RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 BRD4O60885 1362 aaPredicted RBP13.28□□□□□ -0.28
PTPRM-210ENST00000578916 TOPAZ1Q8N9V7 1692 aa13.28□□□□□ -0.28
PTPRM-210ENST00000578916 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
PTPRM-210ENST00000578916 CABP2Q9NPB3 220 aa13.27□□□□□ -0.29
PTPRM-210ENST00000578916 PEAK1Q9H792 1746 aa13.27□□□□□ -0.29
PTPRM-210ENST00000578916 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
PTPRM-210ENST00000578916 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
PTPRM-210ENST00000578916 CASZ1Q86V15 1759 aa13.27□□□□□ -0.29
PTPRM-210ENST00000578916 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
PTPRM-210ENST00000578916 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
PTPRM-210ENST00000578916 LRRC37A3O60309 1634 aa13.25□□□□□ -0.29
PTPRM-210ENST00000578916 BCL9O00512 1426 aa13.25□□□□□ -0.29
PTPRM-210ENST00000578916 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
PTPRM-210ENST00000578916 CABP1Q9NZU7 370 aa13.25□□□□□ -0.29
PTPRM-210ENST00000578916 EXOC5O00471 708 aa13.24□□□□□ -0.29
PTPRM-210ENST00000578916 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
PTPRM-210ENST00000578916 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
PTPRM-210ENST00000578916 MYOM1P52179 1685 aa13.24□□□□□ -0.29
PTPRM-210ENST00000578916 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
PTPRM-210ENST00000578916 NBPF1Q3BBV0 1214 aa13.23□□□□□ -0.29
PTPRM-210ENST00000578916 ARXQ96QS3 562 aa13.23□□□□□ -0.29
PTPRM-210ENST00000578916 USP6P35125 1406 aa13.22□□□□□ -0.29
PTPRM-210ENST00000578916 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
PTPRM-210ENST00000578916 SLIT3O75094 1523 aa13.22□□□□□ -0.29
PTPRM-210ENST00000578916 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
PTPRM-210ENST00000578916 SOX12O15370 315 aa13.21□□□□□ -0.29
PTPRM-210ENST00000578916 ARHGEF25Q86VW2 580 aa13.21□□□□□ -0.29
PTPRM-210ENST00000578916 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
PTPRM-210ENST00000578916 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
PTPRM-210ENST00000578916 UTRNP46939 3433 aa13.21□□□□□ -0.3
PTPRM-210ENST00000578916 CPSF1Q10570 1443 aaKnown RBP13.2□□□□□ -0.3
PTPRM-210ENST00000578916 GPR162Q16538 588 aa13.19□□□□□ -0.3
PTPRM-210ENST00000578916 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
PTPRM-210ENST00000578916 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
PTPRM-210ENST00000578916 CCDC7Q96M83 1385 aa13.18□□□□□ -0.3
PTPRM-210ENST00000578916 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
PTPRM-210ENST00000578916 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
PTPRM-210ENST00000578916 COL18A1P39060 1754 aa13.17□□□□□ -0.3
PTPRM-210ENST00000578916 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
PTPRM-210ENST00000578916 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
PTPRM-210ENST00000578916 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
PTPRM-210ENST00000578916 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
PTPRM-210ENST00000578916 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
PTPRM-210ENST00000578916 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
PTPRM-210ENST00000578916 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
PTPRM-210ENST00000578916 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
PTPRM-210ENST00000578916 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
PTPRM-210ENST00000578916 PIK3C2AO00443 1686 aa13.15□□□□□ -0.31
PTPRM-210ENST00000578916 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
PTPRM-210ENST00000578916 POLD1P28340 1107 aa13.14□□□□□ -0.31
PTPRM-210ENST00000578916 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
PTPRM-210ENST00000578916 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
PTPRM-210ENST00000578916 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
PTPRM-210ENST00000578916 CHD4Q14839 1912 aa13.12□□□□□ -0.31
PTPRM-210ENST00000578916 IL2RBP14784 551 aa13.12□□□□□ -0.31
PTPRM-210ENST00000578916 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
PTPRM-210ENST00000578916 TRPM1Q7Z4N2 1603 aa13.11□□□□□ -0.31
PTPRM-210ENST00000578916 LRRC4BQ9NT99 713 aa13.11□□□□□ -0.31
PTPRM-210ENST00000578916 NHSQ6T4R5 1651 aa13.11□□□□□ -0.31
PTPRM-210ENST00000578916 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
PTPRM-210ENST00000578916 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
PTPRM-210ENST00000578916 ERBB3P21860 1342 aa13.1□□□□□ -0.31
PTPRM-210ENST00000578916 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
PTPRM-210ENST00000578916 NFAT5O94916 1531 aa13.09□□□□□ -0.31
PTPRM-210ENST00000578916 ABCC6O95255 1503 aa13.09□□□□□ -0.31
PTPRM-210ENST00000578916 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
PTPRM-210ENST00000578916 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
PTPRM-210ENST00000578916 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
PTPRM-210ENST00000578916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPRM-210ENST00000578916 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
PTPRM-210ENST00000578916 TFCP2L1Q9NZI6 479 aa13.08□□□□□ -0.32
PTPRM-210ENST00000578916 GRIN3BO60391 1043 aa13.07□□□□□ -0.32
PTPRM-210ENST00000578916 NLGN2Q8NFZ4 835 aa13.07□□□□□ -0.32
PTPRM-210ENST00000578916 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
PTPRM-210ENST00000578916 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
PTPRM-210ENST00000578916 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
PTPRM-210ENST00000578916 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
PTPRM-210ENST00000578916 BTAF1O14981 1849 aa13.04□□□□□ -0.32
PTPRM-210ENST00000578916 MSH5O43196 834 aa13.04□□□□□ -0.32
PTPRM-210ENST00000578916 KCNQ4P56696 695 aa13.04□□□□□ -0.32
PTPRM-210ENST00000578916 NME9Q86XW9 330 aa13.04□□□□□ -0.32
PTPRM-210ENST00000578916 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
PTPRM-210ENST00000578916 CEP350Q5VT06 3117 aa13.03□□□□□ -0.32
PTPRM-210ENST00000578916 GOLGB1Q14789 3259 aaKnown RBP13.03□□□□□ -0.32
PTPRM-210ENST00000578916 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPRM-210ENST00000578916 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
PTPRM-210ENST00000578916 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
PTPRM-210ENST00000578916 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
PTPRM-210ENST00000578916 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
PTPRM-210ENST00000578916 TMC1Q8TDI8 760 aa13.01□□□□□ -0.33
PTPRM-210ENST00000578916 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
PTPRM-210ENST00000578916 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
PTPRM-210ENST00000578916 ATP10DQ9P241 1426 aa13□□□□□ -0.33
PTPRM-210ENST00000578916 ANKRD36BQ8N2N9 1353 aa13□□□□□ -0.33
PTPRM-210ENST00000578916 IP6K1Q92551 441 aa13□□□□□ -0.33
PTPRM-210ENST00000578916 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
PTPRM-210ENST00000578916 CCNL1Q9UK58 526 aaPredicted RBP13□□□□□ -0.33
PTPRM-210ENST00000578916 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
PTPRM-210ENST00000578916 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
PTPRM-210ENST00000578916 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms