RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
CDK5RAP3-210ENST00000578733 TRPC5Q9UL62 973 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-210ENST00000578733 COL18A1P39060 1754 aa15.22■□□□□ 0.03
CDK5RAP3-210ENST00000578733 AMPHP49418 695 aa15.22■□□□□ 0.03
CDK5RAP3-210ENST00000578733 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-210ENST00000578733 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-210ENST00000578733 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
CDK5RAP3-210ENST00000578733 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
CDK5RAP3-210ENST00000578733 MYBBP1AQ9BQG0 1328 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-210ENST00000578733 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-210ENST00000578733 ADAMTS2O95450 1211 aa15.21■□□□□ 0.03
CDK5RAP3-210ENST00000578733 USP21Q9UK80 565 aa15.21■□□□□ 0.03
CDK5RAP3-210ENST00000578733 FLT4P35916 1363 aa15.21■□□□□ 0.02
CDK5RAP3-210ENST00000578733 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
CDK5RAP3-210ENST00000578733 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-210ENST00000578733 LMO7Q8WWI1 1683 aa15.2■□□□□ 0.02
CDK5RAP3-210ENST00000578733 EP400Q96L91 3159 aa15.2■□□□□ 0.02
CDK5RAP3-210ENST00000578733 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-210ENST00000578733 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-210ENST00000578733 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
CDK5RAP3-210ENST00000578733 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-210ENST00000578733 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
CDK5RAP3-210ENST00000578733 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
CDK5RAP3-210ENST00000578733 ATRNO75882 1429 aa15.18■□□□□ 0.02
CDK5RAP3-210ENST00000578733 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
CDK5RAP3-210ENST00000578733 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-210ENST00000578733 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
CDK5RAP3-210ENST00000578733 POLKQ9UBT6 870 aa15.17■□□□□ 0.02
CDK5RAP3-210ENST00000578733 IP6K1Q92551 441 aa15.16■□□□□ 0.02
CDK5RAP3-210ENST00000578733 EMILIN1Q9Y6C2 1016 aa15.16■□□□□ 0.02
CDK5RAP3-210ENST00000578733 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
CDK5RAP3-210ENST00000578733 HOXC9P31274 260 aa15.15■□□□□ 0.02
CDK5RAP3-210ENST00000578733 MTHFSP49914 203 aa15.15■□□□□ 0.02
CDK5RAP3-210ENST00000578733 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
CDK5RAP3-210ENST00000578733 INSRP06213 1382 aa15.14■□□□□ 0.01
CDK5RAP3-210ENST00000578733 SLIT2O94813 1529 aa15.14■□□□□ 0.01
CDK5RAP3-210ENST00000578733 FAM83GA6ND36 823 aa15.14■□□□□ 0.01
CDK5RAP3-210ENST00000578733 FBLN1P23142 703 aa15.14■□□□□ 0.01
CDK5RAP3-210ENST00000578733 EVA1CP58658 441 aa15.14■□□□□ 0.01
CDK5RAP3-210ENST00000578733 CAMTA1Q9Y6Y1 1673 aa15.13■□□□□ 0.01
CDK5RAP3-210ENST00000578733 BTG4Q9NY30 223 aa15.13■□□□□ 0.01
CDK5RAP3-210ENST00000578733 COL5A2P05997 1499 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-210ENST00000578733 CSB-PGBD3P0DP91 1061 aa15.12■□□□□ 0.01
CDK5RAP3-210ENST00000578733 WNK3Q9BYP7 1800 aa15.12■□□□□ 0.01
CDK5RAP3-210ENST00000578733 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
CDK5RAP3-210ENST00000578733 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-210ENST00000578733 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
CDK5RAP3-210ENST00000578733 UNC5CLQ8IV45 518 aa15.1■□□□□ 0.01
CDK5RAP3-210ENST00000578733 ANKRD24Q8TF21 1146 aa15.1■□□□□ 0.01
CDK5RAP3-210ENST00000578733 ERBB3P21860 1342 aa15.1■□□□□ 0.01
CDK5RAP3-210ENST00000578733 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
CDK5RAP3-210ENST00000578733 BCL9LQ86UU0 1499 aa15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 GJD4Q96KN9 370 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 STRN4Q9NRL3 753 aa15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 PARP4Q9UKK3 1724 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 CRB1P82279 1406 aa15.09■□□□□ 0.01
CDK5RAP3-210ENST00000578733 COL3A1P02461 1466 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-210ENST00000578733 TOM1L2Q6ZVM7 507 aa15.08■□□□□ 0
CDK5RAP3-210ENST00000578733 AXIN2Q9Y2T1 843 aa15.08■□□□□ 0
CDK5RAP3-210ENST00000578733 CCER2I3L3R5 266 aa15.07■□□□□ 0
CDK5RAP3-210ENST00000578733 MRS2Q9HD23 443 aa15.07■□□□□ 0
CDK5RAP3-210ENST00000578733 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-210ENST00000578733 EIF4A2Q14240 407 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-210ENST00000578733 NLRP2Q9NX02 1062 aa15.06■□□□□ 0
CDK5RAP3-210ENST00000578733 LRP5O75197 1615 aa15.06■□□□□ 0
CDK5RAP3-210ENST00000578733 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-210ENST00000578733 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ -0
CDK5RAP3-210ENST00000578733 SF3B2Q13435 895 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-210ENST00000578733 VPS72Q15906 364 aa15.04■□□□□ -0
CDK5RAP3-210ENST00000578733 CARD10Q9BWT7 1032 aa15.04■□□□□ -0
CDK5RAP3-210ENST00000578733 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-210ENST00000578733 IL13P35225 146 aa15.03■□□□□ -0
CDK5RAP3-210ENST00000578733 LARP1Q6PKG0 1096 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-210ENST00000578733 THRAP3Q9Y2W1 955 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-210ENST00000578733 NEFMP07197 916 aa15.02■□□□□ -0
CDK5RAP3-210ENST00000578733 MIER1Q8N108 512 aa15.02■□□□□ -0
CDK5RAP3-210ENST00000578733 SPATA31A5Q5VU36 1347 aa15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 SPATA31A7Q8IWB4 1347 aa15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 IGSF1Q8N6C5 1336 aa15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 TCP11L2Q8N4U5 519 aa15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 EYA1Q99502 592 aa15.01□□□□□ -0.01
CDK5RAP3-210ENST00000578733 PLEKHG2Q9H7P9 1386 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 SPATA31A1Q5TZJ5 1347 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 GLI3P10071 1580 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 NBPF4Q96M43 638 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 CDCA7Q9BWT1 371 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 USP35Q9P2H5 1018 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 VIRMAQ69YN4 1812 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 NCAPD2Q15021 1401 aa15□□□□□ -0.01
CDK5RAP3-210ENST00000578733 RAPGEF4Q8WZA2 1011 aa14.99□□□□□ -0.01
CDK5RAP3-210ENST00000578733 PKD1L3Q7Z443 1732 aa14.99□□□□□ -0.01
CDK5RAP3-210ENST00000578733 KDRP35968 1356 aa14.98□□□□□ -0.01
CDK5RAP3-210ENST00000578733 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-210ENST00000578733 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
CDK5RAP3-210ENST00000578733 BRWD3Q6RI45 1802 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms