RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 WDR17Q8IZU2 1322 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 TTC21AQ8NDW8 1320 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 ABCC6O95255 1503 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 TOM1L2Q6ZVM7 507 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 KCNH5Q8NCM2 988 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
TVP23B-208ENST00000575261 NFAT5O94916 1531 aa14.92□□□□□ -0.02
TVP23B-208ENST00000575261 SBF2Q86WG5 1849 aa14.92□□□□□ -0.02
TVP23B-208ENST00000575261 RGPD5Q99666 1765 aa14.91□□□□□ -0.02
TVP23B-208ENST00000575261 USP54Q70EL1 1684 aa14.91□□□□□ -0.02
TVP23B-208ENST00000575261 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
TVP23B-208ENST00000575261 DDB1Q16531 1140 aa14.91□□□□□ -0.02
TVP23B-208ENST00000575261 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
TVP23B-208ENST00000575261 ARHGEF25Q86VW2 580 aa14.91□□□□□ -0.02
TVP23B-208ENST00000575261 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
TVP23B-208ENST00000575261 SOX12O15370 315 aa14.89□□□□□ -0.03
TVP23B-208ENST00000575261 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
TVP23B-208ENST00000575261 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
TVP23B-208ENST00000575261 BCL9O00512 1426 aa14.88□□□□□ -0.03
TVP23B-208ENST00000575261 CARD10Q9BWT7 1032 aa14.87□□□□□ -0.03
TVP23B-208ENST00000575261 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
TVP23B-208ENST00000575261 TNS2Q63HR2 1409 aa14.86□□□□□ -0.03
TVP23B-208ENST00000575261 CARD11Q9BXL7 1154 aa14.86□□□□□ -0.03
TVP23B-208ENST00000575261 CD163L1Q9NR16 1453 aa14.86□□□□□ -0.03
TVP23B-208ENST00000575261 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
TVP23B-208ENST00000575261 LTN1O94822 1766 aa14.85□□□□□ -0.03
TVP23B-208ENST00000575261 PLSCR1O15162 318 aa14.85□□□□□ -0.03
TVP23B-208ENST00000575261 BCL11BQ9C0K0 894 aaPredicted RBP14.85□□□□□ -0.03
TVP23B-208ENST00000575261 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
TVP23B-208ENST00000575261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.84□□□□□ -0.033e-6■■■■□ 22.5
TVP23B-208ENST00000575261 MARCH10Q8NA82 808 aaPredicted RBP14.84□□□□□ -0.03
TVP23B-208ENST00000575261 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.03
TVP23B-208ENST00000575261 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
TVP23B-208ENST00000575261 NHSQ6T4R5 1651 aa14.82□□□□□ -0.04
TVP23B-208ENST00000575261 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
TVP23B-208ENST00000575261 TMC1Q8TDI8 760 aa14.82□□□□□ -0.04
TVP23B-208ENST00000575261 SPON1Q9HCB6 807 aa14.82□□□□□ -0.04
TVP23B-208ENST00000575261 ERBB3P21860 1342 aa14.82□□□□□ -0.04
TVP23B-208ENST00000575261 NME9Q86XW9 330 aa14.81□□□□□ -0.04
TVP23B-208ENST00000575261 ANO8Q9HCE9 1232 aaPredicted RBP14.81□□□□□ -0.04
TVP23B-208ENST00000575261 PPP1R1BQ9UD71 204 aaPredicted RBP14.81□□□□□ -0.04
TVP23B-208ENST00000575261 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
TVP23B-208ENST00000575261 EXOC5O00471 708 aa14.8□□□□□ -0.04
TVP23B-208ENST00000575261 KCNQ2O43526 872 aa14.8□□□□□ -0.04
TVP23B-208ENST00000575261 PTF1AQ7RTS3 328 aa14.8□□□□□ -0.04
TVP23B-208ENST00000575261 NINLQ9Y2I6 1382 aa14.8□□□□□ -0.04
TVP23B-208ENST00000575261 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
TVP23B-208ENST00000575261 FAM208AQ9UK61 1670 aaKnown RBP14.79□□□□□ -0.04
TVP23B-208ENST00000575261 PUS7Q96PZ0 661 aaKnown RBP14.78□□□□□ -0.04
TVP23B-208ENST00000575261 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
TVP23B-208ENST00000575261 NLRP2Q9NX02 1062 aa14.77□□□□□ -0.05
TVP23B-208ENST00000575261 IL2RBP14784 551 aa14.76□□□□□ -0.05
TVP23B-208ENST00000575261 TXNRD1Q16881 649 aa14.76□□□□□ -0.05
TVP23B-208ENST00000575261 PROM2Q8N271 834 aa14.76□□□□□ -0.05
TVP23B-208ENST00000575261 ANKRD24Q8TF21 1146 aa14.76□□□□□ -0.05
TVP23B-208ENST00000575261 UTRNP46939 3433 aa14.76□□□□□ -0.05
TVP23B-208ENST00000575261 MYOM1P52179 1685 aa14.74□□□□□ -0.05
TVP23B-208ENST00000575261 BTAF1O14981 1849 aa14.74□□□□□ -0.05
TVP23B-208ENST00000575261 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
TVP23B-208ENST00000575261 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
TVP23B-208ENST00000575261 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
TVP23B-208ENST00000575261 SLC24A1O60721 1099 aa14.72□□□□□ -0.05
TVP23B-208ENST00000575261 SLC15A2Q16348 729 aa14.72□□□□□ -0.05
TVP23B-208ENST00000575261 ACSBG1Q96GR2 724 aa14.72□□□□□ -0.05
TVP23B-208ENST00000575261 TESK2Q96S53 571 aa14.72□□□□□ -0.05
TVP23B-208ENST00000575261 PDGFDQ9GZP0 370 aaPredicted RBP14.72□□□□□ -0.05
TVP23B-208ENST00000575261 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
TVP23B-208ENST00000575261 ZBTB7AO95365 584 aa14.71□□□□□ -0.05
TVP23B-208ENST00000575261 IP6K1Q92551 441 aa14.71□□□□□ -0.05
TVP23B-208ENST00000575261 ANKRD36BQ8N2N9 1353 aa14.71□□□□□ -0.06
TVP23B-208ENST00000575261 YY1P25490 414 aa14.7□□□□□ -0.06
TVP23B-208ENST00000575261 COG3Q96JB2 828 aa14.7□□□□□ -0.06
TVP23B-208ENST00000575261 PTGER2P43116 358 aa14.68□□□□□ -0.06
TVP23B-208ENST00000575261 LTV1Q96GA3 475 aaPredicted RBP14.68□□□□□ -0.06
TVP23B-208ENST00000575261 MTFR1LQ9H019 292 aa14.68□□□□□ -0.06
TVP23B-208ENST00000575261 DOT1LQ8TEK3 1739 aa14.68□□□□□ -0.06
TVP23B-208ENST00000575261 RTL1A6NKG5 1358 aa14.68□□□□□ -0.06
TVP23B-208ENST00000575261 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
TVP23B-208ENST00000575261 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
TVP23B-208ENST00000575261 SHANK3Q9BYB0 1731 aa14.67□□□□□ -0.06
TVP23B-208ENST00000575261 HOXC9P31274 260 aa14.67□□□□□ -0.06
TVP23B-208ENST00000575261 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
TVP23B-208ENST00000575261 USP47Q96K76 1375 aa14.67□□□□□ -0.06
TVP23B-208ENST00000575261 RGPD2P0DJD1 1756 aa14.66□□□□□ -0.06
TVP23B-208ENST00000575261 AMPHP49418 695 aa14.66□□□□□ -0.06
TVP23B-208ENST00000575261 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
TVP23B-208ENST00000575261 KIF20BQ96Q89 1820 aa14.65□□□□□ -0.06
TVP23B-208ENST00000575261 TMF1P82094 1093 aa14.65□□□□□ -0.06
TVP23B-208ENST00000575261 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
TVP23B-208ENST00000575261 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
TVP23B-208ENST00000575261 MEGF6O75095 1541 aa14.65□□□□□ -0.06
TVP23B-208ENST00000575261 SMG6Q86US8 1419 aaKnown RBP14.65□□□□□ -0.06
TVP23B-208ENST00000575261 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
TVP23B-208ENST00000575261 SLC27A3Q5K4L6 730 aa14.63□□□□□ -0.07
TVP23B-208ENST00000575261 SGIP1Q9BQI5 828 aa14.63□□□□□ -0.07
TVP23B-208ENST00000575261 LY75O60449 1722 aa14.62□□□□□ -0.07
TVP23B-208ENST00000575261 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
TVP23B-208ENST00000575261 FHDC1Q9C0D6 1143 aaPredicted RBP14.62□□□□□ -0.07
TVP23B-208ENST00000575261 LRRC4BQ9NT99 713 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms