RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 OVOS2Q6IE36 1432 aa17.51■□□□□ 0.39
CSNK1D-206ENST00000577578 AXIN2Q9Y2T1 843 aa17.51■□□□□ 0.39
CSNK1D-206ENST00000577578 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
CSNK1D-206ENST00000577578 LTN1O94822 1766 aa17.51■□□□□ 0.39
CSNK1D-206ENST00000577578 NME9Q86XW9 330 aa17.5■□□□□ 0.39
CSNK1D-206ENST00000577578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.5■□□□□ 0.39
CSNK1D-206ENST00000577578 USP35Q9P2H5 1018 aa17.5■□□□□ 0.39
CSNK1D-206ENST00000577578 TNS1Q9HBL0 1735 aaKnown RBP17.5■□□□□ 0.39
CSNK1D-206ENST00000577578 WDR17Q8IZU2 1322 aa17.49■□□□□ 0.39
CSNK1D-206ENST00000577578 TMF1P82094 1093 aa17.49■□□□□ 0.39
CSNK1D-206ENST00000577578 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
CSNK1D-206ENST00000577578 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
CSNK1D-206ENST00000577578 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
CSNK1D-206ENST00000577578 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
CSNK1D-206ENST00000577578 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
CSNK1D-206ENST00000577578 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
CSNK1D-206ENST00000577578 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
CSNK1D-206ENST00000577578 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
CSNK1D-206ENST00000577578 MYOM1P52179 1685 aa17.45■□□□□ 0.38
CSNK1D-206ENST00000577578 PEAK1Q9H792 1746 aa17.45■□□□□ 0.38
CSNK1D-206ENST00000577578 SOX12O15370 315 aa17.45■□□□□ 0.38
CSNK1D-206ENST00000577578 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
CSNK1D-206ENST00000577578 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
CSNK1D-206ENST00000577578 TOM1L2Q6ZVM7 507 aa17.44■□□□□ 0.38
CSNK1D-206ENST00000577578 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
CSNK1D-206ENST00000577578 BAG6P46379 1132 aa17.43■□□□□ 0.38
CSNK1D-206ENST00000577578 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
CSNK1D-206ENST00000577578 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-206ENST00000577578 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-206ENST00000577578 ERBB3P21860 1342 aa17.42■□□□□ 0.38
CSNK1D-206ENST00000577578 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
CSNK1D-206ENST00000577578 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
CSNK1D-206ENST00000577578 C11orf95C9JLR9 678 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-206ENST00000577578 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
CSNK1D-206ENST00000577578 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-206ENST00000577578 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
CSNK1D-206ENST00000577578 BCL9O00512 1426 aa17.38■□□□□ 0.37
CSNK1D-206ENST00000577578 TRIM37O94972 964 aa17.38■□□□□ 0.37
CSNK1D-206ENST00000577578 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
CSNK1D-206ENST00000577578 DDB1Q16531 1140 aa17.38■□□□□ 0.37
CSNK1D-206ENST00000577578 COG3Q96JB2 828 aa17.38■□□□□ 0.37
CSNK1D-206ENST00000577578 FYB1O15117 783 aa17.37■□□□□ 0.37
CSNK1D-206ENST00000577578 EN1Q05925 392 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-206ENST00000577578 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
CSNK1D-206ENST00000577578 RREB1Q92766 1687 aa17.36■□□□□ 0.37
CSNK1D-206ENST00000577578 IP6K1Q92551 441 aa17.36■□□□□ 0.37
CSNK1D-206ENST00000577578 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-206ENST00000577578 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
CSNK1D-206ENST00000577578 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
CSNK1D-206ENST00000577578 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
CSNK1D-206ENST00000577578 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
CSNK1D-206ENST00000577578 ANKRD24Q8TF21 1146 aa17.34■□□□□ 0.37
CSNK1D-206ENST00000577578 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
CSNK1D-206ENST00000577578 RTL1A6NKG5 1358 aa17.33■□□□□ 0.36
CSNK1D-206ENST00000577578 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
CSNK1D-206ENST00000577578 APBA3O96018 575 aa17.32■□□□□ 0.36
CSNK1D-206ENST00000577578 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-206ENST00000577578 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
CSNK1D-206ENST00000577578 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
CSNK1D-206ENST00000577578 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
CSNK1D-206ENST00000577578 HOXC9P31274 260 aa17.31■□□□□ 0.36
CSNK1D-206ENST00000577578 EZH2Q15910 746 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-206ENST00000577578 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
CSNK1D-206ENST00000577578 RGPD2P0DJD1 1756 aa17.3■□□□□ 0.36
CSNK1D-206ENST00000577578 EXOC5O00471 708 aa17.3■□□□□ 0.36
CSNK1D-206ENST00000577578 HSPA5P11021 654 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-206ENST00000577578 FBLN1P23142 703 aa17.3■□□□□ 0.36
CSNK1D-206ENST00000577578 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
CSNK1D-206ENST00000577578 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
CSNK1D-206ENST00000577578 IL2RBP14784 551 aa17.29■□□□□ 0.36
CSNK1D-206ENST00000577578 LRP5O75197 1615 aa17.29■□□□□ 0.36
CSNK1D-206ENST00000577578 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-206ENST00000577578 NHSQ6T4R5 1651 aa17.27■□□□□ 0.36
CSNK1D-206ENST00000577578 PLSCR1O15162 318 aa17.27■□□□□ 0.36
CSNK1D-206ENST00000577578 AMPHP49418 695 aa17.27■□□□□ 0.36
CSNK1D-206ENST00000577578 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
CSNK1D-206ENST00000577578 CGNL1Q0VF96 1302 aa17.25■□□□□ 0.35
CSNK1D-206ENST00000577578 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
CSNK1D-206ENST00000577578 INSRP06213 1382 aa17.25■□□□□ 0.35
CSNK1D-206ENST00000577578 SHANK3Q9BYB0 1731 aa17.24■□□□□ 0.35
CSNK1D-206ENST00000577578 MAP2P11137 1827 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-206ENST00000577578 LTV1Q96GA3 475 aaPredicted RBP17.24■□□□□ 0.35
CSNK1D-206ENST00000577578 FLT4P35916 1363 aa17.24■□□□□ 0.35
CSNK1D-206ENST00000577578 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-206ENST00000577578 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-206ENST00000577578 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-206ENST00000577578 HSP90AB2PQ58FF8 381 aa17.21■□□□□ 0.35
CSNK1D-206ENST00000577578 MEGF6O75095 1541 aa17.21■□□□□ 0.34
CSNK1D-206ENST00000577578 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
CSNK1D-206ENST00000577578 BTAF1O14981 1849 aa17.2■□□□□ 0.34
CSNK1D-206ENST00000577578 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
CSNK1D-206ENST00000577578 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
CSNK1D-206ENST00000577578 NCAPD2Q15021 1401 aa17.2■□□□□ 0.34
CSNK1D-206ENST00000577578 KCNQ2O43526 872 aa17.18■□□□□ 0.34
CSNK1D-206ENST00000577578 PROM2Q8N271 834 aa17.18■□□□□ 0.34
CSNK1D-206ENST00000577578 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
CSNK1D-206ENST00000577578 PANK3Q9H999 370 aa17.18■□□□□ 0.34
CSNK1D-206ENST00000577578 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
CSNK1D-206ENST00000577578 NSD2O96028 1365 aa17.17■□□□□ 0.34
CSNK1D-206ENST00000577578 NBPF14Q5TI25 921 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms