RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 USTQ9Y2C2 406 aa9.13□□□□□ -0.95
TOM1L1-218ENST00000574653 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
TOM1L1-218ENST00000574653 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
TOM1L1-218ENST00000574653 CDCA8Q53HL2 280 aa9.12□□□□□ -0.95
TOM1L1-218ENST00000574653 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
TOM1L1-218ENST00000574653 DZIP3Q86Y13 1208 aaKnown RBP9.11□□□□□ -0.95
TOM1L1-218ENST00000574653 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
TOM1L1-218ENST00000574653 PLPP7Q8NBV4 271 aa9.11□□□□□ -0.95
TOM1L1-218ENST00000574653 VRTNQ9H8Y1 702 aa9.11□□□□□ -0.95
TOM1L1-218ENST00000574653 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
TOM1L1-218ENST00000574653 ELOAQ14241 798 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-218ENST00000574653 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
TOM1L1-218ENST00000574653 TMEM88BA6NKF7 163 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 PDE4CQ08493 712 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 TRIM32Q13049 653 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 NCOA4Q13772 614 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 MAP7D1Q3KQU3 841 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 DEPDC4Q8N2C3 294 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 PODXL2Q9NZ53 605 aa9.09□□□□□ -0.95
TOM1L1-218ENST00000574653 ESPNB1AK53 854 aa9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 LZTS3O60299 673 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 SKOR1P84550 965 aa9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 AGERQ15109 404 aa9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 TSGA10IPQ3SY00 556 aa9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 KCTD17Q8N5Z5 321 aa9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 CCDC85AQ96PX6 553 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 ZMIZ1Q9ULJ6 1067 aa9.08□□□□□ -0.96
TOM1L1-218ENST00000574653 GGCXP38435 758 aa9.07□□□□□ -0.96
TOM1L1-218ENST00000574653 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
TOM1L1-218ENST00000574653 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-218ENST00000574653 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 FAM196BA6NMK8 535 aa9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 ZBTB24O43167 697 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 RPIAP49247 311 aa9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 WNT7BP56706 349 aa9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 CRTC2Q53ET0 693 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.06□□□□□ -0.96
TOM1L1-218ENST00000574653 ZBTB7CA1YPR0 619 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L10C9JJH3 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L12C9JPN9 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L21D6R901 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 EMID1Q96A84 441 aaPredicted RBP9.05□□□□□ -0.96
TOM1L1-218ENST00000574653 PTK7Q13308 1070 aa9.04□□□□□ -0.96
TOM1L1-218ENST00000574653 EML3Q32P44 896 aa9.04□□□□□ -0.96
TOM1L1-218ENST00000574653 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
TOM1L1-218ENST00000574653 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
TOM1L1-218ENST00000574653 CDV3Q9UKY7 258 aaKnown RBP9.04□□□□□ -0.96
TOM1L1-218ENST00000574653 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 TMEM164Q5U3C3 297 aa9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 RNF20Q5VTR2 975 aa9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 SEPT12Q8IYM1 358 aa9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 NOVA2Q9UNW9 492 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 DOLKQ9UPQ8 538 aa9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 MAP4K5Q9Y4K4 846 aa9.03□□□□□ -0.96
TOM1L1-218ENST00000574653 AEBP1Q8IUX7 1158 aa9.02□□□□□ -0.97
TOM1L1-218ENST00000574653 DKK1O94907 266 aa9.01□□□□□ -0.97
TOM1L1-218ENST00000574653 BRD1O95696 1058 aa9.01□□□□□ -0.97
TOM1L1-218ENST00000574653 RASA1P20936 1047 aa9.01□□□□□ -0.97
TOM1L1-218ENST00000574653 CLDN10P78369 228 aa9.01□□□□□ -0.97
TOM1L1-218ENST00000574653 LIAT1Q6ZQX7 453 aa9.01□□□□□ -0.97
TOM1L1-218ENST00000574653 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
TOM1L1-218ENST00000574653 CCDC125Q86Z20 511 aa9□□□□□ -0.97
TOM1L1-218ENST00000574653 ZNF775Q96BV0 537 aaPredicted RBP9□□□□□ -0.97
TOM1L1-218ENST00000574653 KCTD15Q96SI1 283 aaPredicted RBP9□□□□□ -0.97
TOM1L1-218ENST00000574653 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
TOM1L1-218ENST00000574653 NOD1Q9Y239 953 aa9□□□□□ -0.97
TOM1L1-218ENST00000574653 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
TOM1L1-218ENST00000574653 OXLD1Q5BKU9 147 aa8.99□□□□□ -0.97
TOM1L1-218ENST00000574653 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
TOM1L1-218ENST00000574653 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
TOM1L1-218ENST00000574653 OGFOD1Q8N543 542 aa8.99□□□□□ -0.97
TOM1L1-218ENST00000574653 CDK15Q96Q40 435 aa8.99□□□□□ -0.97
TOM1L1-218ENST00000574653 ZBTB7BO15156 539 aaPredicted RBP8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 KCNA1Q09470 495 aa8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 INTS6LQ5JSJ4 861 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 RC3H1Q5TC82 1133 aaKnown RBP8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 PCDHB11Q9Y5F2 797 aa8.98□□□□□ -0.97
TOM1L1-218ENST00000574653 CD2BP2O95400 341 aaKnown RBP8.97□□□□□ -0.97
TOM1L1-218ENST00000574653 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
TOM1L1-218ENST00000574653 SIX5Q8N196 739 aa8.97□□□□□ -0.97
TOM1L1-218ENST00000574653 LARGE2Q8N3Y3 721 aa8.97□□□□□ -0.97
TOM1L1-218ENST00000574653 MPNDQ8N594 471 aa8.97□□□□□ -0.97
TOM1L1-218ENST00000574653 EHBP1Q8NDI1 1231 aa8.97□□□□□ -0.97
TOM1L1-218ENST00000574653 DNAAF2Q9NVR5 837 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms