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-213ENST00000579605 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
CDK5RAP3-213ENST00000579605 SHANK3Q9BYB0 1731 aa19.29■□□□□ 0.68
CDK5RAP3-213ENST00000579605 HSPA6P17066 643 aa19.29■□□□□ 0.68
CDK5RAP3-213ENST00000579605 SLC16A10Q8TF71 515 aa19.29■□□□□ 0.68
CDK5RAP3-213ENST00000579605 ARHGEF25Q86VW2 580 aa19.28■□□□□ 0.68
CDK5RAP3-213ENST00000579605 GPBP1L1Q9HC44 474 aaPredicted RBP19.28■□□□□ 0.68
CDK5RAP3-213ENST00000579605 TOPAZ1Q8N9V7 1692 aa19.27■□□□□ 0.68
CDK5RAP3-213ENST00000579605 ATP10DQ9P241 1426 aa19.27■□□□□ 0.68
CDK5RAP3-213ENST00000579605 ARHGEF28Q8N1W1 1705 aaKnown RBP19.27■□□□□ 0.68
CDK5RAP3-213ENST00000579605 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.67
CDK5RAP3-213ENST00000579605 USP6P35125 1406 aa19.26■□□□□ 0.67
CDK5RAP3-213ENST00000579605 AKT1S1Q96B36 256 aa19.26■□□□□ 0.67
CDK5RAP3-213ENST00000579605 TFCP2L1Q9NZI6 479 aa19.26■□□□□ 0.67
CDK5RAP3-213ENST00000579605 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
CDK5RAP3-213ENST00000579605 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
CDK5RAP3-213ENST00000579605 KCNQ4P56696 695 aa19.25■□□□□ 0.67
CDK5RAP3-213ENST00000579605 STAC3Q96MF2 364 aa19.25■□□□□ 0.67
CDK5RAP3-213ENST00000579605 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
CDK5RAP3-213ENST00000579605 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
CDK5RAP3-213ENST00000579605 SLIT3O75094 1523 aa19.24■□□□□ 0.67
CDK5RAP3-213ENST00000579605 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
CDK5RAP3-213ENST00000579605 MSH5O43196 834 aa19.23■□□□□ 0.67
CDK5RAP3-213ENST00000579605 KCNH5Q8NCM2 988 aa19.23■□□□□ 0.67
CDK5RAP3-213ENST00000579605 NLRP2Q9NX02 1062 aa19.22■□□□□ 0.67
CDK5RAP3-213ENST00000579605 TNS2Q63HR2 1409 aa19.22■□□□□ 0.67
CDK5RAP3-213ENST00000579605 COL18A1P39060 1754 aa19.21■□□□□ 0.67
CDK5RAP3-213ENST00000579605 PAPPAQ13219 1627 aa19.21■□□□□ 0.67
CDK5RAP3-213ENST00000579605 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
CDK5RAP3-213ENST00000579605 WNK3Q9BYP7 1800 aa19.19■□□□□ 0.66
CDK5RAP3-213ENST00000579605 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
CDK5RAP3-213ENST00000579605 NHSQ6T4R5 1651 aa19.18■□□□□ 0.66
CDK5RAP3-213ENST00000579605 IL2RBP14784 551 aa19.18■□□□□ 0.66
CDK5RAP3-213ENST00000579605 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
CDK5RAP3-213ENST00000579605 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
CDK5RAP3-213ENST00000579605 MSL1Q68DK7 614 aa19.17■□□□□ 0.66
CDK5RAP3-213ENST00000579605 DDX54Q8TDD1 881 aaKnown RBP19.17■□□□□ 0.66
CDK5RAP3-213ENST00000579605 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-213ENST00000579605 WWC3Q9ULE0 1092 aa19.14■□□□□ 0.65
CDK5RAP3-213ENST00000579605 CAPN15O75808 1086 aa19.13■□□□□ 0.65
CDK5RAP3-213ENST00000579605 PIK3C2AO00443 1686 aa19.13■□□□□ 0.65
CDK5RAP3-213ENST00000579605 RGPD5Q99666 1765 aa19.13■□□□□ 0.65
CDK5RAP3-213ENST00000579605 BTAF1O14981 1849 aa19.12■□□□□ 0.65
CDK5RAP3-213ENST00000579605 COL23A1Q86Y22 540 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-213ENST00000579605 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
CDK5RAP3-213ENST00000579605 PRIM1P49642 420 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-213ENST00000579605 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
CDK5RAP3-213ENST00000579605 ABCC6O95255 1503 aa19.1■□□□□ 0.65
CDK5RAP3-213ENST00000579605 ERBB3P21860 1342 aa19.1■□□□□ 0.65
CDK5RAP3-213ENST00000579605 ANKRD24Q8TF21 1146 aa19.1■□□□□ 0.65
CDK5RAP3-213ENST00000579605 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
CDK5RAP3-213ENST00000579605 KIF3CO14782 793 aa19.08■□□□□ 0.64
CDK5RAP3-213ENST00000579605 APLP1P51693 650 aa19.08■□□□□ 0.64
CDK5RAP3-213ENST00000579605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.64
CDK5RAP3-213ENST00000579605 CCNL1Q9UK58 526 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-213ENST00000579605 ADCY9O60503 1353 aa19.07■□□□□ 0.64
CDK5RAP3-213ENST00000579605 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
CDK5RAP3-213ENST00000579605 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
CDK5RAP3-213ENST00000579605 CD2APQ9Y5K6 639 aa19.07■□□□□ 0.64
CDK5RAP3-213ENST00000579605 EVC2Q86UK5 1308 aa19.06■□□□□ 0.64
CDK5RAP3-213ENST00000579605 DNAJC5GQ8N7S2 189 aa19.05■□□□□ 0.64
CDK5RAP3-213ENST00000579605 NFAT5O94916 1531 aa19.05■□□□□ 0.64
CDK5RAP3-213ENST00000579605 COL13A1Q5TAT6 717 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-213ENST00000579605 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-213ENST00000579605 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
CDK5RAP3-213ENST00000579605 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-213ENST00000579605 QRICH2Q9H0J4 1663 aa19.01■□□□□ 0.63
CDK5RAP3-213ENST00000579605 QSER1Q2KHR3 1735 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms