RNA–Protein interactions for RNA: ENST00000576972.5

EDC4-212, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-212ENST00000576972 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
EDC4-212ENST00000576972 PDE3BQ13370 1112 aa21.6■■□□□ 1.05
EDC4-212ENST00000576972 BARGINQ6ZT62 677 aa21.6■■□□□ 1.05
EDC4-212ENST00000576972 BLMP54132 1417 aaPredicted RBP21.6■■□□□ 1.05
EDC4-212ENST00000576972 CRB1P82279 1406 aa21.59■■□□□ 1.05
EDC4-212ENST00000576972 COG3Q96JB2 828 aa21.59■■□□□ 1.05
EDC4-212ENST00000576972 THRAP3Q9Y2W1 955 aaKnown RBP21.59■■□□□ 1.05
EDC4-212ENST00000576972 EIF4G2P78344 907 aaKnown RBP eCLIP21.58■■□□□ 1.05
EDC4-212ENST00000576972 THSD7AQ9UPZ6 1657 aa21.58■■□□□ 1.05
EDC4-212ENST00000576972 ANKRD36BQ8N2N9 1353 aa21.58■■□□□ 1.04
EDC4-212ENST00000576972 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
EDC4-212ENST00000576972 NFAT5O94916 1531 aa21.57■■□□□ 1.04
EDC4-212ENST00000576972 DEFB132Q7Z7B7 95 aa21.57■■□□□ 1.04
EDC4-212ENST00000576972 WDR17Q8IZU2 1322 aa21.56■■□□□ 1.04
EDC4-212ENST00000576972 HSPA5P11021 654 aaKnown RBP21.55■■□□□ 1.04
EDC4-212ENST00000576972 COL18A1P39060 1754 aa21.55■■□□□ 1.04
EDC4-212ENST00000576972 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
EDC4-212ENST00000576972 GGNBP2Q9H3C7 697 aa21.53■■□□□ 1.04
EDC4-212ENST00000576972 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
EDC4-212ENST00000576972 BAG6P46379 1132 aa21.52■■□□□ 1.04
EDC4-212ENST00000576972 OVOS2A0A0J9YW53 1432 aa21.52■■□□□ 1.04
EDC4-212ENST00000576972 OVOS2Q6IE36 1432 aa21.52■■□□□ 1.04
EDC4-212ENST00000576972 CARD10Q9BWT7 1032 aa21.51■■□□□ 1.03
EDC4-212ENST00000576972 NLRP2Q9NX02 1062 aa21.51■■□□□ 1.03
EDC4-212ENST00000576972 USP54Q70EL1 1684 aa21.5■■□□□ 1.03
EDC4-212ENST00000576972 TRIM37O94972 964 aa21.5■■□□□ 1.03
EDC4-212ENST00000576972 DDB1Q16531 1140 aa21.5■■□□□ 1.03
EDC4-212ENST00000576972 FYB1O15117 783 aa21.49■■□□□ 1.03
EDC4-212ENST00000576972 FBLN1P23142 703 aa21.49■■□□□ 1.03
EDC4-212ENST00000576972 ANKRD24Q8TF21 1146 aa21.49■■□□□ 1.03
EDC4-212ENST00000576972 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
EDC4-212ENST00000576972 LTN1O94822 1766 aa21.48■■□□□ 1.03
EDC4-212ENST00000576972 AMPHP49418 695 aa21.48■■□□□ 1.03
EDC4-212ENST00000576972 EN1Q05925 392 aaPredicted RBP21.46■■□□□ 1.03
EDC4-212ENST00000576972 IP6K1Q92551 441 aa21.46■■□□□ 1.03
EDC4-212ENST00000576972 CDCA7Q9BWT1 371 aaPredicted RBP21.46■■□□□ 1.03
EDC4-212ENST00000576972 ERBB3P21860 1342 aa21.46■■□□□ 1.03
EDC4-212ENST00000576972 ABCC6O95255 1503 aa21.45■■□□□ 1.02
EDC4-212ENST00000576972 CARD14Q9BXL6 1004 aa21.45■■□□□ 1.02
EDC4-212ENST00000576972 MAP3K19Q56UN5 1328 aa21.45■■□□□ 1.02
EDC4-212ENST00000576972 CCDC7Q96M83 1385 aa21.45■■□□□ 1.02
EDC4-212ENST00000576972 NSD3Q9BZ95 1437 aa21.45■■□□□ 1.02
EDC4-212ENST00000576972 PARP4Q9UKK3 1724 aaKnown RBP21.44■■□□□ 1.02
EDC4-212ENST00000576972 APBA3O96018 575 aa21.44■■□□□ 1.02
EDC4-212ENST00000576972 RGPD1P0DJD0 1748 aa21.43■■□□□ 1.02
EDC4-212ENST00000576972 EXOC5O00471 708 aa21.43■■□□□ 1.02
EDC4-212ENST00000576972 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
EDC4-212ENST00000576972 MYOM1P52179 1685 aa21.43■■□□□ 1.02
EDC4-212ENST00000576972 HOXC9P31274 260 aa21.41■■□□□ 1.02
EDC4-212ENST00000576972 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
EDC4-212ENST00000576972 OVOS2A0A0G2JMS6 1433 aa21.39■■□□□ 1.02
EDC4-212ENST00000576972 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.02
EDC4-212ENST00000576972 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.01
EDC4-212ENST00000576972 IL2RBP14784 551 aa21.39■■□□□ 1.01
EDC4-212ENST00000576972 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
EDC4-212ENST00000576972 CGNL1Q0VF96 1302 aa21.38■■□□□ 1.01
EDC4-212ENST00000576972 MARCH10Q8NA82 808 aaPredicted RBP21.38■■□□□ 1.01
EDC4-212ENST00000576972 WNK3Q9BYP7 1800 aa21.38■■□□□ 1.01
EDC4-212ENST00000576972 DISP2A7MBM2 1401 aa21.37■■□□□ 1.01
EDC4-212ENST00000576972 TNS1Q9HBL0 1735 aaKnown RBP21.36■■□□□ 1.01
EDC4-212ENST00000576972 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
EDC4-212ENST00000576972 PANK3Q9H999 370 aa21.36■■□□□ 1.01
EDC4-212ENST00000576972 PSDA5PKW4 1024 aaPredicted RBP21.34■■□□□ 1.01
EDC4-212ENST00000576972 RTL1A6NKG5 1358 aa21.34■■□□□ 1.01
EDC4-212ENST00000576972 TNNT2P45379 298 aaPredicted RBP21.33■■□□□ 1.01
EDC4-212ENST00000576972 CAMKK2Q96RR4 588 aa21.33■■□□□ 1.01
EDC4-212ENST00000576972 LRP5O75197 1615 aa21.33■■□□□ 1
EDC4-212ENST00000576972 TNS2Q63HR2 1409 aa21.32■■□□□ 1
EDC4-212ENST00000576972 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
EDC4-212ENST00000576972 HSP90AB2PQ58FF8 381 aa21.32■■□□□ 1
EDC4-212ENST00000576972 EMILIN1Q9Y6C2 1016 aa21.32■■□□□ 1
EDC4-212ENST00000576972 USHBP1Q8N6Y0 703 aa21.31■■□□□ 1
EDC4-212ENST00000576972 DDX54Q8TDD1 881 aaKnown RBP21.3■■□□□ 1
EDC4-212ENST00000576972 ACSBG1Q96GR2 724 aa21.3■■□□□ 1
EDC4-212ENST00000576972 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
EDC4-212ENST00000576972 FLT4P35916 1363 aa21.3■■□□□ 1
EDC4-212ENST00000576972 PEAK1Q9H792 1746 aa21.29■■□□□ 1
EDC4-212ENST00000576972 PTF1AQ7RTS3 328 aa21.29■■□□□ 1
EDC4-212ENST00000576972 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
EDC4-212ENST00000576972 R3HDM1Q15032 1099 aaKnown RBP21.28■■□□□ 1
EDC4-212ENST00000576972 NBPF6Q5VWK0 638 aa21.28■■□□□ 1
EDC4-212ENST00000576972 NBPF4Q96M43 638 aa21.28■■□□□ 1
EDC4-212ENST00000576972 INSRP06213 1382 aa21.27■■□□□ 1
EDC4-212ENST00000576972 PARD3Q8TEW0 1356 aa21.27■■□□□ 1
EDC4-212ENST00000576972 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
EDC4-212ENST00000576972 KIF7Q2M1P5 1343 aa21.27■□□□□ 0.99
EDC4-212ENST00000576972 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
EDC4-212ENST00000576972 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
EDC4-212ENST00000576972 KCNQ2O43526 872 aa21.25■□□□□ 0.99
EDC4-212ENST00000576972 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
EDC4-212ENST00000576972 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
EDC4-212ENST00000576972 KIF24Q5T7B8 1368 aa21.24■□□□□ 0.99
EDC4-212ENST00000576972 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
EDC4-212ENST00000576972 ZCRB1Q8TBF4 217 aaKnown RBP21.24■□□□□ 0.99
EDC4-212ENST00000576972 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
EDC4-212ENST00000576972 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
EDC4-212ENST00000576972 BCL9O00512 1426 aa21.22■□□□□ 0.99
EDC4-212ENST00000576972 PLSCR1O15162 318 aa21.22■□□□□ 0.99
EDC4-212ENST00000576972 MEGF6O75095 1541 aa21.2■□□□□ 0.98
EDC4-212ENST00000576972 SYTL4Q96C24 671 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms