RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	COL14A1	Q05707	1796 aa	Known RBP	13.44	□□□□□ -0.26
SPOP-222	ENST00000577134	SMG6	Q86US8	1419 aa	Known RBP	13.43	□□□□□ -0.26
SPOP-222	ENST00000577134	IP6K1	Q92551	441 aa		13.43	□□□□□ -0.26
SPOP-222	ENST00000577134	PLCH1	Q4KWH8	1693 aa		13.43	□□□□□ -0.26
SPOP-222	ENST00000577134	LMO7	Q8WWI1	1683 aa		13.43	□□□□□ -0.26
SPOP-222	ENST00000577134	HSP90AB2P	Q58FF8	381 aa		13.42	□□□□□ -0.26
SPOP-222	ENST00000577134	RTL1	A6NKG5	1358 aa		13.42	□□□□□ -0.26
SPOP-222	ENST00000577134	FLT4	P35916	1363 aa		13.42	□□□□□ -0.26
SPOP-222	ENST00000577134	CAMTA1	Q9Y6Y1	1673 aa		13.41	□□□□□ -0.26
SPOP-222	ENST00000577134	MIER1	Q8N108	512 aa		13.41	□□□□□ -0.26
SPOP-222	ENST00000577134	LTV1	Q96GA3	475 aa	Predicted RBP	13.41	□□□□□ -0.26
SPOP-222	ENST00000577134	NGLY1	Q96IV0	654 aa		13.41	□□□□□ -0.26
SPOP-222	ENST00000577134	BTG4	Q9NY30	223 aa		13.41	□□□□□ -0.26
SPOP-222	ENST00000577134	KIF24	Q5T7B8	1368 aa		13.41	□□□□□ -0.26
SPOP-222	ENST00000577134	ABCC6	O95255	1503 aa		13.4	□□□□□ -0.26
SPOP-222	ENST00000577134	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.4	□□□□□ -0.26
SPOP-222	ENST00000577134	SLIT2	O94813	1529 aa		13.39	□□□□□ -0.27
SPOP-222	ENST00000577134	CCDC184	Q52MB2	194 aa		13.39	□□□□□ -0.27
SPOP-222	ENST00000577134	INSR	P06213	1382 aa		13.39	□□□□□ -0.27
SPOP-222	ENST00000577134	NWD2	Q9ULI1	1742 aa		13.39	□□□□□ -0.27
SPOP-222	ENST00000577134	BLM	P54132	1417 aa	Predicted RBP	13.39	□□□□□ -0.27
SPOP-222	ENST00000577134	COL5A2	P05997	1499 aa	Predicted RBP	13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	EVA1C	P58658	441 aa		13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	ANKRD24	Q8TF21	1146 aa		13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	CFAP53	Q96M91	514 aa		13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	STRN4	Q9NRL3	753 aa		13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	NRAP	Q86VF7	1730 aa		13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	AFF2	P51816	1311 aa		13.38	□□□□□ -0.27
SPOP-222	ENST00000577134	RGPD2	P0DJD1	1756 aa		13.37	□□□□□ -0.27
SPOP-222	ENST00000577134	COL3A1	P02461	1466 aa	Predicted RBP	13.37	□□□□□ -0.27
SPOP-222	ENST00000577134	CSB-PGBD3	P0DP91	1061 aa		13.37	□□□□□ -0.27
SPOP-222	ENST00000577134	EIF4A2	Q14240	407 aa	Known RBP	13.37	□□□□□ -0.27
SPOP-222	ENST00000577134	ERBB3	P21860	1342 aa		13.37	□□□□□ -0.27
SPOP-222	ENST00000577134	BCL9L	Q86UU0	1499 aa		13.36	□□□□□ -0.27
SPOP-222	ENST00000577134	DIAPH1	O60610	1272 aa	Known RBP	13.36	□□□□□ -0.27
SPOP-222	ENST00000577134	IL13	P35225	146 aa		13.36	□□□□□ -0.27
SPOP-222	ENST00000577134	LARP1	Q6PKG0	1096 aa	Known RBP	13.36	□□□□□ -0.27
SPOP-222	ENST00000577134	UNC5CL	Q8IV45	518 aa		13.36	□□□□□ -0.27
SPOP-222	ENST00000577134	USP21	Q9UK80	565 aa		13.36	□□□□□ -0.27
SPOP-222	ENST00000577134	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	NBPF6	Q5VWK0	638 aa		13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	TOM1L2	Q6ZVM7	507 aa		13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	NBPF4	Q96M43	638 aa		13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	MRS2	Q9HD23	443 aa		13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	NLRP2	Q9NX02	1062 aa		13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	WDR17	Q8IZU2	1322 aa		13.34	□□□□□ -0.27
SPOP-222	ENST00000577134	EYA1	Q99502	592 aa		13.33	□□□□□ -0.28
SPOP-222	ENST00000577134	FAM208A	Q9UK61	1670 aa	Known RBP	13.33	□□□□□ -0.28
SPOP-222	ENST00000577134	CCER2	I3L3R5	266 aa		13.32	□□□□□ -0.28
SPOP-222	ENST00000577134	U2SURP	O15042	1029 aa	Known RBP	13.32	□□□□□ -0.28
SPOP-222	ENST00000577134	USHBP1	Q8N6Y0	703 aa		13.32	□□□□□ -0.28
SPOP-222	ENST00000577134	USP35	Q9P2H5	1018 aa		13.32	□□□□□ -0.28
SPOP-222	ENST00000577134	RGPD1	P0DJD0	1748 aa		13.32	□□□□□ -0.28
SPOP-222	ENST00000577134	CRB1	P82279	1406 aa		13.31	□□□□□ -0.28
SPOP-222	ENST00000577134	VPS72	Q15906	364 aa		13.31	□□□□□ -0.28
SPOP-222	ENST00000577134	QTRT2	Q9H974	415 aa	Known RBP	13.31	□□□□□ -0.28
SPOP-222	ENST00000577134	RGS17	Q9UGC6	210 aa	Predicted RBP	13.31	□□□□□ -0.28
SPOP-222	ENST00000577134	NUDC	Q9Y266	331 aa		13.31	□□□□□ -0.28
SPOP-222	ENST00000577134	CCDC9	Q9Y3X0	531 aa	Known RBP	13.31	□□□□□ -0.28
SPOP-222	ENST00000577134	ATRN	O75882	1429 aa		13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	ZNF772	Q68DY9	489 aa	Predicted RBP	13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	PHF23	Q9BUL5	403 aa	Predicted RBP	13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	CARD10	Q9BWT7	1032 aa		13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	TRPC5	Q9UL62	973 aa	Predicted RBP	13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	SPATA31A5	Q5VU36	1347 aa		13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	SPATA31A7	Q8IWB4	1347 aa		13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	IGSF1	Q8N6C5	1336 aa		13.3	□□□□□ -0.28
SPOP-222	ENST00000577134	HMOX1	P09601	288 aa		13.29	□□□□□ -0.28
SPOP-222	ENST00000577134	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.29	□□□□□ -0.28
SPOP-222	ENST00000577134	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
SPOP-222	ENST00000577134	SULT6B1	Q6IMI4	303 aa		13.29	□□□□□ -0.28
SPOP-222	ENST00000577134	AEBP1	Q8IUX7	1158 aa		13.29	□□□□□ -0.28
SPOP-222	ENST00000577134	SPATA31A1	Q5TZJ5	1347 aa		13.29	□□□□□ -0.28
SPOP-222	ENST00000577134	WDR43	Q15061	677 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
SPOP-222	ENST00000577134	TCP11L2	Q8N4U5	519 aa		13.28	□□□□□ -0.28
SPOP-222	ENST00000577134	PNISR	Q8TF01	805 aa	Known RBP	13.28	□□□□□ -0.28
SPOP-222	ENST00000577134	GJD4	Q96KN9	370 aa	Predicted RBP	13.27	□□□□□ -0.29
SPOP-222	ENST00000577134	ADAMTS8	Q9UP79	889 aa		13.27	□□□□□ -0.29
SPOP-222	ENST00000577134	NCAPD2	Q15021	1401 aa		13.27	□□□□□ -0.29
SPOP-222	ENST00000577134	GLI3	P10071	1580 aa		13.27	□□□□□ -0.29
SPOP-222	ENST00000577134	FAM9B	Q8IZU0	186 aa		13.26	□□□□□ -0.29
SPOP-222	ENST00000577134	WNK3	Q9BYP7	1800 aa		13.26	□□□□□ -0.29
SPOP-222	ENST00000577134	KDR	P35968	1356 aa		13.25	□□□□□ -0.29
SPOP-222	ENST00000577134	POTEA	Q6S8J7	498 aa		13.25	□□□□□ -0.29
SPOP-222	ENST00000577134	RSPH6A	Q9H0K4	717 aa		13.25	□□□□□ -0.29
SPOP-222	ENST00000577134	THRAP3	Q9Y2W1	955 aa	Known RBP	13.25	□□□□□ -0.29
SPOP-222	ENST00000577134	FCHSD2	O94868	740 aa		13.24	□□□□□ -0.29
SPOP-222	ENST00000577134	IL2RB	P14784	551 aa		13.24	□□□□□ -0.29
SPOP-222	ENST00000577134	FAM98C	Q17RN3	349 aa	Known RBP	13.24	□□□□□ -0.29
SPOP-222	ENST00000577134	BARGIN	Q6ZT62	677 aa		13.24	□□□□□ -0.29
SPOP-222	ENST00000577134	MEGF6	O75095	1541 aa		13.23	□□□□□ -0.29
SPOP-222	ENST00000577134	TAT	P17735	454 aa	Predicted RBP	13.23	□□□□□ -0.29
SPOP-222	ENST00000577134	PRKAR2B	P31323	418 aa		13.23	□□□□□ -0.29
SPOP-222	ENST00000577134	RBM6	P78332	1123 aa	Known RBP	13.23	□□□□□ -0.29
SPOP-222	ENST00000577134	CCDC146	Q8IYE0	955 aa		13.23	□□□□□ -0.29
SPOP-222	ENST00000577134	RAPGEF4	Q8WZA2	1011 aa		13.23	□□□□□ -0.29
SPOP-222	ENST00000577134	DISP2	A7MBM2	1401 aa		13.22	□□□□□ -0.29
SPOP-222	ENST00000577134	PARP4	Q9UKK3	1724 aa	Known RBP	13.22	□□□□□ -0.29
SPOP-222	ENST00000577134	RXRB	P28702	533 aa		13.22	□□□□□ -0.29

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