RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 KIF1CO43896 1103 aaKnown RBP5.21□□□□□ -1.58
CDH8-205ENST00000577730 GTF2E1P29083 439 aaPredicted RBP5.21□□□□□ -1.58
CDH8-205ENST00000577730 CCDC172P0C7W6 258 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 GCKP35557 465 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 SKAP1Q86WV1 359 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 NUTM1Q86Y26 1132 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 NAP1L1P55209 391 aaKnown RBP5.21□□□□□ -1.58
CDH8-205ENST00000577730 FAM177BA6PVY3 158 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 PDCP20941 246 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 RBBP5Q15291 538 aaKnown RBP5.21□□□□□ -1.58
CDH8-205ENST00000577730 MIPOL1Q8TD10 442 aa5.21□□□□□ -1.58
CDH8-205ENST00000577730 RIOK3O14730 519 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 KRT85P78386 507 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 NBPF8Q3BBV2 869 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 MSL1Q68DK7 614 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 CEP112Q8N8E3 955 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 CCDC148Q8NFR7 591 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 ODF2Q5BJF6 829 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 FMNL2Q96PY5 1086 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 UPF3BQ9BZI7 483 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 AKAP17AQ02040 695 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 CLASRPQ8N2M8 674 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 TRMT1Q9NXH9 659 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 VPS18Q9P253 973 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 JRKLQ9Y4A0 524 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 CEP83Q9Y592 693 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 IRX5P78411 483 aaPredicted RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 ZSCAN26Q16670 478 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 C8orf34Q49A92 452 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 DNAJC21Q5F1R6 531 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 GCC1Q96CN9 775 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 TTC12Q9H892 705 aaPredicted RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDH8-205ENST00000577730 MKRN1Q9UHC7 482 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 PLEKHD1A6NEE1 506 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 ARHGAP29Q52LW3 1261 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 CCDC181Q5TID7 509 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 PPFIBP1Q86W92 1011 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 RBM27Q9P2N5 1060 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 ERLIN2O94905 339 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 KIF5BP33176 963 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 FILIP1LQ4L180 1135 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 PNISRQ8TF01 805 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 PPP1R9BQ96SB3 815 aa5.2□□□□□ -1.58
CDH8-205ENST00000577730 RRP7AQ9Y3A4 280 aaKnown RBP5.2□□□□□ -1.58
CDH8-205ENST00000577730 USP47Q96K76 1375 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 CCDC196A0A1B0GTZ2 297 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 OTUD6BQ8N6M0 293 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.19□□□□□ -1.58
CDH8-205ENST00000577730 FOXD1Q16676 465 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 RPUSD2Q8IZ73 545 aaKnown RBP5.19□□□□□ -1.58
CDH8-205ENST00000577730 API5Q9BZZ5 524 aaKnown RBP5.19□□□□□ -1.58
CDH8-205ENST00000577730 CCDC121Q6ZUS5 278 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 CCDC50Q8IVM0 306 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 SEPT6Q14141 434 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 GIGYF2Q6Y7W6 1299 aaKnown RBP5.19□□□□□ -1.58
CDH8-205ENST00000577730 CCDC186Q7Z3E2 898 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 SCLT1Q96NL6 688 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 PANK3Q9H999 370 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 PLEKHH1Q9ULM0 1364 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 INPP5BP32019 993 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 DBN1Q16643 649 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 CCDC184Q52MB2 194 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 KIF5CO60282 957 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 PIP4K2AP48426 406 aaPredicted RBP5.19□□□□□ -1.58
CDH8-205ENST00000577730 ZNF396Q96N95 335 aaPredicted RBP5.19□□□□□ -1.58
CDH8-205ENST00000577730 NCAPGQ9BPX3 1015 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 FBXO3Q9UK99 471 aa5.19□□□□□ -1.58
CDH8-205ENST00000577730 SOX12O15370 315 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 PRIM1P49642 420 aaKnown RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 PKD2Q13563 968 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 MCTP2Q6DN12 878 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 SYNE3Q6ZMZ3 975 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 CCDC150Q8NCX0 1101 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 RAI14Q9P0K7 980 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 EIF5P55010 431 aaKnown RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 BIRC2Q13490 618 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 ZBTB9Q96C00 473 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 SPATA32Q96LK8 384 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 CFAP45Q9UL16 551 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 LOC102724159A0A0B4J2E5 919 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 VGFO15240 615 aaPredicted RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 SATB1Q01826 763 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 PWP2Q15269 919 aaKnown RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 KIF4BQ2VIQ3 1234 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 SPECC1LQ69YQ0 1117 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 GOLGA5Q8TBA6 731 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 NUCKS1Q9H1E3 243 aaKnown RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 VEZTQ9HBM0 779 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 CCDC175P0C221 793 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 MAP2K1Q02750 393 aaPredicted RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 RAB3GAP1Q15042 981 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 ST20-MTHFSA0A0A6YYL1 179 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 CAVIN2O95810 425 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 MYCNP04198 464 aaPredicted RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 CASTP20810 708 aaKnown RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 SPATA24Q86W54 205 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 CCDC47Q96A33 483 aaKnown RBP5.18□□□□□ -1.58
CDH8-205ENST00000577730 CCDC114Q96M63 670 aa5.18□□□□□ -1.58
CDH8-205ENST00000577730 ROCK1Q13464 1354 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms