RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 FAM98CQ17RN3 349 aaKnown RBP33.18■■■□□ 2.9
LIMD2-207ENST00000579329 ABCC6O95255 1503 aa33.18■■■□□ 2.9
LIMD2-207ENST00000579329 COG3Q96JB2 828 aa33.17■■■□□ 2.9
LIMD2-207ENST00000579329 LARP1Q6PKG0 1096 aaKnown RBP33.16■■■□□ 2.9
LIMD2-207ENST00000579329 DEFB132Q7Z7B7 95 aa33.16■■■□□ 2.9
LIMD2-207ENST00000579329 A0A0G2JS52 829 aa33.15■■■□□ 2.9
LIMD2-207ENST00000579329 MYT1Q01538 1121 aa33.15■■■□□ 2.9
LIMD2-207ENST00000579329 NSD3Q9BZ95 1437 aa33.13■■■□□ 2.89
LIMD2-207ENST00000579329 AXIN2Q9Y2T1 843 aa33.12■■■□□ 2.89
LIMD2-207ENST00000579329 KIF20BQ96Q89 1820 aa33.12■■■□□ 2.89
LIMD2-207ENST00000579329 THSD7AQ9UPZ6 1657 aa33.11■■■□□ 2.89
LIMD2-207ENST00000579329 FYB1O15117 783 aa33.11■■■□□ 2.89
LIMD2-207ENST00000579329 CARD14Q9BXL6 1004 aa33.11■■■□□ 2.89
LIMD2-207ENST00000579329 CRB1P82279 1406 aa33.11■■■□□ 2.89
LIMD2-207ENST00000579329 USP35Q9P2H5 1018 aa33.1■■■□□ 2.89
LIMD2-207ENST00000579329 LTN1O94822 1766 aa33.1■■■□□ 2.89
LIMD2-207ENST00000579329 GGNBP2Q9H3C7 697 aa33.09■■■□□ 2.89
LIMD2-207ENST00000579329 C11orf95C9JLR9 678 aaPredicted RBP33.08■■■□□ 2.89
LIMD2-207ENST00000579329 SF3B2Q13435 895 aaKnown RBP33.08■■■□□ 2.89
LIMD2-207ENST00000579329 TCP11L2Q8N4U5 519 aa33.08■■■□□ 2.89
LIMD2-207ENST00000579329 WDR17Q8IZU2 1322 aa33.07■■■□□ 2.88
LIMD2-207ENST00000579329 RGPD5Q99666 1765 aa33.07■■■□□ 2.88
LIMD2-207ENST00000579329 BARGINQ6ZT62 677 aa33.07■■■□□ 2.88
LIMD2-207ENST00000579329 THRAP3Q9Y2W1 955 aaKnown RBP33.07■■■□□ 2.88
LIMD2-207ENST00000579329 KRT27Q7Z3Y8 459 aa33.06■■■□□ 2.88
LIMD2-207ENST00000579329 TOM1L2Q6ZVM7 507 aa33.05■■■□□ 2.88
LIMD2-207ENST00000579329 CSB-PGBD3P0DP91 1061 aa33.03■■■□□ 2.88
LIMD2-207ENST00000579329 LRP5O75197 1615 aa33.02■■■□□ 2.88
LIMD2-207ENST00000579329 CGNL1Q0VF96 1302 aa33.02■■■□□ 2.88
LIMD2-207ENST00000579329 KIF7Q2M1P5 1343 aa33.01■■■□□ 2.87
LIMD2-207ENST00000579329 PANK3Q9H999 370 aa32.99■■■□□ 2.87
LIMD2-207ENST00000579329 MAP3K19Q56UN5 1328 aa32.99■■■□□ 2.87
LIMD2-207ENST00000579329 ERBB3P21860 1342 aa32.98■■■□□ 2.87
LIMD2-207ENST00000579329 IP6K1Q92551 441 aa32.97■■■□□ 2.87
LIMD2-207ENST00000579329 CARD10Q9BWT7 1032 aa32.96■■■□□ 2.87
LIMD2-207ENST00000579329 FBLN1P23142 703 aa32.95■■■□□ 2.87
LIMD2-207ENST00000579329 AMPHP49418 695 aa32.94■■■□□ 2.86
LIMD2-207ENST00000579329 ANKRD24Q8TF21 1146 aa32.94■■■□□ 2.86
LIMD2-207ENST00000579329 RTL1A6NKG5 1358 aa32.94■■■□□ 2.86
LIMD2-207ENST00000579329 CCDC7Q96M83 1385 aa32.94■■■□□ 2.86
LIMD2-207ENST00000579329 RGPD1P0DJD0 1748 aa32.93■■■□□ 2.86
LIMD2-207ENST00000579329 PARP4Q9UKK3 1724 aaKnown RBP32.93■■■□□ 2.86
LIMD2-207ENST00000579329 RRS1Q15050 365 aaKnown RBP32.92■■■□□ 2.86
LIMD2-207ENST00000579329 WNK3Q9BYP7 1800 aa32.92■■■□□ 2.86
LIMD2-207ENST00000579329 HOXC9P31274 260 aa32.91■■■□□ 2.86
LIMD2-207ENST00000579329 PSDA5PKW4 1024 aaPredicted RBP32.9■■■□□ 2.86
LIMD2-207ENST00000579329 BAG6P46379 1132 aa32.9■■■□□ 2.86
LIMD2-207ENST00000579329 CDCA7Q9BWT1 371 aaPredicted RBP32.9■■■□□ 2.86
LIMD2-207ENST00000579329 ANKRD26Q9UPS8 1709 aa32.89■■■□□ 2.86
LIMD2-207ENST00000579329 PDE3BQ13370 1112 aa32.89■■■□□ 2.86
LIMD2-207ENST00000579329 NLRP2Q9NX02 1062 aa32.89■■■□□ 2.86
LIMD2-207ENST00000579329 FAM208AQ9UK61 1670 aaKnown RBP32.88■■■□□ 2.85
LIMD2-207ENST00000579329 NSD2O96028 1365 aa32.87■■■□□ 2.85
LIMD2-207ENST00000579329 KIF24Q5T7B8 1368 aa32.86■■■□□ 2.85
LIMD2-207ENST00000579329 LRRC37A3O60309 1634 aa32.86■■■□□ 2.85
LIMD2-207ENST00000579329 DISP2A7MBM2 1401 aa32.85■■■□□ 2.85
LIMD2-207ENST00000579329 FAM182BQ5T319 152 aa32.85■■■□□ 2.85
LIMD2-207ENST00000579329 LTV1Q96GA3 475 aaPredicted RBP32.85■■■□□ 2.85
LIMD2-207ENST00000579329 KNSTRNQ9Y448 316 aa32.84■■■□□ 2.85
LIMD2-207ENST00000579329 TNS1Q9HBL0 1735 aaKnown RBP32.83■■■□□ 2.85
LIMD2-207ENST00000579329 DDB1Q16531 1140 aa32.83■■■□□ 2.85
LIMD2-207ENST00000579329 FLT4P35916 1363 aa32.83■■■□□ 2.85
LIMD2-207ENST00000579329 WASHC2AQ641Q2 1341 aa32.82■■■□□ 2.84
LIMD2-207ENST00000579329 PEAK1Q9H792 1746 aa32.82■■■□□ 2.84
LIMD2-207ENST00000579329 FAM196AQ6ZSG2 479 aa32.81■■■□□ 2.84
LIMD2-207ENST00000579329 EN1Q05925 392 aaPredicted RBP32.8■■■□□ 2.84
LIMD2-207ENST00000579329 SMG6Q86US8 1419 aaKnown RBP32.79■■■□□ 2.84
LIMD2-207ENST00000579329 EMILIN1Q9Y6C2 1016 aa32.79■■■□□ 2.84
LIMD2-207ENST00000579329 INSRP06213 1382 aa32.79■■■□□ 2.84
LIMD2-207ENST00000579329 IL2RBP14784 551 aa32.76■■■□□ 2.83
LIMD2-207ENST00000579329 HSP90AB2PQ58FF8 381 aa32.75■■■□□ 2.83
LIMD2-207ENST00000579329 TNS2Q63HR2 1409 aa32.75■■■□□ 2.83
LIMD2-207ENST00000579329 OVOS2A0A0G2JMS6 1433 aa32.74■■■□□ 2.83
LIMD2-207ENST00000579329 MAP2P11137 1827 aaKnown RBP32.74■■■□□ 2.83
LIMD2-207ENST00000579329 EXOC5O00471 708 aa32.73■■■□□ 2.83
LIMD2-207ENST00000579329 TNNT2P45379 298 aaPredicted RBP32.73■■■□□ 2.83
LIMD2-207ENST00000579329 PPM1GO15355 546 aaPredicted RBP32.72■■■□□ 2.83
LIMD2-207ENST00000579329 MORC1Q86VD1 984 aa32.72■■■□□ 2.83
LIMD2-207ENST00000579329 POLKQ9UBT6 870 aa32.72■■■□□ 2.83
LIMD2-207ENST00000579329 AMER1Q5JTC6 1135 aaPredicted RBP32.71■■■□□ 2.83
LIMD2-207ENST00000579329 RGPD2P0DJD1 1756 aa32.7■■■□□ 2.83
LIMD2-207ENST00000579329 R3HDM1Q15032 1099 aaKnown RBP32.7■■■□□ 2.83
LIMD2-207ENST00000579329 PER1O15534 1290 aaPredicted RBP32.69■■■□□ 2.82
LIMD2-207ENST00000579329 TRIM37O94972 964 aa32.68■■■□□ 2.82
LIMD2-207ENST00000579329 NBPF6Q5VWK0 638 aa32.67■■■□□ 2.82
LIMD2-207ENST00000579329 MARCH10Q8NA82 808 aaPredicted RBP32.67■■■□□ 2.82
LIMD2-207ENST00000579329 NBPF4Q96M43 638 aa32.67■■■□□ 2.82
LIMD2-207ENST00000579329 EZH2Q15910 746 aaKnown RBP32.66■■■□□ 2.82
LIMD2-207ENST00000579329 BCL9O00512 1426 aa32.64■■■□□ 2.82
LIMD2-207ENST00000579329 USHBP1Q8N6Y0 703 aa32.62■■■□□ 2.81
LIMD2-207ENST00000579329 NPC1L1Q9UHC9 1359 aa32.6■■■□□ 2.81
LIMD2-207ENST00000579329 MEGF6O75095 1541 aa32.6■■■□□ 2.81
LIMD2-207ENST00000579329 CAMKK2Q96RR4 588 aa32.59■■■□□ 2.81
LIMD2-207ENST00000579329 CC2D1BQ5T0F9 858 aaKnown RBP32.58■■■□□ 2.81
LIMD2-207ENST00000579329 RAPGEF4Q8WZA2 1011 aa32.58■■■□□ 2.81
LIMD2-207ENST00000579329 RREB1Q92766 1687 aa32.58■■■□□ 2.81
LIMD2-207ENST00000579329 SBF2Q86WG5 1849 aa32.58■■■□□ 2.81
LIMD2-207ENST00000579329 APBA3O96018 575 aa32.57■■■□□ 2.8
LIMD2-207ENST00000579329 NCAPD2Q15021 1401 aa32.56■■■□□ 2.8
LIMD2-207ENST00000579329 NUP188Q5SRE5 1749 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms