RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 OVOS2Q6IE36 1432 aa36.73■■■■□ 3.47
PPP4R1-204ENST00000577393 EP400Q96L91 3159 aa36.72■■■■□ 3.47
PPP4R1-204ENST00000577393 TCP11L2Q8N4U5 519 aa36.69■■■■□ 3.46
PPP4R1-204ENST00000577393 MYOM1P52179 1685 aa36.68■■■■□ 3.46
PPP4R1-204ENST00000577393 THSD7AQ9UPZ6 1657 aa36.68■■■■□ 3.46
PPP4R1-204ENST00000577393 BARGINQ6ZT62 677 aa36.68■■■■□ 3.46
PPP4R1-204ENST00000577393 COG3Q96JB2 828 aa36.68■■■■□ 3.46
PPP4R1-204ENST00000577393 POLR3GLQ9BT43 218 aa36.68■■■■□ 3.46
PPP4R1-204ENST00000577393 CRB1P82279 1406 aa36.67■■■■□ 3.46
PPP4R1-204ENST00000577393 THRAP3Q9Y2W1 955 aaKnown RBP36.65■■■■□ 3.46
PPP4R1-204ENST00000577393 FYB1O15117 783 aa36.64■■■■□ 3.46
PPP4R1-204ENST00000577393 CARD14Q9BXL6 1004 aa36.64■■■■□ 3.46
PPP4R1-204ENST00000577393 RGPD5Q99666 1765 aa36.63■■■■□ 3.46
PPP4R1-204ENST00000577393 WDR17Q8IZU2 1322 aa36.63■■■■□ 3.45
PPP4R1-204ENST00000577393 TOM1L2Q6ZVM7 507 aa36.63■■■■□ 3.45
PPP4R1-204ENST00000577393 ABCC6O95255 1503 aa36.62■■■■□ 3.45
PPP4R1-204ENST00000577393 GGNBP2Q9H3C7 697 aa36.61■■■■□ 3.45
PPP4R1-204ENST00000577393 CCDC125Q86Z20 511 aa36.6■■■■□ 3.45
PPP4R1-204ENST00000577393 LTN1O94822 1766 aa36.59■■■■□ 3.45
PPP4R1-204ENST00000577393 CSB-PGBD3P0DP91 1061 aa36.59■■■■□ 3.45
PPP4R1-204ENST00000577393 FAM182BQ5T319 152 aa36.57■■■■□ 3.44
PPP4R1-204ENST00000577393 NSD3Q9BZ95 1437 aa36.57■■■■□ 3.44
PPP4R1-204ENST00000577393 C11orf95C9JLR9 678 aaPredicted RBP36.55■■■■□ 3.44
PPP4R1-204ENST00000577393 FBLN1P23142 703 aa36.55■■■■□ 3.44
PPP4R1-204ENST00000577393 BLMP54132 1417 aaPredicted RBP36.53■■■■□ 3.44
PPP4R1-204ENST00000577393 CARD10Q9BWT7 1032 aa36.53■■■■□ 3.44
PPP4R1-204ENST00000577393 IP6K1Q92551 441 aa36.51■■■■□ 3.44
PPP4R1-204ENST00000577393 ERBB3P21860 1342 aa36.51■■■■□ 3.43
PPP4R1-204ENST00000577393 MAP3K19Q56UN5 1328 aa36.51■■■■□ 3.43
PPP4R1-204ENST00000577393 KIF20BQ96Q89 1820 aa36.5■■■■□ 3.43
PPP4R1-204ENST00000577393 PDE3BQ13370 1112 aa36.5■■■■□ 3.43
PPP4R1-204ENST00000577393 ANKRD24Q8TF21 1146 aa36.48■■■■□ 3.43
PPP4R1-204ENST00000577393 PARP4Q9UKK3 1724 aaKnown RBP36.45■■■■□ 3.43
PPP4R1-204ENST00000577393 AMPHP49418 695 aa36.45■■■■□ 3.43
PPP4R1-204ENST00000577393 SF3B2Q13435 895 aaKnown RBP36.45■■■■□ 3.43
PPP4R1-204ENST00000577393 PANK3Q9H999 370 aa36.45■■■■□ 3.43
PPP4R1-204ENST00000577393 NLRP2Q9NX02 1062 aa36.45■■■■□ 3.43
PPP4R1-204ENST00000577393 CCDC7Q96M83 1385 aa36.44■■■■□ 3.42
PPP4R1-204ENST00000577393 CGNL1Q0VF96 1302 aa36.44■■■■□ 3.42
PPP4R1-204ENST00000577393 RRS1Q15050 365 aaKnown RBP36.44■■■■□ 3.42
PPP4R1-204ENST00000577393 HOXC9P31274 260 aa36.43■■■■□ 3.42
PPP4R1-204ENST00000577393 FAM196AQ6ZSG2 479 aa36.43■■■■□ 3.42
PPP4R1-204ENST00000577393 CDCA7Q9BWT1 371 aaPredicted RBP36.43■■■■□ 3.42
PPP4R1-204ENST00000577393 DDB1Q16531 1140 aa36.4■■■■□ 3.42
PPP4R1-204ENST00000577393 DEFB132Q7Z7B7 95 aa36.4■■■■□ 3.42
PPP4R1-204ENST00000577393 LTV1Q96GA3 475 aaPredicted RBP36.4■■■■□ 3.42
PPP4R1-204ENST00000577393 WNK3Q9BYP7 1800 aa36.39■■■■□ 3.42
PPP4R1-204ENST00000577393 DISP2A7MBM2 1401 aa36.39■■■■□ 3.42
PPP4R1-204ENST00000577393 KIF7Q2M1P5 1343 aa36.38■■■■□ 3.41
PPP4R1-204ENST00000577393 RTL1A6NKG5 1358 aa36.37■■■■□ 3.41
PPP4R1-204ENST00000577393 LRRC37A3O60309 1634 aa36.37■■■■□ 3.41
PPP4R1-204ENST00000577393 TRIM37O94972 964 aa36.33■■■■□ 3.41
PPP4R1-204ENST00000577393 RGPD1P0DJD0 1748 aa36.31■■■■□ 3.4
PPP4R1-204ENST00000577393 BAG6P46379 1132 aa36.31■■■■□ 3.4
PPP4R1-204ENST00000577393 EXOC5O00471 708 aa36.3■■■■□ 3.4
PPP4R1-204ENST00000577393 IL2RBP14784 551 aa36.29■■■■□ 3.4
PPP4R1-204ENST00000577393 MARCH10Q8NA82 808 aaPredicted RBP36.28■■■■□ 3.4
PPP4R1-204ENST00000577393 EMILIN1Q9Y6C2 1016 aa36.28■■■■□ 3.4
PPP4R1-204ENST00000577393 KIF24Q5T7B8 1368 aa36.27■■■■□ 3.4
PPP4R1-204ENST00000577393 OVOS2A0A0G2JMS6 1433 aa36.27■■■■□ 3.4
PPP4R1-204ENST00000577393 FAM208AQ9UK61 1670 aaKnown RBP36.27■■■■□ 3.4
PPP4R1-204ENST00000577393 HSP90AB2PQ58FF8 381 aa36.27■■■■□ 3.4
PPP4R1-204ENST00000577393 PEAK1Q9H792 1746 aa36.27■■■■□ 3.4
PPP4R1-204ENST00000577393 FLT4P35916 1363 aa36.27■■■■□ 3.4
PPP4R1-204ENST00000577393 INSRP06213 1382 aa36.25■■■■□ 3.39
PPP4R1-204ENST00000577393 TNS1Q9HBL0 1735 aaKnown RBP36.25■■■■□ 3.39
PPP4R1-204ENST00000577393 EN1Q05925 392 aaPredicted RBP36.24■■■■□ 3.39
PPP4R1-204ENST00000577393 KNSTRNQ9Y448 316 aa36.23■■■■□ 3.39
PPP4R1-204ENST00000577393 TNS2Q63HR2 1409 aa36.23■■■■□ 3.39
PPP4R1-204ENST00000577393 ANKRD26Q9UPS8 1709 aa36.22■■■■□ 3.39
PPP4R1-204ENST00000577393 PPM1GO15355 546 aaPredicted RBP36.22■■■■□ 3.39
PPP4R1-204ENST00000577393 NSD2O96028 1365 aa36.21■■■■□ 3.39
PPP4R1-204ENST00000577393 TNNT2P45379 298 aaPredicted RBP36.21■■■■□ 3.39
PPP4R1-204ENST00000577393 RGPD2P0DJD1 1756 aa36.2■■■■□ 3.39
PPP4R1-204ENST00000577393 SMG6Q86US8 1419 aaKnown RBP36.2■■■■□ 3.39
PPP4R1-204ENST00000577393 APBA3O96018 575 aa36.2■■■■□ 3.39
PPP4R1-204ENST00000577393 NBPF6Q5VWK0 638 aa36.2■■■■□ 3.39
PPP4R1-204ENST00000577393 NBPF4Q96M43 638 aa36.2■■■■□ 3.39
PPP4R1-204ENST00000577393 POLKQ9UBT6 870 aa36.2■■■■□ 3.39
PPP4R1-204ENST00000577393 MAP2P11137 1827 aaKnown RBP36.19■■■■□ 3.38
PPP4R1-204ENST00000577393 WASHC2AQ641Q2 1341 aa36.18■■■■□ 3.38
PPP4R1-204ENST00000577393 BCL9O00512 1426 aa36.17■■■■□ 3.38
PPP4R1-204ENST00000577393 USHBP1Q8N6Y0 703 aa36.15■■■■□ 3.38
PPP4R1-204ENST00000577393 MORC1Q86VD1 984 aa36.14■■■■□ 3.38
PPP4R1-204ENST00000577393 SBF2Q86WG5 1849 aa36.13■■■■□ 3.37
PPP4R1-204ENST00000577393 EZH2Q15910 746 aaKnown RBP36.13■■■■□ 3.37
PPP4R1-204ENST00000577393 AMER1Q5JTC6 1135 aaPredicted RBP36.13■■■■□ 3.37
PPP4R1-204ENST00000577393 CAMKK2Q96RR4 588 aa36.13■■■■□ 3.37
PPP4R1-204ENST00000577393 PER1O15534 1290 aaPredicted RBP36.1■■■■□ 3.37
PPP4R1-204ENST00000577393 PTF1AQ7RTS3 328 aa36.1■■■■□ 3.37
PPP4R1-204ENST00000577393 BCL11BQ9C0K0 894 aaPredicted RBP36.1■■■■□ 3.37
PPP4R1-204ENST00000577393 MEGF6O75095 1541 aa36.08■■■■□ 3.37
PPP4R1-204ENST00000577393 DDX54Q8TDD1 881 aaKnown RBP36.06■■■■□ 3.36
PPP4R1-204ENST00000577393 PARD3Q8TEW0 1356 aa36.05■■■■□ 3.36
PPP4R1-204ENST00000577393 ZCRB1Q8TBF4 217 aaKnown RBP36.05■■■■□ 3.36
PPP4R1-204ENST00000577393 RAPGEF4Q8WZA2 1011 aa36.05■■■■□ 3.36
PPP4R1-204ENST00000577393 ACSBG1Q96GR2 724 aa36.02■■■■□ 3.36
PPP4R1-204ENST00000577393 KCNQ2O43526 872 aa36.01■■■■□ 3.36
PPP4R1-204ENST00000577393 TATP17735 454 aaPredicted RBP36.01■■■■□ 3.36
PPP4R1-204ENST00000577393 EYA1Q99502 592 aa36.01■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms