RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 AXIN2Q9Y2T1 843 aa23.64■■□□□ 1.37
CDK5RAP3-206ENST00000578018 ABCC6O95255 1503 aa23.64■■□□□ 1.37
CDK5RAP3-206ENST00000578018 WDR17Q8IZU2 1322 aa23.62■■□□□ 1.37
CDK5RAP3-206ENST00000578018 EZH2Q15910 746 aaKnown RBP23.62■■□□□ 1.37
CDK5RAP3-206ENST00000578018 CAMKK2Q96RR4 588 aa23.62■■□□□ 1.37
CDK5RAP3-206ENST00000578018 PARD3Q8TEW0 1356 aa23.62■■□□□ 1.37
CDK5RAP3-206ENST00000578018 SOX12O15370 315 aa23.61■■□□□ 1.37
CDK5RAP3-206ENST00000578018 TOM1L2Q6ZVM7 507 aa23.61■■□□□ 1.37
CDK5RAP3-206ENST00000578018 USP31Q70CQ4 1352 aa23.61■■□□□ 1.37
CDK5RAP3-206ENST00000578018 NUP188Q5SRE5 1749 aa23.61■■□□□ 1.37
CDK5RAP3-206ENST00000578018 APBA3O96018 575 aa23.6■■□□□ 1.37
CDK5RAP3-206ENST00000578018 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
CDK5RAP3-206ENST00000578018 OVOS2A0A0J9YW53 1432 aa23.59■■□□□ 1.37
CDK5RAP3-206ENST00000578018 OVOS2Q6IE36 1432 aa23.59■■□□□ 1.37
CDK5RAP3-206ENST00000578018 SBF2Q86WG5 1849 aa23.59■■□□□ 1.37
CDK5RAP3-206ENST00000578018 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
CDK5RAP3-206ENST00000578018 LTN1O94822 1766 aa23.58■■□□□ 1.37
CDK5RAP3-206ENST00000578018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.37
CDK5RAP3-206ENST00000578018 TMC1Q8TDI8 760 aa23.57■■□□□ 1.36
CDK5RAP3-206ENST00000578018 EDC4Q6P2E9 1401 aaKnown RBP23.57■■□□□ 1.36
CDK5RAP3-206ENST00000578018 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
CDK5RAP3-206ENST00000578018 R3HDM1Q15032 1099 aaKnown RBP23.56■■□□□ 1.36
CDK5RAP3-206ENST00000578018 NME9Q86XW9 330 aa23.56■■□□□ 1.36
CDK5RAP3-206ENST00000578018 SLC12A5Q9H2X9 1139 aa23.56■■□□□ 1.36
CDK5RAP3-206ENST00000578018 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
CDK5RAP3-206ENST00000578018 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
CDK5RAP3-206ENST00000578018 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
CDK5RAP3-206ENST00000578018 DDB1Q16531 1140 aa23.55■■□□□ 1.36
CDK5RAP3-206ENST00000578018 PUS7Q96PZ0 661 aaKnown RBP23.55■■□□□ 1.36
CDK5RAP3-206ENST00000578018 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
CDK5RAP3-206ENST00000578018 TESK2Q96S53 571 aa23.54■■□□□ 1.36
CDK5RAP3-206ENST00000578018 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
CDK5RAP3-206ENST00000578018 CARD10Q9BWT7 1032 aa23.53■■□□□ 1.36
CDK5RAP3-206ENST00000578018 CSB-PGBD3P0DP91 1061 aa23.52■■□□□ 1.36
CDK5RAP3-206ENST00000578018 TERF2IPQ9NYB0 399 aa23.51■■□□□ 1.35
CDK5RAP3-206ENST00000578018 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
CDK5RAP3-206ENST00000578018 NINLQ9Y2I6 1382 aa23.51■■□□□ 1.35
CDK5RAP3-206ENST00000578018 ST20-MTHFSA0A0A6YYL1 179 aa23.5■■□□□ 1.35
CDK5RAP3-206ENST00000578018 BCL9O00512 1426 aa23.5■■□□□ 1.35
CDK5RAP3-206ENST00000578018 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
CDK5RAP3-206ENST00000578018 ERBB3P21860 1342 aa23.48■■□□□ 1.35
CDK5RAP3-206ENST00000578018 TNS2Q63HR2 1409 aa23.47■■□□□ 1.35
CDK5RAP3-206ENST00000578018 PTF1AQ7RTS3 328 aa23.44■■□□□ 1.34
CDK5RAP3-206ENST00000578018 USP47Q96K76 1375 aa23.43■■□□□ 1.34
CDK5RAP3-206ENST00000578018 SLC24A1O60721 1099 aa23.43■■□□□ 1.34
CDK5RAP3-206ENST00000578018 BCL11BQ9C0K0 894 aaPredicted RBP23.43■■□□□ 1.34
CDK5RAP3-206ENST00000578018 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
CDK5RAP3-206ENST00000578018 NBPF14Q5TI25 921 aa23.42■■□□□ 1.34
CDK5RAP3-206ENST00000578018 EXOC5O00471 708 aa23.41■■□□□ 1.34
CDK5RAP3-206ENST00000578018 PLSCR1O15162 318 aa23.41■■□□□ 1.34
CDK5RAP3-206ENST00000578018 ANKRD36BQ8N2N9 1353 aa23.4■■□□□ 1.34
CDK5RAP3-206ENST00000578018 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
CDK5RAP3-206ENST00000578018 NLRP2Q9NX02 1062 aa23.4■■□□□ 1.34
CDK5RAP3-206ENST00000578018 NHSQ6T4R5 1651 aa23.4■■□□□ 1.34
CDK5RAP3-206ENST00000578018 IL2RBP14784 551 aa23.36■■□□□ 1.33
CDK5RAP3-206ENST00000578018 TMF1P82094 1093 aa23.36■■□□□ 1.33
CDK5RAP3-206ENST00000578018 IP6K1Q92551 441 aa23.35■■□□□ 1.33
CDK5RAP3-206ENST00000578018 COG3Q96JB2 828 aa23.35■■□□□ 1.33
CDK5RAP3-206ENST00000578018 CASZ1Q86V15 1759 aa23.35■■□□□ 1.33
CDK5RAP3-206ENST00000578018 ANO8Q9HCE9 1232 aaPredicted RBP23.34■■□□□ 1.33
CDK5RAP3-206ENST00000578018 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
CDK5RAP3-206ENST00000578018 MYOM1P52179 1685 aa23.33■■□□□ 1.33
CDK5RAP3-206ENST00000578018 PROM2Q8N271 834 aa23.33■■□□□ 1.33
CDK5RAP3-206ENST00000578018 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.32
CDK5RAP3-206ENST00000578018 RGPD2P0DJD1 1756 aa23.32■■□□□ 1.32
CDK5RAP3-206ENST00000578018 BTAF1O14981 1849 aa23.31■■□□□ 1.32
CDK5RAP3-206ENST00000578018 KCNQ2O43526 872 aa23.3■■□□□ 1.32
CDK5RAP3-206ENST00000578018 KAT6BQ8WYB5 2073 aa23.29■■□□□ 1.32
CDK5RAP3-206ENST00000578018 RTL1A6NKG5 1358 aa23.29■■□□□ 1.32
CDK5RAP3-206ENST00000578018 FBLN1P23142 703 aa23.29■■□□□ 1.32
CDK5RAP3-206ENST00000578018 HOXC9P31274 260 aa23.29■■□□□ 1.32
CDK5RAP3-206ENST00000578018 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
CDK5RAP3-206ENST00000578018 TIMELESSQ9UNS1 1208 aa23.29■■□□□ 1.32
CDK5RAP3-206ENST00000578018 TXNRD1Q16881 649 aa23.28■■□□□ 1.32
CDK5RAP3-206ENST00000578018 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
CDK5RAP3-206ENST00000578018 FYB1O15117 783 aa23.27■■□□□ 1.32
CDK5RAP3-206ENST00000578018 CDCA8Q53HL2 280 aa23.27■■□□□ 1.32
CDK5RAP3-206ENST00000578018 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
CDK5RAP3-206ENST00000578018 SHANK3Q9BYB0 1731 aa23.27■■□□□ 1.32
CDK5RAP3-206ENST00000578018 AMPHP49418 695 aa23.26■■□□□ 1.31
CDK5RAP3-206ENST00000578018 GGNBP2Q9H3C7 697 aa23.26■■□□□ 1.31
CDK5RAP3-206ENST00000578018 SPON1Q9HCB6 807 aa23.26■■□□□ 1.31
CDK5RAP3-206ENST00000578018 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
CDK5RAP3-206ENST00000578018 MEGF6O75095 1541 aa23.23■■□□□ 1.31
CDK5RAP3-206ENST00000578018 RRS1Q15050 365 aaKnown RBP23.23■■□□□ 1.31
CDK5RAP3-206ENST00000578018 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
CDK5RAP3-206ENST00000578018 PDGFDQ9GZP0 370 aaPredicted RBP23.22■■□□□ 1.31
CDK5RAP3-206ENST00000578018 PCGF6Q9BYE7 350 aa23.21■■□□□ 1.31
CDK5RAP3-206ENST00000578018 STK32BQ9NY57 414 aa23.21■■□□□ 1.31
CDK5RAP3-206ENST00000578018 NSD3Q9BZ95 1437 aa23.2■■□□□ 1.3
CDK5RAP3-206ENST00000578018 SLC15A2Q16348 729 aa23.19■■□□□ 1.3
CDK5RAP3-206ENST00000578018 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
CDK5RAP3-206ENST00000578018 CARD14Q9BXL6 1004 aa23.19■■□□□ 1.3
CDK5RAP3-206ENST00000578018 SMG6Q86US8 1419 aaKnown RBP23.18■■□□□ 1.3
CDK5RAP3-206ENST00000578018 PPP1R1BQ9UD71 204 aaPredicted RBP23.18■■□□□ 1.3
CDK5RAP3-206ENST00000578018 ANKRD26Q9UPS8 1709 aa23.16■■□□□ 1.3
CDK5RAP3-206ENST00000578018 INSRP06213 1382 aa23.16■■□□□ 1.3
CDK5RAP3-206ENST00000578018 FLT4P35916 1363 aa23.16■■□□□ 1.3
CDK5RAP3-206ENST00000578018 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
CDK5RAP3-206ENST00000578018 NBPF6Q5VWK0 638 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms