RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 WIPF1O43516 503 aa8.14□□□□□ -1.11
TOP2A-204ENST00000578412 PTK2Q05397 1052 aa8.14□□□□□ -1.11
TOP2A-204ENST00000578412 SCARF1Q14162 830 aa8.14□□□□□ -1.11
TOP2A-204ENST00000578412 C6orf118Q5T5N4 469 aa8.14□□□□□ -1.11
TOP2A-204ENST00000578412 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
TOP2A-204ENST00000578412 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
TOP2A-204ENST00000578412 PNMA1Q8ND90 353 aa8.13□□□□□ -1.11
TOP2A-204ENST00000578412 MAP4K5Q9Y4K4 846 aa8.13□□□□□ -1.11
TOP2A-204ENST00000578412 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
TOP2A-204ENST00000578412 CCDC116Q8IYX3 515 aa8.12□□□□□ -1.11
TOP2A-204ENST00000578412 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
TOP2A-204ENST00000578412 OCSTAMPQ9BR26 566 aa8.12□□□□□ -1.11
TOP2A-204ENST00000578412 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
TOP2A-204ENST00000578412 TERTO14746 1132 aaKnown RBP8.11□□□□□ -1.11
TOP2A-204ENST00000578412 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
TOP2A-204ENST00000578412 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
TOP2A-204ENST00000578412 UPP2O95045 317 aa8.1□□□□□ -1.11
TOP2A-204ENST00000578412 BMP2P12643 396 aa8.1□□□□□ -1.11
TOP2A-204ENST00000578412 RAB15P59190 212 aa8.1□□□□□ -1.11
TOP2A-204ENST00000578412 PPP1R26Q5T8A7 1209 aaPredicted RBP8.1□□□□□ -1.11
TOP2A-204ENST00000578412 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
TOP2A-204ENST00000578412 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
TOP2A-204ENST00000578412 VEGFBP49765 207 aa8.09□□□□□ -1.11
TOP2A-204ENST00000578412 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
TOP2A-204ENST00000578412 CBLBQ13191 982 aa8.08□□□□□ -1.12
TOP2A-204ENST00000578412 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
TOP2A-204ENST00000578412 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
TOP2A-204ENST00000578412 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
TOP2A-204ENST00000578412 PGPEP1Q9NXJ5 209 aa8.07□□□□□ -1.12
TOP2A-204ENST00000578412 NXF1Q9UBU9 619 aaKnown RBP8.07□□□□□ -1.12
TOP2A-204ENST00000578412 CDV3Q9UKY7 258 aaKnown RBP8.07□□□□□ -1.12
TOP2A-204ENST00000578412 INTS6LQ5JSJ4 861 aaKnown RBP8.06□□□□□ -1.12
TOP2A-204ENST00000578412 MAN1A2O60476 641 aa8.05□□□□□ -1.12
TOP2A-204ENST00000578412 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
TOP2A-204ENST00000578412 GJD4Q96KN9 370 aaPredicted RBP8.05□□□□□ -1.12
TOP2A-204ENST00000578412 CECR2Q9BXF3 1484 aa8.05□□□□□ -1.12
TOP2A-204ENST00000578412 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
TOP2A-204ENST00000578412 SLC16A10Q8TF71 515 aa8.04□□□□□ -1.12
TOP2A-204ENST00000578412 TSEN34Q9BSV6 310 aaKnown RBP8.04□□□□□ -1.12
TOP2A-204ENST00000578412 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
TOP2A-204ENST00000578412 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
TOP2A-204ENST00000578412 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
TOP2A-204ENST00000578412 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
TOP2A-204ENST00000578412 SNRKQ9NRH2 765 aa8.03□□□□□ -1.12
TOP2A-204ENST00000578412 PCDHB9Q9Y5E1 797 aa8.03□□□□□ -1.12
TOP2A-204ENST00000578412 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
TOP2A-204ENST00000578412 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
TOP2A-204ENST00000578412 FIGNL2A6NMB9 653 aa8.01□□□□□ -1.13
TOP2A-204ENST00000578412 RELBQ01201 579 aa8.01□□□□□ -1.13
TOP2A-204ENST00000578412 Q6ZVU0 165 aa8.01□□□□□ -1.13
TOP2A-204ENST00000578412 MTMR14Q8NCE2 650 aa8.01□□□□□ -1.13
TOP2A-204ENST00000578412 BANK1Q8NDB2 785 aa8.01□□□□□ -1.13
TOP2A-204ENST00000578412 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
TOP2A-204ENST00000578412 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
TOP2A-204ENST00000578412 ZNF395Q9H8N7 513 aaPredicted RBP8□□□□□ -1.13
TOP2A-204ENST00000578412 DNMT3LQ9UJW3 386 aa8□□□□□ -1.13
TOP2A-204ENST00000578412 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
TOP2A-204ENST00000578412 TTLL8A6PVC2 850 aa7.99□□□□□ -1.13
TOP2A-204ENST00000578412 H3BM21 787 aa7.99□□□□□ -1.13
TOP2A-204ENST00000578412 GIGYF1O75420 1035 aaPredicted RBP7.99□□□□□ -1.13
TOP2A-204ENST00000578412 INSM1Q01101 510 aaPredicted RBP7.99□□□□□ -1.13
TOP2A-204ENST00000578412 IRF7Q92985 503 aa7.98□□□□□ -1.13
TOP2A-204ENST00000578412 NDUFB9Q9Y6M9 179 aa7.98□□□□□ -1.13
TOP2A-204ENST00000578412 ERBB4Q15303 1308 aa7.98□□□□□ -1.13
TOP2A-204ENST00000578412 ESPNB1AK53 854 aa7.97□□□□□ -1.13
TOP2A-204ENST00000578412 GMPRP36959 345 aa7.97□□□□□ -1.13
TOP2A-204ENST00000578412 NPAS3Q8IXF0 933 aa7.97□□□□□ -1.13
TOP2A-204ENST00000578412 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
TOP2A-204ENST00000578412 POLMQ9NP87 494 aaPredicted RBP7.97□□□□□ -1.13
TOP2A-204ENST00000578412 CYLDQ9NQC7 956 aa7.97□□□□□ -1.13
TOP2A-204ENST00000578412 UNC13AQ9UPW8 1703 aa7.97□□□□□ -1.13
TOP2A-204ENST00000578412 CC2D2AQ9P2K1 1620 aa7.96□□□□□ -1.13
TOP2A-204ENST00000578412 SHROOM4Q9ULL8 1493 aa7.96□□□□□ -1.13
TOP2A-204ENST00000578412 SPINT1O43278 529 aa7.96□□□□□ -1.14
TOP2A-204ENST00000578412 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
TOP2A-204ENST00000578412 CTSOP43234 321 aaPredicted RBP7.96□□□□□ -1.14
TOP2A-204ENST00000578412 NR1H3Q13133 447 aa7.96□□□□□ -1.14
TOP2A-204ENST00000578412 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.96□□□□□ -1.14
TOP2A-204ENST00000578412 APBB1O00213 710 aa7.95□□□□□ -1.14
TOP2A-204ENST00000578412 LILRA1O75019 489 aa7.95□□□□□ -1.14
TOP2A-204ENST00000578412 BICRAQ9NZM4 1560 aa7.95□□□□□ -1.14
TOP2A-204ENST00000578412 GPR37L1O60883 481 aa7.94□□□□□ -1.14
TOP2A-204ENST00000578412 PPFIA3O75145 1194 aa7.94□□□□□ -1.14
TOP2A-204ENST00000578412 TBC1D2BQ9UPU7 963 aa7.94□□□□□ -1.14
TOP2A-204ENST00000578412 ADH1AP07327 375 aa7.93□□□□□ -1.14
TOP2A-204ENST00000578412 PTSQ03393 145 aa7.93□□□□□ -1.14
TOP2A-204ENST00000578412 SEPT12Q8IYM1 358 aa7.93□□□□□ -1.14
TOP2A-204ENST00000578412 ZNF330Q9Y3S2 320 aaPredicted RBP7.93□□□□□ -1.14
TOP2A-204ENST00000578412 MYO15BQ96JP2 1530 aa7.92□□□□□ -1.14
TOP2A-204ENST00000578412 PTGIRP43119 386 aa7.91□□□□□ -1.14
TOP2A-204ENST00000578412 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
TOP2A-204ENST00000578412 SOCS7O14512 581 aa7.9□□□□□ -1.14
TOP2A-204ENST00000578412 RNF20Q5VTR2 975 aa7.9□□□□□ -1.14
TOP2A-204ENST00000578412 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
TOP2A-204ENST00000578412 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
TOP2A-204ENST00000578412 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
TOP2A-204ENST00000578412 CCDC155Q8N6L0 562 aa7.89□□□□□ -1.15
TOP2A-204ENST00000578412 RNF217Q8TC41 542 aa7.89□□□□□ -1.15
TOP2A-204ENST00000578412 ESF1Q9H501 851 aaKnown RBP7.89□□□□□ -1.15
TOP2A-204ENST00000578412 MEN1O00255 615 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms