RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 CBLBQ13191 982 aa8.04□□□□□ -1.12
TOP2A-202ENST00000577541 GAS6Q14393 721 aa8.04□□□□□ -1.12
TOP2A-202ENST00000577541 BAG6P46379 1132 aa8.03□□□□□ -1.12
TOP2A-202ENST00000577541 CCDC116Q8IYX3 515 aa8.03□□□□□ -1.12
TOP2A-202ENST00000577541 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
TOP2A-202ENST00000577541 VASH1Q7L8A9 365 aaPredicted RBP8.02□□□□□ -1.13
TOP2A-202ENST00000577541 CCDC102AQ96A19 550 aa8.02□□□□□ -1.13
TOP2A-202ENST00000577541 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
TOP2A-202ENST00000577541 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
TOP2A-202ENST00000577541 CFAP99D6REC4 459 aa8.01□□□□□ -1.13
TOP2A-202ENST00000577541 Q6ZVU0 165 aa8.01□□□□□ -1.13
TOP2A-202ENST00000577541 C1QTNF2Q9BXJ5 285 aa8.01□□□□□ -1.13
TOP2A-202ENST00000577541 FURINP09958 794 aa8□□□□□ -1.13
TOP2A-202ENST00000577541 CTSOP43234 321 aaPredicted RBP8□□□□□ -1.13
TOP2A-202ENST00000577541 KRI1Q8N9T8 703 aaKnown RBP8□□□□□ -1.13
TOP2A-202ENST00000577541 NEDD1Q8NHV4 660 aa8□□□□□ -1.13
TOP2A-202ENST00000577541 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
TOP2A-202ENST00000577541 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
TOP2A-202ENST00000577541 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
TOP2A-202ENST00000577541 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
TOP2A-202ENST00000577541 BCRP11274 1271 aa7.97□□□□□ -1.13
TOP2A-202ENST00000577541 PPP1R26Q5T8A7 1209 aaPredicted RBP7.97□□□□□ -1.13
TOP2A-202ENST00000577541 LCE3BQ5TA77 95 aa7.97□□□□□ -1.13
TOP2A-202ENST00000577541 TRMT44Q8IYL2 757 aaKnown RBP7.97□□□□□ -1.13
TOP2A-202ENST00000577541 SSTR3P32745 418 aaPredicted RBP7.96□□□□□ -1.14
TOP2A-202ENST00000577541 AGBL1Q96MI9 1066 aa7.96□□□□□ -1.14
TOP2A-202ENST00000577541 MBIPQ9NS73 344 aa7.96□□□□□ -1.14
TOP2A-202ENST00000577541 INSM2Q96T92 566 aaPredicted RBP7.95□□□□□ -1.14
TOP2A-202ENST00000577541 KRBA1A5PL33 1030 aa7.94□□□□□ -1.14
TOP2A-202ENST00000577541 ARMC2Q8NEN0 867 aa7.94□□□□□ -1.14
TOP2A-202ENST00000577541 POLMQ9NP87 494 aaPredicted RBP7.94□□□□□ -1.14
TOP2A-202ENST00000577541 IGF1RP08069 1367 aa7.94□□□□□ -1.14
TOP2A-202ENST00000577541 RNF217Q8TC41 542 aa7.93□□□□□ -1.14
TOP2A-202ENST00000577541 SH3BP5LQ7L8J4 393 aa7.92□□□□□ -1.14
TOP2A-202ENST00000577541 KRTAP4-12Q9BQ66 201 aa7.92□□□□□ -1.14
TOP2A-202ENST00000577541 MAGEB6P1A0A0J9YX57 407 aa7.91□□□□□ -1.14
TOP2A-202ENST00000577541 HRCP23327 699 aa7.91□□□□□ -1.14
TOP2A-202ENST00000577541 GJA5P36382 358 aa7.91□□□□□ -1.14
TOP2A-202ENST00000577541 RELBQ01201 579 aa7.91□□□□□ -1.14
TOP2A-202ENST00000577541 ACDQ96AP0 544 aa7.91□□□□□ -1.14
TOP2A-202ENST00000577541 LRRC4BQ9NT99 713 aa7.91□□□□□ -1.14
TOP2A-202ENST00000577541 ITGB7P26010 798 aa7.9□□□□□ -1.14
TOP2A-202ENST00000577541 NBPF14Q5TI25 921 aa7.9□□□□□ -1.14
TOP2A-202ENST00000577541 FOXR1Q6PIV2 292 aa7.9□□□□□ -1.14
TOP2A-202ENST00000577541 ALYREFQ86V81 257 aaKnown RBP7.9□□□□□ -1.14
TOP2A-202ENST00000577541 GPR25O00155 361 aa7.89□□□□□ -1.15
TOP2A-202ENST00000577541 RSBN1LQ6PCB5 846 aaPredicted RBP7.89□□□□□ -1.15
TOP2A-202ENST00000577541 GMCL1Q96IK5 515 aa7.89□□□□□ -1.15
TOP2A-202ENST00000577541 ZNF395Q9H8N7 513 aaPredicted RBP7.89□□□□□ -1.15
TOP2A-202ENST00000577541 CABLES1Q8TDN4 633 aa7.88□□□□□ -1.15
TOP2A-202ENST00000577541 SNRPNP63162 240 aaKnown RBP7.87□□□□□ -1.15
TOP2A-202ENST00000577541 DHX9Q08211 1270 aaKnown RBP7.87□□□□□ -1.15
TOP2A-202ENST00000577541 ERFEQ4G0M1 354 aa7.87□□□□□ -1.15
TOP2A-202ENST00000577541 FOXD4L5Q5VV16 416 aaPredicted RBP7.87□□□□□ -1.15
TOP2A-202ENST00000577541 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
TOP2A-202ENST00000577541 ZBTB3Q9H5J0 574 aa7.87□□□□□ -1.15
TOP2A-202ENST00000577541 RTN4Q9NQC3 1192 aaKnown RBP7.87□□□□□ -1.15
TOP2A-202ENST00000577541 TRIM22Q8IYM9 498 aa7.86□□□□□ -1.15
TOP2A-202ENST00000577541 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
TOP2A-202ENST00000577541 KRTAP9-9Q9BYP9 154 aa7.86□□□□□ -1.15
TOP2A-202ENST00000577541 KRTAP9-4Q9BYQ2 154 aa7.86□□□□□ -1.15
TOP2A-202ENST00000577541 OIP5O43482 229 aa7.85□□□□□ -1.15
TOP2A-202ENST00000577541 COL8A1P27658 744 aa7.85□□□□□ -1.15
TOP2A-202ENST00000577541 LYSMD3Q7Z3D4 306 aa7.85□□□□□ -1.15
TOP2A-202ENST00000577541 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
TOP2A-202ENST00000577541 TBC1D2Q9BYX2 928 aa7.85□□□□□ -1.15
TOP2A-202ENST00000577541 BTBD11A6QL63 1104 aa7.84□□□□□ -1.15
TOP2A-202ENST00000577541 KCTD15Q96SI1 283 aaPredicted RBP7.84□□□□□ -1.15
TOP2A-202ENST00000577541 MKL2Q9ULH7 1088 aa7.84□□□□□ -1.15
TOP2A-202ENST00000577541 DBN1Q16643 649 aa7.83□□□□□ -1.16
TOP2A-202ENST00000577541 PRPF38BQ5VTL8 546 aaKnown RBP7.83□□□□□ -1.16
TOP2A-202ENST00000577541 BEGAINQ9BUH8 593 aa7.83□□□□□ -1.16
TOP2A-202ENST00000577541 NSFL1CQ9UNZ2 370 aaKnown RBP7.83□□□□□ -1.16
TOP2A-202ENST00000577541 DIXDC1Q155Q3 683 aa7.82□□□□□ -1.16
TOP2A-202ENST00000577541 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
TOP2A-202ENST00000577541 TSC1Q92574 1164 aa7.81□□□□□ -1.16
TOP2A-202ENST00000577541 GPKOWQ92917 476 aaPredicted RBP eCLIP7.81□□□□□ -1.16
TOP2A-202ENST00000577541 MX2P20592 715 aa7.8□□□□□ -1.16
TOP2A-202ENST00000577541 INTS6LQ5JSJ4 861 aaKnown RBP7.8□□□□□ -1.16
TOP2A-202ENST00000577541 ZMYM1Q5SVZ6 1142 aa7.8□□□□□ -1.16
TOP2A-202ENST00000577541 RIPOR1Q6ZS17 1223 aa7.8□□□□□ -1.16
TOP2A-202ENST00000577541 TRERF1Q96PN7 1200 aa7.8□□□□□ -1.16
TOP2A-202ENST00000577541 TMPRSS4Q9NRS4 437 aa7.8□□□□□ -1.16
TOP2A-202ENST00000577541 RHOQP17081 205 aa7.79□□□□□ -1.16
TOP2A-202ENST00000577541 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
TOP2A-202ENST00000577541 CSPP1Q1MSJ5 1256 aa7.79□□□□□ -1.16
TOP2A-202ENST00000577541 GIGYF2Q6Y7W6 1299 aaKnown RBP7.79□□□□□ -1.16
TOP2A-202ENST00000577541 PRICKLE2Q7Z3G6 844 aa7.79□□□□□ -1.16
TOP2A-202ENST00000577541 GTPBP3Q969Y2 492 aaKnown RBP7.79□□□□□ -1.16
TOP2A-202ENST00000577541 SLC10A4Q96EP9 437 aa7.79□□□□□ -1.16
TOP2A-202ENST00000577541 SEMA6BQ9H3T3 888 aa7.79□□□□□ -1.16
TOP2A-202ENST00000577541 C1QTNF9BB2RNN3 333 aa7.78□□□□□ -1.16
TOP2A-202ENST00000577541 SHISA8B8ZZ34 492 aa7.78□□□□□ -1.16
TOP2A-202ENST00000577541 H7C1W4 665 aa7.78□□□□□ -1.16
TOP2A-202ENST00000577541 ADH1AP07327 375 aa7.78□□□□□ -1.16
TOP2A-202ENST00000577541 PTGIRP43119 386 aa7.78□□□□□ -1.16
TOP2A-202ENST00000577541 TTLL12Q14166 644 aaPredicted RBP7.78□□□□□ -1.16
TOP2A-202ENST00000577541 AMER1Q5JTC6 1135 aaPredicted RBP7.78□□□□□ -1.16
TOP2A-202ENST00000577541 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
TOP2A-202ENST00000577541 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms