RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 PSMA5P28066 241 aa12.38□□□□□ -0.43
USP6-206ENST00000575709 STK38Q15208 465 aa12.38□□□□□ -0.43
USP6-206ENST00000575709 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
USP6-206ENST00000575709 KIF5CO60282 957 aa12.38□□□□□ -0.43
USP6-206ENST00000575709 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
USP6-206ENST00000575709 MXRA7P84157 204 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 RSRC1Q96IZ7 334 aaKnown RBP12.37□□□□□ -0.43
USP6-206ENST00000575709 IVLP07476 585 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 GBP7Q8N8V2 638 aaPredicted RBP12.37□□□□□ -0.43
USP6-206ENST00000575709 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 ME1P48163 572 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 CFAP58Q5T655 872 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 RNF168Q8IYW5 571 aaPredicted RBP12.37□□□□□ -0.43
USP6-206ENST00000575709 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 KIF5BP33176 963 aa12.37□□□□□ -0.43
USP6-206ENST00000575709 KIF4AO95239 1232 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 PSMD1Q99460 953 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 FERP16591 822 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 DNA2P51530 1060 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
USP6-206ENST00000575709 CCDC174Q6PII3 467 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 CWC25Q9NXE8 425 aaPredicted RBP12.36□□□□□ -0.43
USP6-206ENST00000575709 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
USP6-206ENST00000575709 NINLQ9Y2I6 1382 aa12.35□□□□□ -0.43
USP6-206ENST00000575709 C10orf67Q8IYJ2 551 aa12.35□□□□□ -0.43
USP6-206ENST00000575709 IKQ13123 557 aaPredicted RBP12.35□□□□□ -0.43
USP6-206ENST00000575709 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
USP6-206ENST00000575709 KIF2AO00139 706 aaPredicted RBP12.35□□□□□ -0.43
USP6-206ENST00000575709 DESP17661 470 aa12.35□□□□□ -0.43
USP6-206ENST00000575709 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
USP6-206ENST00000575709 GOLIM4O00461 696 aa12.35□□□□□ -0.43
USP6-206ENST00000575709 C16orf45Q96MC5 204 aaPredicted RBP12.35□□□□□ -0.43
USP6-206ENST00000575709 CFDP1Q9UEE9 299 aaPredicted RBP12.35□□□□□ -0.43
USP6-206ENST00000575709 ERCC3P19447 782 aa12.35□□□□□ -0.43
USP6-206ENST00000575709 CTNNBL1Q8WYA6 563 aaPredicted RBP12.35□□□□□ -0.43
USP6-206ENST00000575709 PDCP20941 246 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 HLTFQ14527 1009 aaKnown RBP eCLIP12.34□□□□□ -0.43
USP6-206ENST00000575709 ERC1Q8IUD2 1116 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 EIF5P55010 431 aaKnown RBP12.34□□□□□ -0.43
USP6-206ENST00000575709 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
USP6-206ENST00000575709 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
USP6-206ENST00000575709 PPM1FP49593 454 aaPredicted RBP12.34□□□□□ -0.43
USP6-206ENST00000575709 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 CFAP100Q494V2 611 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 MRVI1Q9Y6F6 885 aa12.34□□□□□ -0.43
USP6-206ENST00000575709 HOOK3Q86VS8 718 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 TPD52P55327 224 aaPredicted RBP12.33□□□□□ -0.44
USP6-206ENST00000575709 WASHC4Q2M389 1173 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 CEP162Q5TB80 1403 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 SPA17Q15506 151 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 SYCE3A1L190 88 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 CDC45O75419 566 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
USP6-206ENST00000575709 NEK4P51957 841 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 TRMT1Q9NXH9 659 aaKnown RBP12.33□□□□□ -0.44
USP6-206ENST00000575709 ERC2O15083 957 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 ANKS4BQ8N8V4 417 aa12.33□□□□□ -0.44
USP6-206ENST00000575709 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
USP6-206ENST00000575709 DYNC1I1O14576 645 aa12.32□□□□□ -0.44
USP6-206ENST00000575709 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP6-206ENST00000575709 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
USP6-206ENST00000575709 LIG1P18858 919 aa12.32□□□□□ -0.44
USP6-206ENST00000575709 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
USP6-206ENST00000575709 PSMC4P43686 418 aa12.32□□□□□ -0.44
USP6-206ENST00000575709 HSF2BPO75031 334 aa12.32□□□□□ -0.44
USP6-206ENST00000575709 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 JMYQ8N9B5 988 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 ROCK1Q13464 1354 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 GOLGA6L9A6NEM1 432 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 SMTNL1A8MU46 457 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 PPP1R14CQ8TAE6 165 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 DRC1Q96MC2 740 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 COMMD10Q9Y6G5 202 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 MATR3P43243 847 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP6-206ENST00000575709 STK3Q13188 491 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
USP6-206ENST00000575709 CAMK4Q16566 473 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 NLRP13Q86W25 1043 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 SFPQP23246 707 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP6-206ENST00000575709 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 ZNF853P0CG23 659 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
USP6-206ENST00000575709 CETN2P41208 172 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 LARP1Q6PKG0 1096 aaKnown RBP12.3□□□□□ -0.44
USP6-206ENST00000575709 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 A0A1B0GUA9 196 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 CCDC121Q6ZUS5 278 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 OTUD6BQ8N6M0 293 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
USP6-206ENST00000575709 PPP1R12BO60237 982 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms