RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
SLC46A1-201ENST00000578217 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
SLC46A1-201ENST00000578217 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
SLC46A1-201ENST00000578217 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
SLC46A1-201ENST00000578217 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
SLC46A1-201ENST00000578217 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
SLC46A1-201ENST00000578217 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
SLC46A1-201ENST00000578217 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
SLC46A1-201ENST00000578217 C14orf93Q9H972 538 aaKnown RBP12.17□□□□□ -0.46
SLC46A1-201ENST00000578217 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
SLC46A1-201ENST00000578217 ANKRD30BQ9BXX2 1392 aa12.17□□□□□ -0.46
SLC46A1-201ENST00000578217 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
SLC46A1-201ENST00000578217 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
SLC46A1-201ENST00000578217 TCP11L2Q8N4U5 519 aa12.15□□□□□ -0.46
SLC46A1-201ENST00000578217 LMO7Q8WWI1 1683 aa12.15□□□□□ -0.46
SLC46A1-201ENST00000578217 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
SLC46A1-201ENST00000578217 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
SLC46A1-201ENST00000578217 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
SLC46A1-201ENST00000578217 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
SLC46A1-201ENST00000578217 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
SLC46A1-201ENST00000578217 PLSCR1O15162 318 aa12.13□□□□□ -0.47
SLC46A1-201ENST00000578217 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
SLC46A1-201ENST00000578217 SHANK3Q9BYB0 1731 aa12.13□□□□□ -0.47
SLC46A1-201ENST00000578217 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
SLC46A1-201ENST00000578217 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
SLC46A1-201ENST00000578217 EVA1CP58658 441 aa12.12□□□□□ -0.47
SLC46A1-201ENST00000578217 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
SLC46A1-201ENST00000578217 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 MIER1Q8N108 512 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 POGKQ9P215 609 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 DLC1Q96QB1 1528 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
SLC46A1-201ENST00000578217 ADGRB1O14514 1584 aa12.1□□□□□ -0.47
SLC46A1-201ENST00000578217 GABBR2O75899 941 aa12.1□□□□□ -0.47
SLC46A1-201ENST00000578217 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
SLC46A1-201ENST00000578217 ATP7BP35670 1465 aa12.09□□□□□ -0.47
SLC46A1-201ENST00000578217 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
SLC46A1-201ENST00000578217 TRAK1Q9UPV9 953 aa12.09□□□□□ -0.47
SLC46A1-201ENST00000578217 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
SLC46A1-201ENST00000578217 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
SLC46A1-201ENST00000578217 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
SLC46A1-201ENST00000578217 TXNRD1Q16881 649 aa12.08□□□□□ -0.48
SLC46A1-201ENST00000578217 ARXQ96QS3 562 aa12.07□□□□□ -0.48
SLC46A1-201ENST00000578217 MTFR1LQ9H019 292 aa12.07□□□□□ -0.48
SLC46A1-201ENST00000578217 CPDO75976 1380 aa12.06□□□□□ -0.48
SLC46A1-201ENST00000578217 GPR162Q16538 588 aa12.06□□□□□ -0.48
SLC46A1-201ENST00000578217 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
SLC46A1-201ENST00000578217 THRAP3Q9Y2W1 955 aaKnown RBP12.06□□□□□ -0.48
SLC46A1-201ENST00000578217 USP19O94966 1318 aa12.06□□□□□ -0.48
SLC46A1-201ENST00000578217 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
SLC46A1-201ENST00000578217 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
SLC46A1-201ENST00000578217 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
SLC46A1-201ENST00000578217 LHX8Q68G74 356 aa12.04□□□□□ -0.48
SLC46A1-201ENST00000578217 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
SLC46A1-201ENST00000578217 CRB1P82279 1406 aa12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 DDB1Q16531 1140 aa12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 ACEP12821 1306 aa12.03□□□□□ -0.48
SLC46A1-201ENST00000578217 WNK3Q9BYP7 1800 aa12.02□□□□□ -0.48
SLC46A1-201ENST00000578217 GCP02774 474 aa12.02□□□□□ -0.49
SLC46A1-201ENST00000578217 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.49
SLC46A1-201ENST00000578217 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.49
SLC46A1-201ENST00000578217 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
SLC46A1-201ENST00000578217 TOPAZ1Q8N9V7 1692 aa12.01□□□□□ -0.49
SLC46A1-201ENST00000578217 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
SLC46A1-201ENST00000578217 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
SLC46A1-201ENST00000578217 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
SLC46A1-201ENST00000578217 EIF3AQ14152 1382 aaKnown RBP12.01□□□□□ -0.49
SLC46A1-201ENST00000578217 BCL9O00512 1426 aa12.01□□□□□ -0.49
SLC46A1-201ENST00000578217 COL18A1P39060 1754 aa12□□□□□ -0.49
SLC46A1-201ENST00000578217 AKAP12Q02952 1782 aa12□□□□□ -0.49
SLC46A1-201ENST00000578217 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
SLC46A1-201ENST00000578217 KLHL34Q8N239 644 aa12□□□□□ -0.49
SLC46A1-201ENST00000578217 ABTB2Q8N961 1025 aa12□□□□□ -0.49
SLC46A1-201ENST00000578217 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
SLC46A1-201ENST00000578217 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
SLC46A1-201ENST00000578217 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
SLC46A1-201ENST00000578217 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
SLC46A1-201ENST00000578217 ARHGEF28Q8N1W1 1705 aaKnown RBP11.98□□□□□ -0.49
SLC46A1-201ENST00000578217 HSPA6P17066 643 aa11.98□□□□□ -0.49
SLC46A1-201ENST00000578217 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
SLC46A1-201ENST00000578217 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
SLC46A1-201ENST00000578217 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
SLC46A1-201ENST00000578217 RGPD5Q99666 1765 aa11.97□□□□□ -0.49
SLC46A1-201ENST00000578217 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
SLC46A1-201ENST00000578217 ACSBG1Q96GR2 724 aa11.96□□□□□ -0.49
SLC46A1-201ENST00000578217 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
SLC46A1-201ENST00000578217 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
SLC46A1-201ENST00000578217 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
SLC46A1-201ENST00000578217 KCNQ4P56696 695 aa11.94□□□□□ -0.5
SLC46A1-201ENST00000578217 ZNF526Q8TF50 670 aaPredicted RBP11.94□□□□□ -0.5
SLC46A1-201ENST00000578217 BTAF1O14981 1849 aa11.94□□□□□ -0.5
SLC46A1-201ENST00000578217 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
SLC46A1-201ENST00000578217 PNPLA7Q6ZV29 1317 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms