RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
USP43-206ENST00000575346 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
USP43-206ENST00000575346 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
USP43-206ENST00000575346 ANKRD36BQ8N2N9 1353 aa16.79■□□□□ 0.28
USP43-206ENST00000575346 CDCA8Q53HL2 280 aa16.79■□□□□ 0.28
USP43-206ENST00000575346 DEFB132Q7Z7B7 95 aa16.79■□□□□ 0.28
USP43-206ENST00000575346 CCER1Q8TC90 406 aaPredicted RBP16.79■□□□□ 0.28
USP43-206ENST00000575346 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
USP43-206ENST00000575346 PARP4Q9UKK3 1724 aaKnown RBP16.79■□□□□ 0.28
USP43-206ENST00000575346 WDR17Q8IZU2 1322 aa16.78■□□□□ 0.28
USP43-206ENST00000575346 RGPD5Q99666 1765 aa16.77■□□□□ 0.28
USP43-206ENST00000575346 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
USP43-206ENST00000575346 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
USP43-206ENST00000575346 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
USP43-206ENST00000575346 SOX12O15370 315 aa16.75■□□□□ 0.27
USP43-206ENST00000575346 FAM196AQ6ZSG2 479 aa16.75■□□□□ 0.27
USP43-206ENST00000575346 LTN1O94822 1766 aa16.74■□□□□ 0.27
USP43-206ENST00000575346 DISP2A7MBM2 1401 aa16.74■□□□□ 0.27
USP43-206ENST00000575346 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
USP43-206ENST00000575346 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
USP43-206ENST00000575346 WNK3Q9BYP7 1800 aa16.74■□□□□ 0.27
USP43-206ENST00000575346 PDE3BQ13370 1112 aa16.73■□□□□ 0.27
USP43-206ENST00000575346 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
USP43-206ENST00000575346 TNS1Q9HBL0 1735 aaKnown RBP16.73■□□□□ 0.27
USP43-206ENST00000575346 MYOM1P52179 1685 aa16.72■□□□□ 0.27
USP43-206ENST00000575346 BAG6P46379 1132 aa16.72■□□□□ 0.27
USP43-206ENST00000575346 CDCA7Q9BWT1 371 aaPredicted RBP16.72■□□□□ 0.27
USP43-206ENST00000575346 LRRC37A3O60309 1634 aa16.71■□□□□ 0.27
USP43-206ENST00000575346 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
USP43-206ENST00000575346 COG3Q96JB2 828 aa16.71■□□□□ 0.27
USP43-206ENST00000575346 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
USP43-206ENST00000575346 ERBB3P21860 1342 aa16.7■□□□□ 0.26
USP43-206ENST00000575346 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
USP43-206ENST00000575346 FYB1O15117 783 aa16.69■□□□□ 0.26
USP43-206ENST00000575346 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
USP43-206ENST00000575346 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
USP43-206ENST00000575346 DDB1Q16531 1140 aa16.68■□□□□ 0.26
USP43-206ENST00000575346 IP6K1Q92551 441 aa16.68■□□□□ 0.26
USP43-206ENST00000575346 OVOS2A0A0G2JMS6 1433 aa16.67■□□□□ 0.26
USP43-206ENST00000575346 BCL9O00512 1426 aa16.67■□□□□ 0.26
USP43-206ENST00000575346 TRIM37O94972 964 aa16.66■□□□□ 0.26
USP43-206ENST00000575346 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
USP43-206ENST00000575346 FAM208AQ9UK61 1670 aaKnown RBP16.65■□□□□ 0.26
USP43-206ENST00000575346 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
USP43-206ENST00000575346 ANKRD24Q8TF21 1146 aa16.65■□□□□ 0.26
USP43-206ENST00000575346 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
USP43-206ENST00000575346 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
USP43-206ENST00000575346 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.26
USP43-206ENST00000575346 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
USP43-206ENST00000575346 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
USP43-206ENST00000575346 GGNBP2Q9H3C7 697 aa16.64■□□□□ 0.25
USP43-206ENST00000575346 RTL1A6NKG5 1358 aa16.64■□□□□ 0.25
USP43-206ENST00000575346 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
USP43-206ENST00000575346 HOXC9P31274 260 aa16.63■□□□□ 0.25
USP43-206ENST00000575346 CAMKK2Q96RR4 588 aa16.63■□□□□ 0.25
USP43-206ENST00000575346 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
USP43-206ENST00000575346 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
USP43-206ENST00000575346 EXOC5O00471 708 aa16.62■□□□□ 0.25
USP43-206ENST00000575346 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
USP43-206ENST00000575346 NLRP2Q9NX02 1062 aa16.62■□□□□ 0.25
USP43-206ENST00000575346 APBA3O96018 575 aa16.61■□□□□ 0.25
USP43-206ENST00000575346 FBLN1P23142 703 aa16.61■□□□□ 0.25
USP43-206ENST00000575346 KIF24Q5T7B8 1368 aa16.61■□□□□ 0.25
USP43-206ENST00000575346 RREB1Q92766 1687 aa16.6■□□□□ 0.25
USP43-206ENST00000575346 IL2RBP14784 551 aa16.6■□□□□ 0.25
USP43-206ENST00000575346 AMPHP49418 695 aa16.6■□□□□ 0.25
USP43-206ENST00000575346 EZH2Q15910 746 aaKnown RBP16.6■□□□□ 0.25
USP43-206ENST00000575346 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
USP43-206ENST00000575346 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
USP43-206ENST00000575346 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
USP43-206ENST00000575346 BCL11BQ9C0K0 894 aaPredicted RBP16.58■□□□□ 0.24
USP43-206ENST00000575346 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
USP43-206ENST00000575346 PLSCR1O15162 318 aa16.57■□□□□ 0.24
USP43-206ENST00000575346 INSRP06213 1382 aa16.56■□□□□ 0.24
USP43-206ENST00000575346 FLT4P35916 1363 aa16.56■□□□□ 0.24
USP43-206ENST00000575346 R3HDM1Q15032 1099 aaKnown RBP16.56■□□□□ 0.24
USP43-206ENST00000575346 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
USP43-206ENST00000575346 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
USP43-206ENST00000575346 LRP5O75197 1615 aa16.56■□□□□ 0.24
USP43-206ENST00000575346 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
USP43-206ENST00000575346 RGPD2P0DJD1 1756 aa16.55■□□□□ 0.24
USP43-206ENST00000575346 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
USP43-206ENST00000575346 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
USP43-206ENST00000575346 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
USP43-206ENST00000575346 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
USP43-206ENST00000575346 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
USP43-206ENST00000575346 PTF1AQ7RTS3 328 aa16.52■□□□□ 0.24
USP43-206ENST00000575346 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
USP43-206ENST00000575346 PANK3Q9H999 370 aa16.52■□□□□ 0.24
USP43-206ENST00000575346 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
USP43-206ENST00000575346 NSD2O96028 1365 aa16.51■□□□□ 0.23
USP43-206ENST00000575346 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
USP43-206ENST00000575346 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
USP43-206ENST00000575346 MEGF6O75095 1541 aa16.5■□□□□ 0.23
USP43-206ENST00000575346 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
USP43-206ENST00000575346 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
USP43-206ENST00000575346 NBPF14Q5TI25 921 aa16.49■□□□□ 0.23
USP43-206ENST00000575346 KCNQ2O43526 872 aa16.48■□□□□ 0.23
USP43-206ENST00000575346 PROM2Q8N271 834 aa16.48■□□□□ 0.23
USP43-206ENST00000575346 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms