RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
CUEDC1-203ENST00000577422 SBF2Q86WG5 1849 aa19.43■□□□□ 0.7
CUEDC1-203ENST00000577422 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
CUEDC1-203ENST00000577422 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
CUEDC1-203ENST00000577422 ZBTB7CA1YPR0 619 aa19.42■□□□□ 0.7
CUEDC1-203ENST00000577422 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
CUEDC1-203ENST00000577422 OVOS2A0A0J9YW53 1432 aa19.42■□□□□ 0.7
CUEDC1-203ENST00000577422 OVOS2Q6IE36 1432 aa19.42■□□□□ 0.7
CUEDC1-203ENST00000577422 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
CUEDC1-203ENST00000577422 RGPD3A6NKT7 1758 aaPredicted RBP19.39■□□□□ 0.7
CUEDC1-203ENST00000577422 RGPD4Q7Z3J3 1758 aa19.39■□□□□ 0.7
CUEDC1-203ENST00000577422 TOM1L2Q6ZVM7 507 aa19.39■□□□□ 0.69
CUEDC1-203ENST00000577422 PTF1AQ7RTS3 328 aa19.39■□□□□ 0.69
CUEDC1-203ENST00000577422 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
CUEDC1-203ENST00000577422 USP31Q70CQ4 1352 aa19.39■□□□□ 0.69
CUEDC1-203ENST00000577422 ABCC6O95255 1503 aa19.39■□□□□ 0.69
CUEDC1-203ENST00000577422 BCL9O00512 1426 aa19.38■□□□□ 0.69
CUEDC1-203ENST00000577422 DDB1Q16531 1140 aa19.37■□□□□ 0.69
CUEDC1-203ENST00000577422 MARCH10Q8NA82 808 aaPredicted RBP19.37■□□□□ 0.69
CUEDC1-203ENST00000577422 SOX12O15370 315 aa19.36■□□□□ 0.69
CUEDC1-203ENST00000577422 CARD10Q9BWT7 1032 aa19.36■□□□□ 0.69
CUEDC1-203ENST00000577422 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
CUEDC1-203ENST00000577422 C11orf95C9JLR9 678 aaPredicted RBP19.35■□□□□ 0.69
CUEDC1-203ENST00000577422 PLSCR1O15162 318 aa19.34■□□□□ 0.69
CUEDC1-203ENST00000577422 NME9Q86XW9 330 aa19.33■□□□□ 0.68
CUEDC1-203ENST00000577422 SLC12A5Q9H2X9 1139 aa19.33■□□□□ 0.68
CUEDC1-203ENST00000577422 LTN1O94822 1766 aa19.32■□□□□ 0.68
CUEDC1-203ENST00000577422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
CUEDC1-203ENST00000577422 PROM2Q8N271 834 aa19.32■□□□□ 0.68
CUEDC1-203ENST00000577422 CDCA7Q9BWT1 371 aaPredicted RBP19.32■□□□□ 0.68
CUEDC1-203ENST00000577422 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
CUEDC1-203ENST00000577422 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
CUEDC1-203ENST00000577422 ERBB3P21860 1342 aa19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 TESK2Q96S53 571 aa19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 TNS2Q63HR2 1409 aa19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 EDC4Q6P2E9 1401 aaKnown RBP19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 CCDC7Q96M83 1385 aa19.3■□□□□ 0.68
CUEDC1-203ENST00000577422 CASZ1Q86V15 1759 aa19.29■□□□□ 0.68
CUEDC1-203ENST00000577422 PUS7Q96PZ0 661 aaKnown RBP19.29■□□□□ 0.68
CUEDC1-203ENST00000577422 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
CUEDC1-203ENST00000577422 NBPF14Q5TI25 921 aa19.28■□□□□ 0.68
CUEDC1-203ENST00000577422 TMC1Q8TDI8 760 aa19.27■□□□□ 0.68
CUEDC1-203ENST00000577422 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
CUEDC1-203ENST00000577422 UTRNP46939 3433 aa19.24■□□□□ 0.67
CUEDC1-203ENST00000577422 EXOC5O00471 708 aa19.24■□□□□ 0.67
CUEDC1-203ENST00000577422 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
CUEDC1-203ENST00000577422 PDGFDQ9GZP0 370 aaPredicted RBP19.24■□□□□ 0.67
CUEDC1-203ENST00000577422 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
CUEDC1-203ENST00000577422 KCNQ2O43526 872 aa19.23■□□□□ 0.67
CUEDC1-203ENST00000577422 ANKRD24Q8TF21 1146 aa19.22■□□□□ 0.67
CUEDC1-203ENST00000577422 TERF2IPQ9NYB0 399 aa19.22■□□□□ 0.67
CUEDC1-203ENST00000577422 NINLQ9Y2I6 1382 aa19.2■□□□□ 0.66
CUEDC1-203ENST00000577422 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
CUEDC1-203ENST00000577422 SPON1Q9HCB6 807 aa19.2■□□□□ 0.66
CUEDC1-203ENST00000577422 NLRP2Q9NX02 1062 aa19.2■□□□□ 0.66
CUEDC1-203ENST00000577422 PAPPAQ13219 1627 aa19.2■□□□□ 0.66
CUEDC1-203ENST00000577422 IL2RBP14784 551 aa19.19■□□□□ 0.66
CUEDC1-203ENST00000577422 IP6K1Q92551 441 aa19.18■□□□□ 0.66
CUEDC1-203ENST00000577422 FAM208AQ9UK61 1670 aaKnown RBP19.17■□□□□ 0.66
CUEDC1-203ENST00000577422 FBLN1P23142 703 aa19.17■□□□□ 0.66
CUEDC1-203ENST00000577422 BTAF1O14981 1849 aa19.16■□□□□ 0.66
CUEDC1-203ENST00000577422 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
CUEDC1-203ENST00000577422 PTGER2P43116 358 aa19.15■□□□□ 0.66
CUEDC1-203ENST00000577422 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
CUEDC1-203ENST00000577422 MAP3K19Q56UN5 1328 aa19.15■□□□□ 0.66
CUEDC1-203ENST00000577422 ANKRD36BQ8N2N9 1353 aa19.15■□□□□ 0.66
CUEDC1-203ENST00000577422 MYOM1P52179 1685 aa19.14■□□□□ 0.66
CUEDC1-203ENST00000577422 SHANK3Q9BYB0 1731 aa19.14■□□□□ 0.66
CUEDC1-203ENST00000577422 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.65
CUEDC1-203ENST00000577422 HOXC9P31274 260 aa19.13■□□□□ 0.65
CUEDC1-203ENST00000577422 ZBTB7AO95365 584 aa19.12■□□□□ 0.65
CUEDC1-203ENST00000577422 USP47Q96K76 1375 aa19.11■□□□□ 0.65
CUEDC1-203ENST00000577422 COG3Q96JB2 828 aa19.11■□□□□ 0.65
CUEDC1-203ENST00000577422 SGIP1Q9BQI5 828 aa19.11■□□□□ 0.65
CUEDC1-203ENST00000577422 FYB1O15117 783 aa19.1■□□□□ 0.65
CUEDC1-203ENST00000577422 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
CUEDC1-203ENST00000577422 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
CUEDC1-203ENST00000577422 STK32BQ9NY57 414 aa19.1■□□□□ 0.65
CUEDC1-203ENST00000577422 PPP1R1BQ9UD71 204 aaPredicted RBP19.1■□□□□ 0.65
CUEDC1-203ENST00000577422 MEGF6O75095 1541 aa19.1■□□□□ 0.65
CUEDC1-203ENST00000577422 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
CUEDC1-203ENST00000577422 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
CUEDC1-203ENST00000577422 GOLGB1Q14789 3259 aaKnown RBP19.08■□□□□ 0.65
CUEDC1-203ENST00000577422 ZNF827Q17R98 1081 aa19.08■□□□□ 0.64
CUEDC1-203ENST00000577422 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
CUEDC1-203ENST00000577422 NSD2O96028 1365 aa19.07■□□□□ 0.64
CUEDC1-203ENST00000577422 ATF5Q9Y2D1 282 aaPredicted RBP19.07■□□□□ 0.64
CUEDC1-203ENST00000577422 DOT1LQ8TEK3 1739 aa19.06■□□□□ 0.64
CUEDC1-203ENST00000577422 TMF1P82094 1093 aa19.06■□□□□ 0.64
CUEDC1-203ENST00000577422 RRS1Q15050 365 aaKnown RBP19.06■□□□□ 0.64
CUEDC1-203ENST00000577422 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
CUEDC1-203ENST00000577422 NBPF6Q5VWK0 638 aa19.05■□□□□ 0.64
CUEDC1-203ENST00000577422 DDX54Q8TDD1 881 aaKnown RBP19.05■□□□□ 0.64
CUEDC1-203ENST00000577422 NBPF4Q96M43 638 aa19.05■□□□□ 0.64
CUEDC1-203ENST00000577422 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
CUEDC1-203ENST00000577422 LY75O60449 1722 aa19.04■□□□□ 0.64
CUEDC1-203ENST00000577422 AMPHP49418 695 aa19.04■□□□□ 0.64
CUEDC1-203ENST00000577422 QSER1Q2KHR3 1735 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms