RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
CTNS-210ENST00000576979 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
CTNS-210ENST00000576979 IRF6O14896 467 aa8.42□□□□□ -1.06
CTNS-210ENST00000576979 ARHGEF15O94989 841 aa8.42□□□□□ -1.06
CTNS-210ENST00000576979 IGHA1P01876 353 aa8.42□□□□□ -1.06
CTNS-210ENST00000576979 NDUFV2P19404 249 aa8.42□□□□□ -1.06
CTNS-210ENST00000576979 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
CTNS-210ENST00000576979 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
CTNS-210ENST00000576979 GRM5P41594 1212 aa8.41□□□□□ -1.06
CTNS-210ENST00000576979 PTSQ03393 145 aa8.41□□□□□ -1.06
CTNS-210ENST00000576979 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
CTNS-210ENST00000576979 UPP2O95045 317 aa8.39□□□□□ -1.07
CTNS-210ENST00000576979 CTHP32929 405 aa8.39□□□□□ -1.07
CTNS-210ENST00000576979 KRTAP4-8Q9BYQ9 185 aa8.39□□□□□ -1.07
CTNS-210ENST00000576979 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
CTNS-210ENST00000576979 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
CTNS-210ENST00000576979 FIGNL2A6NMB9 653 aa8.38□□□□□ -1.07
CTNS-210ENST00000576979 NR5A1Q13285 461 aa8.38□□□□□ -1.07
CTNS-210ENST00000576979 CCDC102AQ96A19 550 aa8.38□□□□□ -1.07
CTNS-210ENST00000576979 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
CTNS-210ENST00000576979 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.37□□□□□ -1.07
CTNS-210ENST00000576979 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
CTNS-210ENST00000576979 PRXQ9BXM0 1461 aa8.37□□□□□ -1.07
CTNS-210ENST00000576979 CUX1P39880 1505 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 MOXD2PA6NHM9 499 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 TTLL8A6PVC2 850 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 MARSP56192 900 aaKnown RBP8.36□□□□□ -1.07
CTNS-210ENST00000576979 HOMEZQ8IX15 550 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 CCDC155Q8N6L0 562 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 SPIRE2Q8WWL2 714 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
CTNS-210ENST00000576979 KIF27Q86VH2 1401 aa8.36□□□□□ -1.07
CTNS-210ENST00000576979 ARAP1Q96P48 1450 aa8.35□□□□□ -1.07
CTNS-210ENST00000576979 ADAM23O75077 832 aa8.35□□□□□ -1.07
CTNS-210ENST00000576979 CLCN1P35523 988 aa8.35□□□□□ -1.07
CTNS-210ENST00000576979 FOXK2Q01167 660 aa8.35□□□□□ -1.07
CTNS-210ENST00000576979 KANK3Q6NY19 840 aa8.35□□□□□ -1.07
CTNS-210ENST00000576979 VWA5B2Q8N398 1253 aa8.34□□□□□ -1.07
CTNS-210ENST00000576979 SPTLC1O15269 473 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 ITGB2P05107 769 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 FSHRP23945 695 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 MTMR2Q13614 643 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 AGERQ15109 404 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
CTNS-210ENST00000576979 CFTRP13569 1480 aa8.32□□□□□ -1.08
CTNS-210ENST00000576979 MINK1Q8N4C8 1332 aaPredicted RBP8.32□□□□□ -1.08
CTNS-210ENST00000576979 CDC14CA4D256 554 aa8.32□□□□□ -1.08
CTNS-210ENST00000576979 RANGAP1P46060 587 aaPredicted RBP8.32□□□□□ -1.08
CTNS-210ENST00000576979 TMEM132AQ24JP5 1023 aa8.32□□□□□ -1.08
CTNS-210ENST00000576979 LYPD4Q6UWN0 246 aa8.32□□□□□ -1.08
CTNS-210ENST00000576979 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
CTNS-210ENST00000576979 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
CTNS-210ENST00000576979 CLSPNQ9HAW4 1339 aa8.31□□□□□ -1.08
CTNS-210ENST00000576979 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
CTNS-210ENST00000576979 SCARF2Q96GP6 870 aaPredicted RBP8.31□□□□□ -1.08
CTNS-210ENST00000576979 SLC35F4A4IF30 521 aa8.3□□□□□ -1.08
CTNS-210ENST00000576979 CFAP99D6REC4 459 aa8.3□□□□□ -1.08
CTNS-210ENST00000576979 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
CTNS-210ENST00000576979 SPOCK3Q9BQ16 436 aa8.3□□□□□ -1.08
CTNS-210ENST00000576979 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
CTNS-210ENST00000576979 MSTNO14793 375 aa8.29□□□□□ -1.08
CTNS-210ENST00000576979 ADAMTS2O95450 1211 aa8.29□□□□□ -1.08
CTNS-210ENST00000576979 ITGA6P23229 1130 aa8.29□□□□□ -1.08
CTNS-210ENST00000576979 CBLBQ13191 982 aa8.29□□□□□ -1.08
CTNS-210ENST00000576979 SSTR3P32745 418 aaPredicted RBP8.27□□□□□ -1.09
CTNS-210ENST00000576979 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
CTNS-210ENST00000576979 C14orf37Q86TY3 774 aa8.27□□□□□ -1.09
CTNS-210ENST00000576979 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
CTNS-210ENST00000576979 RRBP1Q9P2E9 1410 aaKnown RBP8.27□□□□□ -1.09
CTNS-210ENST00000576979 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
CTNS-210ENST00000576979 ARHGAP35Q9NRY4 1499 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 SPDYE5A6NIY4 337 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 BPHLQ86WA6 291 aaPredicted RBP8.26□□□□□ -1.09
CTNS-210ENST00000576979 DCAF5Q96JK2 942 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 C1QTNF2Q9BXJ5 285 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 PCDHB15Q9Y5E8 787 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 CUX2O14529 1486 aa8.26□□□□□ -1.09
CTNS-210ENST00000576979 MAP3K1Q13233 1512 aa8.25□□□□□ -1.09
CTNS-210ENST00000576979 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
CTNS-210ENST00000576979 PROCP04070 461 aa8.25□□□□□ -1.09
CTNS-210ENST00000576979 VASH1Q7L8A9 365 aaPredicted RBP8.25□□□□□ -1.09
CTNS-210ENST00000576979 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
CTNS-210ENST00000576979 TIAM1Q13009 1591 aa8.25□□□□□ -1.09
CTNS-210ENST00000576979 CNTNAP5Q8WYK1 1306 aa8.25□□□□□ -1.09
CTNS-210ENST00000576979 CTTNBP2Q8WZ74 1663 aa8.24□□□□□ -1.09
CTNS-210ENST00000576979 DHX57Q6P158 1386 aaKnown RBP8.24□□□□□ -1.09
CTNS-210ENST00000576979 SPINT1O43278 529 aa8.24□□□□□ -1.09
CTNS-210ENST00000576979 CELA2BP08218 269 aaPredicted RBP8.24□□□□□ -1.09
CTNS-210ENST00000576979 CCDC116Q8IYX3 515 aa8.24□□□□□ -1.09
CTNS-210ENST00000576979 EMILIN1Q9Y6C2 1016 aa8.24□□□□□ -1.09
CTNS-210ENST00000576979 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
CTNS-210ENST00000576979 CTSOP43234 321 aaPredicted RBP8.23□□□□□ -1.09
CTNS-210ENST00000576979 GAS6Q14393 721 aa8.23□□□□□ -1.09
CTNS-210ENST00000576979 FGD5Q6ZNL6 1462 aa8.23□□□□□ -1.09
CTNS-210ENST00000576979 CCNB3Q8WWL7 1395 aa8.22□□□□□ -1.09
CTNS-210ENST00000576979 SENP3-EIF4A1A0A087X0R7 540 aa8.22□□□□□ -1.09
CTNS-210ENST00000576979 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
CTNS-210ENST00000576979 AGBL1Q96MI9 1066 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms