RNA–Protein interactions for RNA: ENST00000578528.1

RPL17-201, Transcript of ribosomal protein L17, humanhuman

TSL 3

Gene RPL17, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-201ENST00000578528 IP6K1Q92551 441 aa31.61■■■□□ 2.65
RPL17-201ENST00000578528 SLIT2O94813 1529 aa31.6■■■□□ 2.65
RPL17-201ENST00000578528 MYBBP1AQ9BQG0 1328 aaKnown RBP31.6■■■□□ 2.65
RPL17-201ENST00000578528 CAMTA1Q9Y6Y1 1673 aa31.6■■■□□ 2.65
RPL17-201ENST00000578528 BLMP54132 1417 aaPredicted RBP31.59■■■□□ 2.65
RPL17-201ENST00000578528 HOXC9P31274 260 aa31.59■■■□□ 2.65
RPL17-201ENST00000578528 AMPHP49418 695 aa31.59■■■□□ 2.65
RPL17-201ENST00000578528 RGPD5Q99666 1765 aa31.58■■■□□ 2.65
RPL17-201ENST00000578528 MTHFSP49914 203 aa31.58■■■□□ 2.65
RPL17-201ENST00000578528 MEX3CQ5U5Q3 659 aaKnown RBP31.58■■■□□ 2.65
RPL17-201ENST00000578528 ZBTB7CA1YPR0 619 aa31.57■■■□□ 2.64
RPL17-201ENST00000578528 FNBP4Q8N3X1 1017 aaPredicted RBP31.57■■■□□ 2.64
RPL17-201ENST00000578528 C8orf37Q96NL8 207 aa31.57■■■□□ 2.64
RPL17-201ENST00000578528 AXIN2Q9Y2T1 843 aa31.57■■■□□ 2.64
RPL17-201ENST00000578528 INSRP06213 1382 aa31.56■■■□□ 2.64
RPL17-201ENST00000578528 NRAPQ86VF7 1730 aa31.55■■■□□ 2.64
RPL17-201ENST00000578528 NGLY1Q96IV0 654 aa31.54■■■□□ 2.64
RPL17-201ENST00000578528 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.53■■■□□ 2.64
RPL17-201ENST00000578528 PPM1GO15355 546 aaPredicted RBP31.53■■■□□ 2.64
RPL17-201ENST00000578528 COL5A2P05997 1499 aaPredicted RBP31.52■■■□□ 2.64
RPL17-201ENST00000578528 HSP90AB2PQ58FF8 381 aa31.52■■■□□ 2.64
RPL17-201ENST00000578528 BTG4Q9NY30 223 aa31.52■■■□□ 2.64
RPL17-201ENST00000578528 BCL9LQ86UU0 1499 aa31.51■■■□□ 2.63
RPL17-201ENST00000578528 COL3A1P02461 1466 aaPredicted RBP31.5■■■□□ 2.63
RPL17-201ENST00000578528 ERBB3P21860 1342 aa31.49■■■□□ 2.63
RPL17-201ENST00000578528 AFF2P51816 1311 aa31.48■■■□□ 2.63
RPL17-201ENST00000578528 FAM208AQ9UK61 1670 aaKnown RBP31.48■■■□□ 2.63
RPL17-201ENST00000578528 UNC5CLQ8IV45 518 aa31.46■■■□□ 2.63
RPL17-201ENST00000578528 ANKRD24Q8TF21 1146 aa31.46■■■□□ 2.63
RPL17-201ENST00000578528 CFAP53Q96M91 514 aa31.45■■■□□ 2.63
RPL17-201ENST00000578528 USP21Q9UK80 565 aa31.44■■■□□ 2.62
RPL17-201ENST00000578528 WDR17Q8IZU2 1322 aa31.44■■■□□ 2.62
RPL17-201ENST00000578528 EIF4A2Q14240 407 aaKnown RBP31.42■■■□□ 2.62
RPL17-201ENST00000578528 EVA1CP58658 441 aa31.41■■■□□ 2.62
RPL17-201ENST00000578528 IL13P35225 146 aa31.4■■■□□ 2.62
RPL17-201ENST00000578528 STRN4Q9NRL3 753 aa31.4■■■□□ 2.62
RPL17-201ENST00000578528 RGPD1P0DJD0 1748 aa31.39■■■□□ 2.62
RPL17-201ENST00000578528 DIAPH1O60610 1272 aaKnown RBP31.39■■■□□ 2.62
RPL17-201ENST00000578528 CRB1P82279 1406 aa31.39■■■□□ 2.62
RPL17-201ENST00000578528 VPS72Q15906 364 aa31.38■■■□□ 2.61
RPL17-201ENST00000578528 LARP1Q6PKG0 1096 aaKnown RBP31.38■■■□□ 2.61
RPL17-201ENST00000578528 LTV1Q96GA3 475 aaPredicted RBP31.38■■■□□ 2.61
RPL17-201ENST00000578528 ATRNO75882 1429 aa31.38■■■□□ 2.61
RPL17-201ENST00000578528 RGPD2P0DJD1 1756 aa31.38■■■□□ 2.61
RPL17-201ENST00000578528 NCAPD2Q15021 1401 aa31.36■■■□□ 2.61
RPL17-201ENST00000578528 CSB-PGBD3P0DP91 1061 aa31.36■■■□□ 2.61
RPL17-201ENST00000578528 ZNF772Q68DY9 489 aaPredicted RBP31.36■■■□□ 2.61
RPL17-201ENST00000578528 CARD10Q9BWT7 1032 aa31.34■■■□□ 2.61
RPL17-201ENST00000578528 TRPC5Q9UL62 973 aaPredicted RBP31.34■■■□□ 2.61
RPL17-201ENST00000578528 SPATA31A5Q5VU36 1347 aa31.33■■■□□ 2.61
RPL17-201ENST00000578528 SPATA31A7Q8IWB4 1347 aa31.33■■■□□ 2.61
RPL17-201ENST00000578528 IGSF1Q8N6C5 1336 aa31.33■■■□□ 2.61
RPL17-201ENST00000578528 TOM1L2Q6ZVM7 507 aa31.33■■■□□ 2.61
RPL17-201ENST00000578528 MIER1Q8N108 512 aa31.33■■■□□ 2.61
RPL17-201ENST00000578528 CCDC184Q52MB2 194 aa31.32■■■□□ 2.6
RPL17-201ENST00000578528 NBPF6Q5VWK0 638 aa31.32■■■□□ 2.6
RPL17-201ENST00000578528 NBPF4Q96M43 638 aa31.32■■■□□ 2.6
RPL17-201ENST00000578528 EYA1Q99502 592 aa31.32■■■□□ 2.6
RPL17-201ENST00000578528 RGS17Q9UGC6 210 aaPredicted RBP31.32■■■□□ 2.6
RPL17-201ENST00000578528 SPATA31A1Q5TZJ5 1347 aa31.31■■■□□ 2.6
RPL17-201ENST00000578528 CCER2I3L3R5 266 aa31.31■■■□□ 2.6
RPL17-201ENST00000578528 NLRP2Q9NX02 1062 aa31.31■■■□□ 2.6
RPL17-201ENST00000578528 NUDCQ9Y266 331 aa31.3■■■□□ 2.6
RPL17-201ENST00000578528 QTRT2Q9H974 415 aaKnown RBP31.29■■■□□ 2.6
RPL17-201ENST00000578528 GLI3P10071 1580 aa31.28■■■□□ 2.6
RPL17-201ENST00000578528 PHF23Q9BUL5 403 aaPredicted RBP31.28■■■□□ 2.6
RPL17-201ENST00000578528 MRS2Q9HD23 443 aa31.27■■■□□ 2.6
RPL17-201ENST00000578528 THRAP3Q9Y2W1 955 aaKnown RBP31.27■■■□□ 2.6
RPL17-201ENST00000578528 GJD4Q96KN9 370 aaPredicted RBP31.26■■■□□ 2.59
RPL17-201ENST00000578528 KDRP35968 1356 aa31.26■■■□□ 2.59
RPL17-201ENST00000578528 WNK3Q9BYP7 1800 aa31.25■■■□□ 2.59
RPL17-201ENST00000578528 TCP11L2Q8N4U5 519 aa31.24■■■□□ 2.59
RPL17-201ENST00000578528 BARGINQ6ZT62 677 aa31.23■■■□□ 2.59
RPL17-201ENST00000578528 CCDC9Q9Y3X0 531 aaKnown RBP31.23■■■□□ 2.59
RPL17-201ENST00000578528 U2SURPO15042 1029 aaKnown RBP31.22■■■□□ 2.59
RPL17-201ENST00000578528 USHBP1Q8N6Y0 703 aa31.21■■■□□ 2.59
RPL17-201ENST00000578528 DISP2A7MBM2 1401 aa31.21■■■□□ 2.59
RPL17-201ENST00000578528 USP35Q9P2H5 1018 aa31.2■■■□□ 2.59
RPL17-201ENST00000578528 PLEKHG2Q9H7P9 1386 aa31.19■■■□□ 2.58
RPL17-201ENST00000578528 U2AF1L5P0DN76 240 aaPredicted RBP31.19■■■□□ 2.58
RPL17-201ENST00000578528 U2AF1Q01081 240 aaKnown RBP eCLIP31.19■■■□□ 2.58
RPL17-201ENST00000578528 SULT6B1Q6IMI4 303 aa31.19■■■□□ 2.58
RPL17-201ENST00000578528 PNISRQ8TF01 805 aaKnown RBP31.19■■■□□ 2.58
RPL17-201ENST00000578528 RBM6P78332 1123 aaKnown RBP31.18■■■□□ 2.58
RPL17-201ENST00000578528 POTEAQ6S8J7 498 aa31.18■■■□□ 2.58
RPL17-201ENST00000578528 AEBP1Q8IUX7 1158 aa31.18■■■□□ 2.58
RPL17-201ENST00000578528 THSD7AQ9UPZ6 1657 aa31.17■■■□□ 2.58
RPL17-201ENST00000578528 ONECUT3O60422 494 aaPredicted RBP31.17■■■□□ 2.58
RPL17-201ENST00000578528 CDCA7Q9BWT1 371 aaPredicted RBP31.17■■■□□ 2.58
RPL17-201ENST00000578528 PARP4Q9UKK3 1724 aaKnown RBP31.17■■■□□ 2.58
RPL17-201ENST00000578528 WDR43Q15061 677 aaKnown RBP eCLIP31.16■■■□□ 2.58
RPL17-201ENST00000578528 MEGF6O75095 1541 aa31.15■■■□□ 2.58
RPL17-201ENST00000578528 FCHSD2O94868 740 aa31.15■■■□□ 2.58
RPL17-201ENST00000578528 HMOX1P09601 288 aa31.15■■■□□ 2.58
RPL17-201ENST00000578528 IL2RBP14784 551 aa31.15■■■□□ 2.58
RPL17-201ENST00000578528 RSPH6AQ9H0K4 717 aa31.14■■■□□ 2.58
RPL17-201ENST00000578528 RAPGEF4Q8WZA2 1011 aa31.13■■■□□ 2.57
RPL17-201ENST00000578528 OVOS2A0A0G2JMS6 1433 aa31.13■■■□□ 2.57
RPL17-201ENST00000578528 RXRBP28702 533 aa31.12■■■□□ 2.57
RPL17-201ENST00000578528 FAM98CQ17RN3 349 aaKnown RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms