RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 HS1BP3Q53T59 392 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 ZC3H12AQ5D1E8 599 aaKnown RBP9.14□□□□□ -0.95
DDX42-207ENST00000578593 NOL7Q9UMY1 257 aaKnown RBP9.14□□□□□ -0.95
DDX42-207ENST00000578593 SHANK2Q9UPX8 1470 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 APAF1O14727 1248 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 TNNT1P13805 278 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 ANKRD23Q86SG2 305 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 MED4Q9NPJ6 270 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
DDX42-207ENST00000578593 ERBINQ96RT1 1412 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 IPO8O15397 1037 aaKnown RBP9.13□□□□□ -0.95
DDX42-207ENST00000578593 JARID2Q92833 1246 aaPredicted RBP9.13□□□□□ -0.95
DDX42-207ENST00000578593 TMX1Q9H3N1 280 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 RTEL1-TNFRSF6BF6WH68 1400 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 LAMC1P11047 1609 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 MPHOSPH10O00566 681 aaKnown RBP9.13□□□□□ -0.95
DDX42-207ENST00000578593 GTF2F1P35269 517 aaKnown RBP eCLIP9.13□□□□□ -0.95
DDX42-207ENST00000578593 FEZ1Q99689 392 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 SUFUQ9UMX1 484 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
DDX42-207ENST00000578593 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
DDX42-207ENST00000578593 PCDHB15Q9Y5E8 787 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 PRDM15P57071 1507 aaPredicted RBP9.12□□□□□ -0.95
DDX42-207ENST00000578593 KDM4AO75164 1064 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 TMF1P82094 1093 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 HSP90AB4PQ58FF6 505 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 TSC1Q92574 1164 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 C22orf23Q9BZE7 217 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 OGFRQ9NZT2 677 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 MAGI2Q86UL8 1455 aa9.12□□□□□ -0.95
DDX42-207ENST00000578593 C9orf84Q5VXU9 1444 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 CFAP65Q6ZU64 1925 aaKnown RBP9.11□□□□□ -0.95
DDX42-207ENST00000578593 PDCL2Q8N4E4 241 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 KIF13AQ9H1H9 1805 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 ABCA8O94911 1581 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 U2AF2P26368 475 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDX42-207ENST00000578593 BIRC2Q13490 618 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 MNS1Q8NEH6 495 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 KNSTRNQ9Y448 316 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
DDX42-207ENST00000578593 TERF2Q15554 542 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 PMFBP1Q8TBY8 1022 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 TNPO1Q92973 898 aaKnown RBP9.11□□□□□ -0.95
DDX42-207ENST00000578593 ZNF428Q96B54 188 aa9.11□□□□□ -0.95
DDX42-207ENST00000578593 NOL10Q9BSC4 688 aaKnown RBP9.11□□□□□ -0.95
DDX42-207ENST00000578593 NUP160Q12769 1436 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 ZMYM3Q14202 1370 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 KLHL33A6NCF5 533 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 LRCH2Q5VUJ6 765 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX42-207ENST00000578593 FAM135AQ9P2D6 1515 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 CDC42BPBQ9Y5S2 1711 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
DDX42-207ENST00000578593 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 CXorf56Q9H5V9 222 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 TOMM22Q9NS69 142 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 RPS6KL1Q9Y6S9 549 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 PLA2R1Q13018 1463 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 WDR7Q9Y4E6 1490 aa9.1□□□□□ -0.95
DDX42-207ENST00000578593 HSCBQ8IWL3 235 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 FAM177A1Q8N128 213 aaPredicted RBP9.09□□□□□ -0.95
DDX42-207ENST00000578593 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 TNNQ9UQP3 1299 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 RAD50Q92878 1312 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 RLBP1P12271 317 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 FOXD4L6Q3SYB3 417 aaPredicted RBP9.09□□□□□ -0.95
DDX42-207ENST00000578593 FOXD4L3Q6VB84 417 aaPredicted RBP9.09□□□□□ -0.95
DDX42-207ENST00000578593 PIK3R5Q8WYR1 880 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 A2MP01023 1474 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 ARHGEF5Q12774 1597 aa9.09□□□□□ -0.95
DDX42-207ENST00000578593 ABCC2Q92887 1545 aa9.09□□□□□ -0.96
DDX42-207ENST00000578593 POLD1P28340 1107 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 DDIT3P35638 169 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 FAM212AQ96EL1 285 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 CCDC144AA2RUR9 1427 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 NCOA3Q9Y6Q9 1424 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 FAM69CQ0P6D2 419 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 C11orf91Q3C1V1 193 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 C1QTNF12Q5T7M4 302 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 PLXNC1O60486 1568 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 SAMD9LQ8IVG5 1584 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 UNC13BO14795 1591 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 PIK3C2GO75747 1445 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
DDX42-207ENST00000578593 MCM5P33992 734 aa9.07□□□□□ -0.96
DDX42-207ENST00000578593 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
DDX42-207ENST00000578593 CCT2P78371 535 aaKnown RBP9.07□□□□□ -0.96
DDX42-207ENST00000578593 HMGN5P82970 282 aaKnown RBP9.07□□□□□ -0.96
DDX42-207ENST00000578593 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
DDX42-207ENST00000578593 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
DDX42-207ENST00000578593 ZKSCAN5Q9Y2L8 839 aa9.07□□□□□ -0.96
DDX42-207ENST00000578593 SHROOM2Q13796 1616 aa9.07□□□□□ -0.96
DDX42-207ENST00000578593 SWT1Q5T5J6 900 aaKnown RBP9.07□□□□□ -0.96
DDX42-207ENST00000578593 FAM210AQ96ND0 272 aa9.07□□□□□ -0.96
DDX42-207ENST00000578593 AK9Q5TCS8 1911 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms