RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CGNL1Q0VF96 1302 aa29.9■■■□□ 2.38
CDC42EP4-203ENST00000578516 RXRBP28702 533 aa29.89■■■□□ 2.38
CDC42EP4-203ENST00000578516 MAP2P11137 1827 aaKnown RBP29.89■■■□□ 2.38
CDC42EP4-203ENST00000578516 BRWD3Q6RI45 1802 aa29.89■■■□□ 2.38
CDC42EP4-203ENST00000578516 RBM6P78332 1123 aaKnown RBP29.87■■■□□ 2.37
CDC42EP4-203ENST00000578516 RRS1Q15050 365 aaKnown RBP29.87■■■□□ 2.37
CDC42EP4-203ENST00000578516 VPS72Q15906 364 aa29.87■■■□□ 2.37
CDC42EP4-203ENST00000578516 RGPD2P0DJD1 1756 aa29.87■■■□□ 2.37
CDC42EP4-203ENST00000578516 LARP1Q6PKG0 1096 aaKnown RBP29.86■■■□□ 2.37
CDC42EP4-203ENST00000578516 GJD4Q96KN9 370 aaPredicted RBP29.86■■■□□ 2.37
CDC42EP4-203ENST00000578516 MAP3K19Q56UN5 1328 aa29.86■■■□□ 2.37
CDC42EP4-203ENST00000578516 ABCC6O95255 1503 aa29.85■■■□□ 2.37
CDC42EP4-203ENST00000578516 WNK3Q9BYP7 1800 aa29.85■■■□□ 2.37
CDC42EP4-203ENST00000578516 TNNT2P45379 298 aaPredicted RBP29.82■■■□□ 2.36
CDC42EP4-203ENST00000578516 CNGB1Q14028 1251 aaPredicted RBP29.82■■■□□ 2.36
CDC42EP4-203ENST00000578516 SPATA31A5Q5VU36 1347 aa29.81■■■□□ 2.36
CDC42EP4-203ENST00000578516 SPATA31A7Q8IWB4 1347 aa29.81■■■□□ 2.36
CDC42EP4-203ENST00000578516 EVA1CP58658 441 aa29.81■■■□□ 2.36
CDC42EP4-203ENST00000578516 CDK12Q9NYV4 1490 aaPredicted RBP29.8■■■□□ 2.36
CDC42EP4-203ENST00000578516 PER1O15534 1290 aaPredicted RBP29.8■■■□□ 2.36
CDC42EP4-203ENST00000578516 AMER1Q5JTC6 1135 aaPredicted RBP29.8■■■□□ 2.36
CDC42EP4-203ENST00000578516 USP35Q9P2H5 1018 aa29.8■■■□□ 2.36
CDC42EP4-203ENST00000578516 KNSTRNQ9Y448 316 aa29.8■■■□□ 2.36
CDC42EP4-203ENST00000578516 THSD7AQ9UPZ6 1657 aa29.79■■■□□ 2.36
CDC42EP4-203ENST00000578516 EMILIN1Q9Y6C2 1016 aa29.78■■■□□ 2.36
CDC42EP4-203ENST00000578516 SPATA31A1Q5TZJ5 1347 aa29.77■■■□□ 2.36
CDC42EP4-203ENST00000578516 FAM98CQ17RN3 349 aaKnown RBP29.76■■■□□ 2.35
CDC42EP4-203ENST00000578516 NSD2O96028 1365 aa29.76■■■□□ 2.35
CDC42EP4-203ENST00000578516 HOXC9P31274 260 aa29.75■■■□□ 2.35
CDC42EP4-203ENST00000578516 CRB1P82279 1406 aa29.75■■■□□ 2.35
CDC42EP4-203ENST00000578516 CC2D1BQ5T0F9 858 aaKnown RBP29.75■■■□□ 2.35
CDC42EP4-203ENST00000578516 LTV1Q96GA3 475 aaPredicted RBP29.75■■■□□ 2.35
CDC42EP4-203ENST00000578516 WDR17Q8IZU2 1322 aa29.73■■■□□ 2.35
CDC42EP4-203ENST00000578516 FAM208AQ9UK61 1670 aaKnown RBP29.73■■■□□ 2.35
CDC42EP4-203ENST00000578516 AMPHP49418 695 aa29.73■■■□□ 2.35
CDC42EP4-203ENST00000578516 IP6K1Q92551 441 aa29.73■■■□□ 2.35
CDC42EP4-203ENST00000578516 ERBB3P21860 1342 aa29.72■■■□□ 2.35
CDC42EP4-203ENST00000578516 BLMP54132 1417 aaPredicted RBP29.72■■■□□ 2.35
CDC42EP4-203ENST00000578516 CSB-PGBD3P0DP91 1061 aa29.72■■■□□ 2.35
CDC42EP4-203ENST00000578516 ANKRD24Q8TF21 1146 aa29.72■■■□□ 2.35
CDC42EP4-203ENST00000578516 TOM1L2Q6ZVM7 507 aa29.71■■■□□ 2.35
CDC42EP4-203ENST00000578516 RTL1A6NKG5 1358 aa29.71■■■□□ 2.35
CDC42EP4-203ENST00000578516 MORC1Q86VD1 984 aa29.7■■■□□ 2.35
CDC42EP4-203ENST00000578516 A0A0G2JS52 829 aa29.69■■■□□ 2.34
CDC42EP4-203ENST00000578516 MYT1Q01538 1121 aa29.69■■■□□ 2.34
CDC42EP4-203ENST00000578516 SEPT12Q8IYM1 358 aa29.69■■■□□ 2.34
CDC42EP4-203ENST00000578516 LRRC37A3O60309 1634 aa29.69■■■□□ 2.34
CDC42EP4-203ENST00000578516 PPM1GO15355 546 aaPredicted RBP29.68■■■□□ 2.34
CDC42EP4-203ENST00000578516 HSP90AB2PQ58FF8 381 aa29.68■■■□□ 2.34
CDC42EP4-203ENST00000578516 PARP4Q9UKK3 1724 aaKnown RBP29.68■■■□□ 2.34
CDC42EP4-203ENST00000578516 POLKQ9UBT6 870 aa29.67■■■□□ 2.34
CDC42EP4-203ENST00000578516 FLT4P35916 1363 aa29.66■■■□□ 2.34
CDC42EP4-203ENST00000578516 DDX10Q13206 875 aaKnown RBP29.65■■■□□ 2.34
CDC42EP4-203ENST00000578516 TCP11L2Q8N4U5 519 aa29.65■■■□□ 2.34
CDC42EP4-203ENST00000578516 SMG6Q86US8 1419 aaKnown RBP29.64■■■□□ 2.34
CDC42EP4-203ENST00000578516 NLRP2Q9NX02 1062 aa29.64■■■□□ 2.34
CDC42EP4-203ENST00000578516 ONECUT3O60422 494 aaPredicted RBP29.62■■■□□ 2.33
CDC42EP4-203ENST00000578516 INSRP06213 1382 aa29.62■■■□□ 2.33
CDC42EP4-203ENST00000578516 NPC1L1Q9UHC9 1359 aa29.61■■■□□ 2.33
CDC42EP4-203ENST00000578516 DISP2A7MBM2 1401 aa29.61■■■□□ 2.33
CDC42EP4-203ENST00000578516 USHBP1Q8N6Y0 703 aa29.6■■■□□ 2.33
CDC42EP4-203ENST00000578516 CARD10Q9BWT7 1032 aa29.6■■■□□ 2.33
CDC42EP4-203ENST00000578516 FAM182BQ5T319 152 aa29.59■■■□□ 2.33
CDC42EP4-203ENST00000578516 BARGINQ6ZT62 677 aa29.59■■■□□ 2.33
CDC42EP4-203ENST00000578516 KIF24Q5T7B8 1368 aa29.58■■■□□ 2.33
CDC42EP4-203ENST00000578516 SHANK3Q9BYB0 1731 aa29.55■■■□□ 2.32
CDC42EP4-203ENST00000578516 SOCS7O14512 581 aa29.55■■■□□ 2.32
CDC42EP4-203ENST00000578516 NBPF6Q5VWK0 638 aa29.54■■■□□ 2.32
CDC42EP4-203ENST00000578516 NBPF4Q96M43 638 aa29.54■■■□□ 2.32
CDC42EP4-203ENST00000578516 THRAP3Q9Y2W1 955 aaKnown RBP29.54■■■□□ 2.32
CDC42EP4-203ENST00000578516 MEGF6O75095 1541 aa29.53■■■□□ 2.32
CDC42EP4-203ENST00000578516 ZNF316A6NFI3 1004 aaPredicted RBP29.52■■■□□ 2.32
CDC42EP4-203ENST00000578516 KRT27Q7Z3Y8 459 aa29.52■■■□□ 2.32
CDC42EP4-203ENST00000578516 EIF4A2Q14240 407 aaKnown RBP29.51■■■□□ 2.31
CDC42EP4-203ENST00000578516 RGPD1P0DJD0 1748 aa29.5■■■□□ 2.31
CDC42EP4-203ENST00000578516 MTHFSP49914 203 aa29.49■■■□□ 2.31
CDC42EP4-203ENST00000578516 COL3A1P02461 1466 aaPredicted RBP29.48■■■□□ 2.31
CDC42EP4-203ENST00000578516 TNS2Q63HR2 1409 aa29.47■■■□□ 2.31
CDC42EP4-203ENST00000578516 EYA1Q99502 592 aa29.45■■■□□ 2.31
CDC42EP4-203ENST00000578516 EP400Q96L91 3159 aa29.45■■■□□ 2.3
CDC42EP4-203ENST00000578516 SBF2Q86WG5 1849 aa29.45■■■□□ 2.3
CDC42EP4-203ENST00000578516 NCAPD2Q15021 1401 aa29.45■■■□□ 2.3
CDC42EP4-203ENST00000578516 IL2RBP14784 551 aa29.44■■■□□ 2.3
CDC42EP4-203ENST00000578516 TNS1Q9HBL0 1735 aaKnown RBP29.43■■■□□ 2.3
CDC42EP4-203ENST00000578516 PARD3Q8TEW0 1356 aa29.43■■■□□ 2.3
CDC42EP4-203ENST00000578516 DDB1Q16531 1140 aa29.43■■■□□ 2.3
CDC42EP4-203ENST00000578516 UPF1Q92900 1129 aaKnown RBP eCLIP29.43■■■□□ 2.3
CDC42EP4-203ENST00000578516 PPP2R1AP30153 589 aa29.42■■■□□ 2.3
CDC42EP4-203ENST00000578516 PKD1L3Q7Z443 1732 aa29.41■■■□□ 2.3
CDC42EP4-203ENST00000578516 PDE3BQ13370 1112 aa29.4■■■□□ 2.3
CDC42EP4-203ENST00000578516 OVOS2A0A0G2JMS6 1433 aa29.39■■■□□ 2.3
CDC42EP4-203ENST00000578516 MARCH10Q8NA82 808 aaPredicted RBP29.39■■■□□ 2.3
CDC42EP4-203ENST00000578516 CDCA7Q9BWT1 371 aaPredicted RBP29.38■■■□□ 2.29
CDC42EP4-203ENST00000578516 IL13P35225 146 aa29.37■■■□□ 2.29
CDC42EP4-203ENST00000578516 AEBP1Q8IUX7 1158 aa29.37■■■□□ 2.29
CDC42EP4-203ENST00000578516 IGSF1Q8N6C5 1336 aa29.37■■■□□ 2.29
CDC42EP4-203ENST00000578516 DOT1LQ8TEK3 1739 aa29.34■■■□□ 2.29
CDC42EP4-203ENST00000578516 EXOC5O00471 708 aa29.34■■■□□ 2.29
CDC42EP4-203ENST00000578516 KAT6BQ8WYB5 2073 aa29.33■■■□□ 2.29
CDC42EP4-203ENST00000578516 RAPGEF4Q8WZA2 1011 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms