RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 EML3Q32P44 896 aa11□□□□□ -0.65
TOM1L1-222ENST00000575909 TMCO4Q5TGY1 634 aa11□□□□□ -0.65
TOM1L1-222ENST00000575909 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
TOM1L1-222ENST00000575909 ZNF511Q8NB15 262 aa11□□□□□ -0.65
TOM1L1-222ENST00000575909 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
TOM1L1-222ENST00000575909 ZMIZ1Q9ULJ6 1067 aa11□□□□□ -0.65
TOM1L1-222ENST00000575909 FCF1Q9Y324 198 aaKnown RBP11□□□□□ -0.65
TOM1L1-222ENST00000575909 RASA1P20936 1047 aa10.99□□□□□ -0.65
TOM1L1-222ENST00000575909 TMEM164Q5U3C3 297 aa10.99□□□□□ -0.65
TOM1L1-222ENST00000575909 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L21D6R901 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 ERFEQ4G0M1 354 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 TRAF7Q6Q0C0 670 aa10.98□□□□□ -0.65
TOM1L1-222ENST00000575909 PTK7Q13308 1070 aa10.97□□□□□ -0.65
TOM1L1-222ENST00000575909 CRTC2Q53ET0 693 aaPredicted RBP10.97□□□□□ -0.65
TOM1L1-222ENST00000575909 RNF20Q5VTR2 975 aa10.97□□□□□ -0.65
TOM1L1-222ENST00000575909 TRIM50Q86XT4 487 aa10.97□□□□□ -0.65
TOM1L1-222ENST00000575909 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
TOM1L1-222ENST00000575909 FOXJ1Q92949 421 aa10.97□□□□□ -0.65
TOM1L1-222ENST00000575909 LINC01559Q495D7 138 aa10.96□□□□□ -0.65
TOM1L1-222ENST00000575909 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
TOM1L1-222ENST00000575909 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
TOM1L1-222ENST00000575909 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 NBPF20Q3BBV1 942 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 SLC10A4Q96EP9 437 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 PCDH10Q9P2E7 1040 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 CDV3Q9UKY7 258 aaKnown RBP10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 NOD1Q9Y239 953 aa10.95□□□□□ -0.66
TOM1L1-222ENST00000575909 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
TOM1L1-222ENST00000575909 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
TOM1L1-222ENST00000575909 C1QTNF2Q9BXJ5 285 aa10.94□□□□□ -0.66
TOM1L1-222ENST00000575909 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
TOM1L1-222ENST00000575909 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
TOM1L1-222ENST00000575909 ANKMY2Q8IV38 441 aa10.93□□□□□ -0.66
TOM1L1-222ENST00000575909 TRMT44Q8IYL2 757 aaKnown RBP10.93□□□□□ -0.66
TOM1L1-222ENST00000575909 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
TOM1L1-222ENST00000575909 CCDC85AQ96PX6 553 aaPredicted RBP10.93□□□□□ -0.66
TOM1L1-222ENST00000575909 ZBTB24O43167 697 aaPredicted RBP10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 SH3BP2P78314 561 aa10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 KCNC4Q03721 635 aa10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 LARGE2Q8N3Y3 721 aa10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 DNAAF2Q9NVR5 837 aaKnown RBP10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 GNEQ9Y223 722 aaKnown RBP10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 IVNS1ABPQ9Y6Y0 642 aa10.92□□□□□ -0.66
TOM1L1-222ENST00000575909 RANGAP1P46060 587 aaPredicted RBP10.91□□□□□ -0.66
TOM1L1-222ENST00000575909 MFAP1P55081 439 aaKnown RBP10.91□□□□□ -0.66
TOM1L1-222ENST00000575909 SEPT12Q8IYM1 358 aa10.91□□□□□ -0.66
TOM1L1-222ENST00000575909 ESPNB1AK53 854 aa10.9□□□□□ -0.66
TOM1L1-222ENST00000575909 ITGBL1O95965 494 aaPredicted RBP10.9□□□□□ -0.66
TOM1L1-222ENST00000575909 CLDN10P78369 228 aa10.9□□□□□ -0.66
TOM1L1-222ENST00000575909 SIRT1Q96EB6 747 aa10.9□□□□□ -0.66
TOM1L1-222ENST00000575909 HCSTQ9UBK5 93 aa10.9□□□□□ -0.66
TOM1L1-222ENST00000575909 GGCXP38435 758 aa10.89□□□□□ -0.67
TOM1L1-222ENST00000575909 FAM69CQ0P6D2 419 aa10.89□□□□□ -0.67
TOM1L1-222ENST00000575909 DPYDQ12882 1025 aa10.89□□□□□ -0.67
TOM1L1-222ENST00000575909 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
TOM1L1-222ENST00000575909 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
TOM1L1-222ENST00000575909 CLP1Q92989 425 aaKnown RBP10.89□□□□□ -0.67
TOM1L1-222ENST00000575909 TRIM32Q13049 653 aa10.88□□□□□ -0.67
TOM1L1-222ENST00000575909 USP4Q13107 963 aa10.88□□□□□ -0.67
TOM1L1-222ENST00000575909 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
TOM1L1-222ENST00000575909 ZNF594Q96JF6 807 aaPredicted RBP10.88□□□□□ -0.67
TOM1L1-222ENST00000575909 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 PPEF1O14829 653 aaPredicted RBP10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 SSFA2P28290 1259 aa10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 WNT7BP56706 349 aa10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 SIX5Q8N196 739 aa10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 CCER1Q8TC90 406 aaPredicted RBP10.87□□□□□ -0.67
TOM1L1-222ENST00000575909 ZBTB7BO15156 539 aaPredicted RBP10.86□□□□□ -0.67
TOM1L1-222ENST00000575909 GTF2IP78347 998 aa10.86□□□□□ -0.67
TOM1L1-222ENST00000575909 PHLDB3Q6NSJ2 640 aa10.86□□□□□ -0.67
TOM1L1-222ENST00000575909 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
TOM1L1-222ENST00000575909 RBM19Q9Y4C8 960 aaKnown RBP10.86□□□□□ -0.67
TOM1L1-222ENST00000575909 SND1Q7KZF4 910 aaKnown RBP eCLIP10.85□□□□□ -0.67
TOM1L1-222ENST00000575909 PCDHB11Q9Y5F2 797 aa10.85□□□□□ -0.67
TOM1L1-222ENST00000575909 DKK1O94907 266 aa10.84□□□□□ -0.67
TOM1L1-222ENST00000575909 SEC13P55735 322 aa10.84□□□□□ -0.67
TOM1L1-222ENST00000575909 TXNDC2Q86VQ3 553 aa10.84□□□□□ -0.67
TOM1L1-222ENST00000575909 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
TOM1L1-222ENST00000575909 MAP4K5Q9Y4K4 846 aa10.84□□□□□ -0.67
TOM1L1-222ENST00000575909 ARID4AP29374 1257 aaPredicted RBP10.83□□□□□ -0.68
TOM1L1-222ENST00000575909 RPIAP49247 311 aa10.83□□□□□ -0.68
TOM1L1-222ENST00000575909 CCDC102BQ68D86 513 aa10.83□□□□□ -0.68
TOM1L1-222ENST00000575909 SLAIN2Q9P270 581 aa10.83□□□□□ -0.68
TOM1L1-222ENST00000575909 KIAA1024Q9UPX6 916 aa10.83□□□□□ -0.68
TOM1L1-222ENST00000575909 PCDHGA11Q9Y5H2 935 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms