RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 BCL9O00512 1426 aa22.51■■□□□ 1.19
SLC12A4-216ENST00000576377 DDB1Q16531 1140 aa22.5■■□□□ 1.19
SLC12A4-216ENST00000576377 TOMM70O94826 608 aa22.49■■□□□ 1.19
SLC12A4-216ENST00000576377 WNK3Q9BYP7 1800 aa22.49■■□□□ 1.19
SLC12A4-216ENST00000576377 QSER1Q2KHR3 1735 aa22.48■■□□□ 1.19
SLC12A4-216ENST00000576377 COL5A2P05997 1499 aaPredicted RBP22.48■■□□□ 1.19
SLC12A4-216ENST00000576377 SAFB2Q14151 953 aaKnown RBP eCLIP22.48■■□□□ 1.19
SLC12A4-216ENST00000576377 TUBGCP6Q96RT7 1819 aa22.46■■□□□ 1.19
SLC12A4-216ENST00000576377 NUTM2GQ5VZR2 741 aa22.46■■□□□ 1.19
SLC12A4-216ENST00000576377 TULP4Q9NRJ4 1543 aa22.46■■□□□ 1.19
SLC12A4-216ENST00000576377 HSPA1AP0DMV8 641 aaKnown RBP22.45■■□□□ 1.18
SLC12A4-216ENST00000576377 HSPA1BP0DMV9 641 aaKnown RBP22.45■■□□□ 1.18
SLC12A4-216ENST00000576377 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
SLC12A4-216ENST00000576377 PRR36Q9H6K5 1346 aa22.45■■□□□ 1.18
SLC12A4-216ENST00000576377 CRB1P82279 1406 aa22.45■■□□□ 1.18
SLC12A4-216ENST00000576377 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
SLC12A4-216ENST00000576377 FAM161AQ3B820 660 aa22.43■■□□□ 1.18
SLC12A4-216ENST00000576377 NHSQ6T4R5 1651 aa22.42■■□□□ 1.18
SLC12A4-216ENST00000576377 PNPLA7Q6ZV29 1317 aa22.41■■□□□ 1.18
SLC12A4-216ENST00000576377 SIRT1Q96EB6 747 aa22.41■■□□□ 1.18
SLC12A4-216ENST00000576377 CPDO75976 1380 aa22.39■■□□□ 1.18
SLC12A4-216ENST00000576377 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.17
SLC12A4-216ENST00000576377 NGDNQ8NEJ9 315 aaKnown RBP22.38■■□□□ 1.17
SLC12A4-216ENST00000576377 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
SLC12A4-216ENST00000576377 PRAM1Q96QH2 718 aa22.38■■□□□ 1.17
SLC12A4-216ENST00000576377 PIK3C2GO75747 1445 aa22.36■■□□□ 1.17
SLC12A4-216ENST00000576377 NMRK2Q9NPI5 230 aa22.35■■□□□ 1.17
SLC12A4-216ENST00000576377 BTAF1O14981 1849 aa22.34■■□□□ 1.17
SLC12A4-216ENST00000576377 RBM46Q8TBY0 533 aaKnown RBP22.32■■□□□ 1.16
SLC12A4-216ENST00000576377 HIRIP3Q9BW71 556 aaPredicted RBP22.32■■□□□ 1.16
SLC12A4-216ENST00000576377 ANKRD30BQ9BXX2 1392 aa22.3■■□□□ 1.16
SLC12A4-216ENST00000576377 ACSBG1Q96GR2 724 aa22.3■■□□□ 1.16
SLC12A4-216ENST00000576377 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
SLC12A4-216ENST00000576377 CICQ96RK0 1608 aaPredicted RBP22.27■■□□□ 1.16
SLC12A4-216ENST00000576377 USP19O94966 1318 aa22.27■■□□□ 1.16
SLC12A4-216ENST00000576377 TOM1L2Q6ZVM7 507 aa22.26■■□□□ 1.15
SLC12A4-216ENST00000576377 MSL1Q68DK7 614 aa22.25■■□□□ 1.15
SLC12A4-216ENST00000576377 TFCP2L1Q9NZI6 479 aa22.24■■□□□ 1.15
SLC12A4-216ENST00000576377 CD2APQ9Y5K6 639 aa22.24■■□□□ 1.15
SLC12A4-216ENST00000576377 EIF3AQ14152 1382 aaKnown RBP22.24■■□□□ 1.15
SLC12A4-216ENST00000576377 KIAA1210Q9ULL0 1709 aa22.23■■□□□ 1.15
SLC12A4-216ENST00000576377 FSTL1Q12841 308 aa22.23■■□□□ 1.15
SLC12A4-216ENST00000576377 POGKQ9P215 609 aa22.23■■□□□ 1.15
SLC12A4-216ENST00000576377 ITSN1Q15811 1721 aa22.23■■□□□ 1.15
SLC12A4-216ENST00000576377 USP6P35125 1406 aa22.23■■□□□ 1.15
SLC12A4-216ENST00000576377 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
SLC12A4-216ENST00000576377 MINK1Q8N4C8 1332 aaPredicted RBP22.22■■□□□ 1.15
SLC12A4-216ENST00000576377 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
SLC12A4-216ENST00000576377 KCNQ4P56696 695 aa22.2■■□□□ 1.14
SLC12A4-216ENST00000576377 CDCA7Q9BWT1 371 aaPredicted RBP22.2■■□□□ 1.14
SLC12A4-216ENST00000576377 IGSF1Q8N6C5 1336 aa22.2■■□□□ 1.14
SLC12A4-216ENST00000576377 TRPM1Q7Z4N2 1603 aa22.2■■□□□ 1.14
SLC12A4-216ENST00000576377 GCP02774 474 aa22.19■■□□□ 1.14
SLC12A4-216ENST00000576377 APLP2Q06481 763 aa22.19■■□□□ 1.14
SLC12A4-216ENST00000576377 COL18A1P39060 1754 aa22.18■■□□□ 1.14
SLC12A4-216ENST00000576377 SPATA31E1Q6ZUB1 1445 aa22.18■■□□□ 1.14
SLC12A4-216ENST00000576377 C16orf71Q8IYS4 520 aaPredicted RBP22.18■■□□□ 1.14
SLC12A4-216ENST00000576377 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
SLC12A4-216ENST00000576377 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
SLC12A4-216ENST00000576377 EXOC5O00471 708 aa22.16■■□□□ 1.14
SLC12A4-216ENST00000576377 ABTB2Q8N961 1025 aa22.16■■□□□ 1.14
SLC12A4-216ENST00000576377 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
SLC12A4-216ENST00000576377 MSH5O43196 834 aa22.15■■□□□ 1.14
SLC12A4-216ENST00000576377 CFAP70Q5T0N1 1121 aa22.15■■□□□ 1.14
SLC12A4-216ENST00000576377 PIK3C2AO00443 1686 aa22.14■■□□□ 1.14
SLC12A4-216ENST00000576377 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
SLC12A4-216ENST00000576377 ABCC6O95255 1503 aa22.14■■□□□ 1.13
SLC12A4-216ENST00000576377 KAT6BQ8WYB5 2073 aa22.14■■□□□ 1.13
SLC12A4-216ENST00000576377 SLC27A3Q5K4L6 730 aa22.13■■□□□ 1.13
SLC12A4-216ENST00000576377 ITGAEP38570 1179 aa22.12■■□□□ 1.13
SLC12A4-216ENST00000576377 MLLT1Q03111 559 aaPredicted RBP22.12■■□□□ 1.13
SLC12A4-216ENST00000576377 AXIN2Q9Y2T1 843 aa22.11■■□□□ 1.13
SLC12A4-216ENST00000576377 RGPD5Q99666 1765 aa22.1■■□□□ 1.13
SLC12A4-216ENST00000576377 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
SLC12A4-216ENST00000576377 FOXN1O15353 648 aa22.08■■□□□ 1.13
SLC12A4-216ENST00000576377 NUDT16Q96DE0 195 aaKnown RBP22.08■■□□□ 1.13
SLC12A4-216ENST00000576377 ACEP12821 1306 aa22.07■■□□□ 1.12
SLC12A4-216ENST00000576377 ABHD8Q96I13 439 aa22.07■■□□□ 1.12
SLC12A4-216ENST00000576377 CARD10Q9BWT7 1032 aa22.07■■□□□ 1.12
SLC12A4-216ENST00000576377 KCPQ6ZWJ8 1503 aa22.06■■□□□ 1.12
SLC12A4-216ENST00000576377 TNRC18O15417 2968 aaPredicted RBP22.06■■□□□ 1.12
SLC12A4-216ENST00000576377 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
SLC12A4-216ENST00000576377 PRDM10Q9NQV6 1147 aa22.05■■□□□ 1.12
SLC12A4-216ENST00000576377 LY75O60449 1722 aa22.05■■□□□ 1.12
SLC12A4-216ENST00000576377 PPIP5K1Q6PFW1 1433 aa22.05■■□□□ 1.12
SLC12A4-216ENST00000576377 TRAK1Q9UPV9 953 aa22.04■■□□□ 1.12
SLC12A4-216ENST00000576377 SLIT3O75094 1523 aa22.04■■□□□ 1.12
SLC12A4-216ENST00000576377 C10orf71Q711Q0 1435 aa22.04■■□□□ 1.12
SLC12A4-216ENST00000576377 ADGRB1O14514 1584 aa22.03■■□□□ 1.12
SLC12A4-216ENST00000576377 PKD1L3Q7Z443 1732 aa22.03■■□□□ 1.12
SLC12A4-216ENST00000576377 SMC1BQ8NDV3 1235 aa22.02■■□□□ 1.12
SLC12A4-216ENST00000576377 QRICH2Q9H0J4 1663 aa22.01■■□□□ 1.11
SLC12A4-216ENST00000576377 TNRC6CQ9HCJ0 1690 aaKnown RBP22.01■■□□□ 1.11
SLC12A4-216ENST00000576377 CSB-PGBD3P0DP91 1061 aa22■■□□□ 1.11
SLC12A4-216ENST00000576377 RGS19P49795 217 aa21.99■■□□□ 1.11
SLC12A4-216ENST00000576377 RRAGCQ9HB90 399 aa21.99■■□□□ 1.11
SLC12A4-216ENST00000576377 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
SLC12A4-216ENST00000576377 PXDNLA1KZ92 1463 aa21.98■■□□□ 1.11
SLC12A4-216ENST00000576377 KIAA1551Q9HCM1 1747 aa21.97■■□□□ 1.11
SLC12A4-216ENST00000576377 PDE4DIPQ5VU43 2346 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms