RNA–Protein interactions for RNA: ENST00000574822.6

CACNA1A-204, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-204ENST00000574822 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
CACNA1A-204ENST00000574822 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
CACNA1A-204ENST00000574822 PEAK1Q9H792 1746 aa16.38■□□□□ 0.21
CACNA1A-204ENST00000574822 FBLN1P23142 703 aa16.37■□□□□ 0.21
CACNA1A-204ENST00000574822 MTHFSP49914 203 aa16.37■□□□□ 0.21
CACNA1A-204ENST00000574822 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
CACNA1A-204ENST00000574822 IP6K1Q92551 441 aa16.37■□□□□ 0.21
CACNA1A-204ENST00000574822 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
CACNA1A-204ENST00000574822 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-204ENST00000574822 COL18A1P39060 1754 aa16.36■□□□□ 0.21
CACNA1A-204ENST00000574822 HOXC9P31274 260 aa16.36■□□□□ 0.21
CACNA1A-204ENST00000574822 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
CACNA1A-204ENST00000574822 INSRP06213 1382 aa16.36■□□□□ 0.21
CACNA1A-204ENST00000574822 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
CACNA1A-204ENST00000574822 FAM83GA6ND36 823 aa16.35■□□□□ 0.21
CACNA1A-204ENST00000574822 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.21
CACNA1A-204ENST00000574822 EVA1CP58658 441 aa16.33■□□□□ 0.2
CACNA1A-204ENST00000574822 BTG4Q9NY30 223 aa16.33■□□□□ 0.2
CACNA1A-204ENST00000574822 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
CACNA1A-204ENST00000574822 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.2
CACNA1A-204ENST00000574822 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
CACNA1A-204ENST00000574822 SLIT2O94813 1529 aa16.32■□□□□ 0.2
CACNA1A-204ENST00000574822 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
CACNA1A-204ENST00000574822 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
CACNA1A-204ENST00000574822 ERBB3P21860 1342 aa16.3■□□□□ 0.2
CACNA1A-204ENST00000574822 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-204ENST00000574822 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
CACNA1A-204ENST00000574822 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-204ENST00000574822 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
CACNA1A-204ENST00000574822 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
CACNA1A-204ENST00000574822 AFF2P51816 1311 aa16.29■□□□□ 0.2
CACNA1A-204ENST00000574822 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
CACNA1A-204ENST00000574822 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-204ENST00000574822 USP21Q9UK80 565 aa16.29■□□□□ 0.2
CACNA1A-204ENST00000574822 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
CACNA1A-204ENST00000574822 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-204ENST00000574822 UNC5CLQ8IV45 518 aa16.28■□□□□ 0.2
CACNA1A-204ENST00000574822 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-204ENST00000574822 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
CACNA1A-204ENST00000574822 CRB1P82279 1406 aa16.28■□□□□ 0.2
CACNA1A-204ENST00000574822 CCER2I3L3R5 266 aa16.27■□□□□ 0.2
CACNA1A-204ENST00000574822 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-204ENST00000574822 ZNF772Q68DY9 489 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-204ENST00000574822 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
CACNA1A-204ENST00000574822 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1A-204ENST00000574822 MIER1Q8N108 512 aa16.26■□□□□ 0.19
CACNA1A-204ENST00000574822 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
CACNA1A-204ENST00000574822 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-204ENST00000574822 BCL9LQ86UU0 1499 aa16.26■□□□□ 0.19
CACNA1A-204ENST00000574822 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-204ENST00000574822 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
CACNA1A-204ENST00000574822 RGPD2P0DJD1 1756 aa16.24■□□□□ 0.19
CACNA1A-204ENST00000574822 IL13P35225 146 aa16.24■□□□□ 0.19
CACNA1A-204ENST00000574822 TRPC5Q9UL62 973 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-204ENST00000574822 VPS72Q15906 364 aa16.23■□□□□ 0.19
CACNA1A-204ENST00000574822 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-204ENST00000574822 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
CACNA1A-204ENST00000574822 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
CACNA1A-204ENST00000574822 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-204ENST00000574822 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNA1A-204ENST00000574822 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-204ENST00000574822 WNK3Q9BYP7 1800 aa16.21■□□□□ 0.19
CACNA1A-204ENST00000574822 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 ATRNO75882 1429 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 PARP4Q9UKK3 1724 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 NEFMP07197 916 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 NBPF6Q5VWK0 638 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 NBPF4Q96M43 638 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 EYA1Q99502 592 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 USP35Q9P2H5 1018 aa16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-204ENST00000574822 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
CACNA1A-204ENST00000574822 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
CACNA1A-204ENST00000574822 TCP11L2Q8N4U5 519 aa16.19■□□□□ 0.18
CACNA1A-204ENST00000574822 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
CACNA1A-204ENST00000574822 KDRP35968 1356 aa16.18■□□□□ 0.18
CACNA1A-204ENST00000574822 CCDC184Q52MB2 194 aa16.18■□□□□ 0.18
CACNA1A-204ENST00000574822 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
CACNA1A-204ENST00000574822 USHBP1Q8N6Y0 703 aa16.18■□□□□ 0.18
CACNA1A-204ENST00000574822 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-204ENST00000574822 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-204ENST00000574822 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
CACNA1A-204ENST00000574822 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-204ENST00000574822 FCHSD2O94868 740 aa16.16■□□□□ 0.18
CACNA1A-204ENST00000574822 HMOX1P09601 288 aa16.16■□□□□ 0.18
CACNA1A-204ENST00000574822 IL2RBP14784 551 aa16.16■□□□□ 0.18
CACNA1A-204ENST00000574822 TATP17735 454 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-204ENST00000574822 GLI3P10071 1580 aa16.16■□□□□ 0.18
CACNA1A-204ENST00000574822 A0A0G2JS52 829 aa16.15■□□□□ 0.18
CACNA1A-204ENST00000574822 MYT1Q01538 1121 aa16.15■□□□□ 0.18
CACNA1A-204ENST00000574822 BARGINQ6ZT62 677 aa16.15■□□□□ 0.18
CACNA1A-204ENST00000574822 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-204ENST00000574822 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
CACNA1A-204ENST00000574822 RBM6P78332 1123 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-204ENST00000574822 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
CACNA1A-204ENST00000574822 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.17
CACNA1A-204ENST00000574822 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
CACNA1A-204ENST00000574822 ADAMTS8Q9UP79 889 aa16.13■□□□□ 0.17
CACNA1A-204ENST00000574822 MEGF6O75095 1541 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms