RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 AATKQ6ZMQ8 1374 aa17.17■□□□□ 0.34
SNRPN-208ENST00000577565 DDB1Q16531 1140 aa17.17■□□□□ 0.34
SNRPN-208ENST00000577565 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
SNRPN-208ENST00000577565 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
SNRPN-208ENST00000577565 CHD4Q14839 1912 aa17.15■□□□□ 0.34
SNRPN-208ENST00000577565 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
SNRPN-208ENST00000577565 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
SNRPN-208ENST00000577565 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
SNRPN-208ENST00000577565 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
SNRPN-208ENST00000577565 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
SNRPN-208ENST00000577565 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
SNRPN-208ENST00000577565 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
SNRPN-208ENST00000577565 PAPPAQ13219 1627 aa17.13■□□□□ 0.33
SNRPN-208ENST00000577565 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
SNRPN-208ENST00000577565 PIK3C2AO00443 1686 aa17.12■□□□□ 0.33
SNRPN-208ENST00000577565 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
SNRPN-208ENST00000577565 USP6P35125 1406 aa17.12■□□□□ 0.33
SNRPN-208ENST00000577565 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
SNRPN-208ENST00000577565 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
SNRPN-208ENST00000577565 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
SNRPN-208ENST00000577565 NLRP6P59044 892 aa17.09■□□□□ 0.33
SNRPN-208ENST00000577565 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
SNRPN-208ENST00000577565 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
SNRPN-208ENST00000577565 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
SNRPN-208ENST00000577565 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
SNRPN-208ENST00000577565 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
SNRPN-208ENST00000577565 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
SNRPN-208ENST00000577565 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
SNRPN-208ENST00000577565 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
SNRPN-208ENST00000577565 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
SNRPN-208ENST00000577565 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
SNRPN-208ENST00000577565 ARXQ96QS3 562 aa17.06■□□□□ 0.32
SNRPN-208ENST00000577565 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
SNRPN-208ENST00000577565 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
SNRPN-208ENST00000577565 TNS2Q63HR2 1409 aa17.05■□□□□ 0.32
SNRPN-208ENST00000577565 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
SNRPN-208ENST00000577565 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
SNRPN-208ENST00000577565 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
SNRPN-208ENST00000577565 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
SNRPN-208ENST00000577565 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
SNRPN-208ENST00000577565 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
SNRPN-208ENST00000577565 NFAT5O94916 1531 aa17.03■□□□□ 0.32
SNRPN-208ENST00000577565 ABCC6O95255 1503 aa17.01■□□□□ 0.31
SNRPN-208ENST00000577565 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
SNRPN-208ENST00000577565 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
SNRPN-208ENST00000577565 LRRC4BQ9NT99 713 aa17.01■□□□□ 0.31
SNRPN-208ENST00000577565 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
SNRPN-208ENST00000577565 BTAF1O14981 1849 aa17■□□□□ 0.31
SNRPN-208ENST00000577565 EXOC5O00471 708 aa17■□□□□ 0.31
SNRPN-208ENST00000577565 SOX12O15370 315 aa16.99■□□□□ 0.31
SNRPN-208ENST00000577565 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
SNRPN-208ENST00000577565 CSB-PGBD3P0DP91 1061 aa16.99■□□□□ 0.31
SNRPN-208ENST00000577565 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
SNRPN-208ENST00000577565 GPR162Q16538 588 aa16.98■□□□□ 0.31
SNRPN-208ENST00000577565 TTC21BQ7Z4L5 1316 aa16.97■□□□□ 0.31
SNRPN-208ENST00000577565 CEP350Q5VT06 3117 aa16.96■□□□□ 0.31
SNRPN-208ENST00000577565 NLGN2Q8NFZ4 835 aa16.96■□□□□ 0.31
SNRPN-208ENST00000577565 AKT1S1Q96B36 256 aa16.96■□□□□ 0.31
SNRPN-208ENST00000577565 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
SNRPN-208ENST00000577565 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.3
SNRPN-208ENST00000577565 GOLGB1Q14789 3259 aaKnown RBP16.95■□□□□ 0.3
SNRPN-208ENST00000577565 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
SNRPN-208ENST00000577565 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
SNRPN-208ENST00000577565 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
SNRPN-208ENST00000577565 ERBB3P21860 1342 aa16.93■□□□□ 0.3
SNRPN-208ENST00000577565 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRPN-208ENST00000577565 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
SNRPN-208ENST00000577565 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
SNRPN-208ENST00000577565 SLC16A10Q8TF71 515 aa16.9■□□□□ 0.3
SNRPN-208ENST00000577565 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
SNRPN-208ENST00000577565 IL2RBP14784 551 aa16.89■□□□□ 0.29
SNRPN-208ENST00000577565 KCNQ4P56696 695 aa16.89■□□□□ 0.29
SNRPN-208ENST00000577565 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
SNRPN-208ENST00000577565 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
SNRPN-208ENST00000577565 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
SNRPN-208ENST00000577565 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
SNRPN-208ENST00000577565 POLD1P28340 1107 aa16.87■□□□□ 0.29
SNRPN-208ENST00000577565 LTN1O94822 1766 aa16.87■□□□□ 0.29
SNRPN-208ENST00000577565 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
SNRPN-208ENST00000577565 USP31Q70CQ4 1352 aa16.86■□□□□ 0.29
SNRPN-208ENST00000577565 LY75O60449 1722 aa16.85■□□□□ 0.29
SNRPN-208ENST00000577565 SLC27A3Q5K4L6 730 aa16.85■□□□□ 0.29
SNRPN-208ENST00000577565 NSD2O96028 1365 aa16.85■□□□□ 0.29
SNRPN-208ENST00000577565 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
SNRPN-208ENST00000577565 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
SNRPN-208ENST00000577565 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
SNRPN-208ENST00000577565 NME9Q86XW9 330 aa16.83■□□□□ 0.28
SNRPN-208ENST00000577565 DOT1LQ8TEK3 1739 aa16.83■□□□□ 0.28
SNRPN-208ENST00000577565 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
SNRPN-208ENST00000577565 TFCP2L1Q9NZI6 479 aa16.83■□□□□ 0.28
SNRPN-208ENST00000577565 ADCY9O60503 1353 aa16.82■□□□□ 0.28
SNRPN-208ENST00000577565 SBNO2Q9Y2G9 1366 aa16.82■□□□□ 0.28
SNRPN-208ENST00000577565 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
SNRPN-208ENST00000577565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNRPN-208ENST00000577565 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
SNRPN-208ENST00000577565 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
SNRPN-208ENST00000577565 ANKRD36BQ8N2N9 1353 aa16.79■□□□□ 0.28
SNRPN-208ENST00000577565 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
SNRPN-208ENST00000577565 FAM208AQ9UK61 1670 aaKnown RBP16.78■□□□□ 0.28
SNRPN-208ENST00000577565 HSPA6P17066 643 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms