RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RREB1Q92766 1687 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 NLRP6P59044 892 aa12.21□□□□□ -0.45
SMG6-216ENST00000575176 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
SMG6-216ENST00000575176 CRB1P82279 1406 aa12.2□□□□□ -0.46
SMG6-216ENST00000575176 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
SMG6-216ENST00000575176 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
SMG6-216ENST00000575176 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMG6-216ENST00000575176 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
SMG6-216ENST00000575176 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
SMG6-216ENST00000575176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMG6-216ENST00000575176 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
SMG6-216ENST00000575176 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
SMG6-216ENST00000575176 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMG6-216ENST00000575176 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
SMG6-216ENST00000575176 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
SMG6-216ENST00000575176 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
SMG6-216ENST00000575176 NCAPD2Q15021 1401 aa12.18□□□□□ -0.46
SMG6-216ENST00000575176 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
SMG6-216ENST00000575176 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
SMG6-216ENST00000575176 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
SMG6-216ENST00000575176 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 ERBB3P21860 1342 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 KIF7Q2M1P5 1343 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 FYB1O15117 783 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
SMG6-216ENST00000575176 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
SMG6-216ENST00000575176 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
SMG6-216ENST00000575176 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
SMG6-216ENST00000575176 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
SMG6-216ENST00000575176 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
SMG6-216ENST00000575176 FBLN1P23142 703 aa12.14□□□□□ -0.47
SMG6-216ENST00000575176 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
SMG6-216ENST00000575176 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
SMG6-216ENST00000575176 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
SMG6-216ENST00000575176 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
SMG6-216ENST00000575176 MEGF6O75095 1541 aa12.12□□□□□ -0.47
SMG6-216ENST00000575176 SOX12O15370 315 aa12.12□□□□□ -0.47
SMG6-216ENST00000575176 GGNBP2Q9H3C7 697 aa12.12□□□□□ -0.47
SMG6-216ENST00000575176 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
SMG6-216ENST00000575176 BCL9O00512 1426 aa12.11□□□□□ -0.47
SMG6-216ENST00000575176 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
SMG6-216ENST00000575176 KIF24Q5T7B8 1368 aa12.1□□□□□ -0.47
SMG6-216ENST00000575176 BTAF1O14981 1849 aa12.1□□□□□ -0.47
SMG6-216ENST00000575176 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
SMG6-216ENST00000575176 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
SMG6-216ENST00000575176 HOXC9P31274 260 aa12.09□□□□□ -0.47
SMG6-216ENST00000575176 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
SMG6-216ENST00000575176 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
SMG6-216ENST00000575176 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
SMG6-216ENST00000575176 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
SMG6-216ENST00000575176 NSD2O96028 1365 aa12.08□□□□□ -0.48
SMG6-216ENST00000575176 FLT4P35916 1363 aa12.08□□□□□ -0.48
SMG6-216ENST00000575176 RRS1Q15050 365 aaKnown RBP12.08□□□□□ -0.48
SMG6-216ENST00000575176 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
SMG6-216ENST00000575176 IP6K1Q92551 441 aa12.08□□□□□ -0.48
SMG6-216ENST00000575176 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SMG6-216ENST00000575176 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
SMG6-216ENST00000575176 INSRP06213 1382 aa12.07□□□□□ -0.48
SMG6-216ENST00000575176 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
SMG6-216ENST00000575176 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
SMG6-216ENST00000575176 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
SMG6-216ENST00000575176 LY75O60449 1722 aa12.07□□□□□ -0.48
SMG6-216ENST00000575176 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
SMG6-216ENST00000575176 ZBTB7CA1YPR0 619 aa12.06□□□□□ -0.48
SMG6-216ENST00000575176 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
SMG6-216ENST00000575176 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
SMG6-216ENST00000575176 PANK3Q9H999 370 aa12.06□□□□□ -0.48
SMG6-216ENST00000575176 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
SMG6-216ENST00000575176 ITGB4P16144 1822 aa12.06□□□□□ -0.48
SMG6-216ENST00000575176 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
SMG6-216ENST00000575176 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
SMG6-216ENST00000575176 TOM1L2Q6ZVM7 507 aa12.04□□□□□ -0.48
SMG6-216ENST00000575176 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
SMG6-216ENST00000575176 CASZ1Q86V15 1759 aa12.03□□□□□ -0.48
SMG6-216ENST00000575176 EVA1CP58658 441 aa12.03□□□□□ -0.48
SMG6-216ENST00000575176 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
SMG6-216ENST00000575176 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
SMG6-216ENST00000575176 HSP90AB2PQ58FF8 381 aa12.02□□□□□ -0.49
SMG6-216ENST00000575176 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
SMG6-216ENST00000575176 LRP5O75197 1615 aa12.01□□□□□ -0.49
SMG6-216ENST00000575176 QSER1Q2KHR3 1735 aa12.01□□□□□ -0.49
SMG6-216ENST00000575176 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
SMG6-216ENST00000575176 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
SMG6-216ENST00000575176 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
SMG6-216ENST00000575176 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
SMG6-216ENST00000575176 CCDC125Q86Z20 511 aa12□□□□□ -0.49
SMG6-216ENST00000575176 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
SMG6-216ENST00000575176 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
SMG6-216ENST00000575176 A0A0G2JS52 829 aa11.99□□□□□ -0.49
SMG6-216ENST00000575176 MYT1Q01538 1121 aa11.99□□□□□ -0.49
SMG6-216ENST00000575176 CDCA7Q9BWT1 371 aaPredicted RBP11.99□□□□□ -0.49
SMG6-216ENST00000575176 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
SMG6-216ENST00000575176 COL24A1Q17RW2 1714 aa11.98□□□□□ -0.49
SMG6-216ENST00000575176 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
SMG6-216ENST00000575176 DDB1Q16531 1140 aa11.98□□□□□ -0.49
SMG6-216ENST00000575176 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
SMG6-216ENST00000575176 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms