RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 ZBTB3Q9H5J0 574 aa6.32□□□□□ -1.4
PTPRM-209ENST00000578698 FIGNL2A6NMB9 653 aa6.31□□□□□ -1.4
PTPRM-209ENST00000578698 HRCP23327 699 aa6.31□□□□□ -1.4
PTPRM-209ENST00000578698 IRS1P35568 1242 aa6.31□□□□□ -1.4
PTPRM-209ENST00000578698 CSPP1Q1MSJ5 1256 aa6.31□□□□□ -1.4
PTPRM-209ENST00000578698 TBC1D2Q9BYX2 928 aa6.31□□□□□ -1.4
PTPRM-209ENST00000578698 PCDHB15Q9Y5E8 787 aa6.31□□□□□ -1.4
PTPRM-209ENST00000578698 MAGEB6P1A0A0J9YX57 407 aa6.3□□□□□ -1.4
PTPRM-209ENST00000578698 DIXDC1Q155Q3 683 aa6.3□□□□□ -1.4
PTPRM-209ENST00000578698 ZNF385CQ66K41 422 aaPredicted RBP6.3□□□□□ -1.4
PTPRM-209ENST00000578698 ZMYND15Q9H091 742 aa6.3□□□□□ -1.4
PTPRM-209ENST00000578698 EMILIN1Q9Y6C2 1016 aa6.3□□□□□ -1.4
PTPRM-209ENST00000578698 CDC14CA4D256 554 aa6.29□□□□□ -1.4
PTPRM-209ENST00000578698 MARSP56192 900 aaKnown RBP6.29□□□□□ -1.4
PTPRM-209ENST00000578698 CCDC116Q8IYX3 515 aa6.29□□□□□ -1.4
PTPRM-209ENST00000578698 CCDC155Q8N6L0 562 aa6.29□□□□□ -1.4
PTPRM-209ENST00000578698 RSPH6AQ9H0K4 717 aa6.29□□□□□ -1.4
PTPRM-209ENST00000578698 PER1O15534 1290 aaPredicted RBP6.28□□□□□ -1.4
PTPRM-209ENST00000578698 GJA5P36382 358 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 RANGAP1P46060 587 aaPredicted RBP6.28□□□□□ -1.4
PTPRM-209ENST00000578698 RNFT1Q5M7Z0 435 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 CABLES1Q8TDN4 633 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 ARID3AQ99856 593 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 CARD14Q9BXL6 1004 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 GOPCQ9HD26 462 aa6.28□□□□□ -1.4
PTPRM-209ENST00000578698 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
PTPRM-209ENST00000578698 FLIIQ13045 1269 aa6.27□□□□□ -1.41
PTPRM-209ENST00000578698 NBPF14Q5TI25 921 aa6.27□□□□□ -1.41
PTPRM-209ENST00000578698 WHAMMQ8TF30 809 aa6.27□□□□□ -1.41
PTPRM-209ENST00000578698 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
PTPRM-209ENST00000578698 MAP4K5Q9Y4K4 846 aa6.27□□□□□ -1.41
PTPRM-209ENST00000578698 NUTM2BA6NNL0 878 aaPredicted RBP6.26□□□□□ -1.41
PTPRM-209ENST00000578698 NUTM2EB1AL46 878 aaPredicted RBP6.26□□□□□ -1.41
PTPRM-209ENST00000578698 CBLBQ13191 982 aa6.26□□□□□ -1.41
PTPRM-209ENST00000578698 NUTM2DQ5VT03 806 aaPredicted RBP6.26□□□□□ -1.41
PTPRM-209ENST00000578698 NUTM2AQ8IVF1 878 aaPredicted RBP6.26□□□□□ -1.41
PTPRM-209ENST00000578698 VWA5B2Q8N398 1253 aa6.26□□□□□ -1.41
PTPRM-209ENST00000578698 NANOS1Q8WY41 292 aaKnown RBP6.26□□□□□ -1.41
PTPRM-209ENST00000578698 C1QTNF2Q9BXJ5 285 aa6.26□□□□□ -1.41
PTPRM-209ENST00000578698 IGHA1P01876 353 aa6.25□□□□□ -1.41
PTPRM-209ENST00000578698 PRPF38BQ5VTL8 546 aaKnown RBP6.25□□□□□ -1.41
PTPRM-209ENST00000578698 KANK3Q6NY19 840 aa6.25□□□□□ -1.41
PTPRM-209ENST00000578698 SV2AQ7L0J3 742 aa6.25□□□□□ -1.41
PTPRM-209ENST00000578698 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
PTPRM-209ENST00000578698 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
PTPRM-209ENST00000578698 PGPEP1Q9NXJ5 209 aa6.25□□□□□ -1.41
PTPRM-209ENST00000578698 ITGA6P23229 1130 aa6.24□□□□□ -1.41
PTPRM-209ENST00000578698 PPP1R26Q5T8A7 1209 aaPredicted RBP6.24□□□□□ -1.41
PTPRM-209ENST00000578698 SH3BP5LQ7L8J4 393 aa6.24□□□□□ -1.41
PTPRM-209ENST00000578698 TRMT44Q8IYL2 757 aaKnown RBP6.24□□□□□ -1.41
PTPRM-209ENST00000578698 SCARF2Q96GP6 870 aaPredicted RBP6.24□□□□□ -1.41
PTPRM-209ENST00000578698 C1orf115Q9H7X2 142 aa6.24□□□□□ -1.41
PTPRM-209ENST00000578698 SLC35F4A4IF30 521 aa6.23□□□□□ -1.41
PTPRM-209ENST00000578698 SPINT1O43278 529 aa6.23□□□□□ -1.41
PTPRM-209ENST00000578698 SLURP2P0DP57 97 aa6.23□□□□□ -1.41
PTPRM-209ENST00000578698 FOXK2Q01167 660 aa6.23□□□□□ -1.41
PTPRM-209ENST00000578698 MAP3K10Q02779 954 aa6.23□□□□□ -1.41
PTPRM-209ENST00000578698 SH3D19Q5HYK7 790 aa6.23□□□□□ -1.41
PTPRM-209ENST00000578698 ATP1B4Q9UN42 357 aaPredicted RBP6.23□□□□□ -1.41
PTPRM-209ENST00000578698 ARHGEF15O94989 841 aa6.22□□□□□ -1.41
PTPRM-209ENST00000578698 RELBQ01201 579 aa6.22□□□□□ -1.41
PTPRM-209ENST00000578698 HELBQ8NG08 1087 aaPredicted RBP6.22□□□□□ -1.41
PTPRM-209ENST00000578698 AGBL1Q96MI9 1066 aa6.22□□□□□ -1.41
PTPRM-209ENST00000578698 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
PTPRM-209ENST00000578698 ADAMTS2O95450 1211 aa6.21□□□□□ -1.42
PTPRM-209ENST00000578698 CTSOP43234 321 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-209ENST00000578698 QPCTQ16769 361 aa6.21□□□□□ -1.42
PTPRM-209ENST00000578698 Q6ZVU0 165 aa6.21□□□□□ -1.42
PTPRM-209ENST00000578698 NPM2Q86SE8 214 aaKnown RBP6.21□□□□□ -1.42
PTPRM-209ENST00000578698 SLC10A4Q96EP9 437 aa6.21□□□□□ -1.42
PTPRM-209ENST00000578698 ARID3CA6NKF2 412 aa6.2□□□□□ -1.42
PTPRM-209ENST00000578698 ERFEQ4G0M1 354 aa6.2□□□□□ -1.42
PTPRM-209ENST00000578698 INSM2Q96T92 566 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-209ENST00000578698 DHX9Q08211 1270 aaKnown RBP6.19□□□□□ -1.42
PTPRM-209ENST00000578698 LYPD4Q6UWN0 246 aa6.19□□□□□ -1.42
PTPRM-209ENST00000578698 KCTD15Q96SI1 283 aaPredicted RBP6.19□□□□□ -1.42
PTPRM-209ENST00000578698 ARHGAP9Q9BRR9 750 aa6.19□□□□□ -1.42
PTPRM-209ENST00000578698 LIMD1Q9UGP4 676 aa6.19□□□□□ -1.42
PTPRM-209ENST00000578698 MCM6Q14566 821 aa6.18□□□□□ -1.42
PTPRM-209ENST00000578698 SKIV2LQ15477 1246 aaKnown RBP6.18□□□□□ -1.42
PTPRM-209ENST00000578698 GPKOWQ92917 476 aaPredicted RBP eCLIP6.18□□□□□ -1.42
PTPRM-209ENST00000578698 ZNF395Q9H8N7 513 aaPredicted RBP6.18□□□□□ -1.42
PTPRM-209ENST00000578698 SRSF11Q05519 484 aaKnown RBP6.17□□□□□ -1.42
PTPRM-209ENST00000578698 XP32Q5T750 250 aa6.17□□□□□ -1.42
PTPRM-209ENST00000578698 MYSM1Q5VVJ2 828 aa6.17□□□□□ -1.42
PTPRM-209ENST00000578698 ZBTB33Q86T24 672 aa6.17□□□□□ -1.42
PTPRM-209ENST00000578698 ENAMQ9NRM1 1142 aa6.17□□□□□ -1.42
PTPRM-209ENST00000578698 APBB1O00213 710 aa6.16□□□□□ -1.42
PTPRM-209ENST00000578698 MSTNO14793 375 aa6.16□□□□□ -1.42
PTPRM-209ENST00000578698 LILRB3O75022 631 aa6.16□□□□□ -1.42
PTPRM-209ENST00000578698 CELA2BP08218 269 aaPredicted RBP6.16□□□□□ -1.42
PTPRM-209ENST00000578698 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
PTPRM-209ENST00000578698 CLUAP1Q96AJ1 413 aa6.16□□□□□ -1.42
PTPRM-209ENST00000578698 POLR3EQ9NVU0 708 aa6.16□□□□□ -1.42
PTPRM-209ENST00000578698 CDV3Q9UKY7 258 aaKnown RBP6.16□□□□□ -1.42
PTPRM-209ENST00000578698 SENP3-EIF4A1A0A087X0R7 540 aa6.15□□□□□ -1.42
PTPRM-209ENST00000578698 CLK2P49760 499 aaKnown RBP6.15□□□□□ -1.42
PTPRM-209ENST00000578698 RAB15P59190 212 aa6.15□□□□□ -1.42
PTPRM-209ENST00000578698 PLA2G4EQ3MJ16 856 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms