RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
TOM1L1-218ENST00000574653 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
TOM1L1-218ENST00000574653 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
TOM1L1-218ENST00000574653 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
TOM1L1-218ENST00000574653 FOXD1Q16676 465 aa19.21■□□□□ 0.67
TOM1L1-218ENST00000574653 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
TOM1L1-218ENST00000574653 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
TOM1L1-218ENST00000574653 MSH5O43196 834 aa18.11■□□□□ 0.49
TOM1L1-218ENST00000574653 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
TOM1L1-218ENST00000574653 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
TOM1L1-218ENST00000574653 ADRA2BP18089 450 aa17.58■□□□□ 0.4
TOM1L1-218ENST00000574653 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-218ENST00000574653 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
TOM1L1-218ENST00000574653 KCNA4P22459 653 aa16.21■□□□□ 0.19
TOM1L1-218ENST00000574653 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
TOM1L1-218ENST00000574653 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
TOM1L1-218ENST00000574653 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
TOM1L1-218ENST00000574653 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
TOM1L1-218ENST00000574653 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
TOM1L1-218ENST00000574653 HOXD11P31277 338 aaPredicted RBP15.54■□□□□ 0.08
TOM1L1-218ENST00000574653 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
TOM1L1-218ENST00000574653 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
TOM1L1-218ENST00000574653 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
TOM1L1-218ENST00000574653 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
TOM1L1-218ENST00000574653 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
TOM1L1-218ENST00000574653 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
TOM1L1-218ENST00000574653 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
TOM1L1-218ENST00000574653 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
TOM1L1-218ENST00000574653 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
TOM1L1-218ENST00000574653 ZBTB22O15209 634 aa14.97□□□□□ -0.01
TOM1L1-218ENST00000574653 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
TOM1L1-218ENST00000574653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
TOM1L1-218ENST00000574653 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
TOM1L1-218ENST00000574653 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
TOM1L1-218ENST00000574653 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
TOM1L1-218ENST00000574653 DSG3P32926 999 aa14.33□□□□□ -0.12
TOM1L1-218ENST00000574653 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
TOM1L1-218ENST00000574653 POTEHQ6S545 545 aa14.27□□□□□ -0.13
TOM1L1-218ENST00000574653 CAPN15O75808 1086 aa14.26□□□□□ -0.13
TOM1L1-218ENST00000574653 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
TOM1L1-218ENST00000574653 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
TOM1L1-218ENST00000574653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
TOM1L1-218ENST00000574653 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
TOM1L1-218ENST00000574653 APLP2Q06481 763 aa13.95□□□□□ -0.18
TOM1L1-218ENST00000574653 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
TOM1L1-218ENST00000574653 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
TOM1L1-218ENST00000574653 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
TOM1L1-218ENST00000574653 ABCB7O75027 752 aa13.9□□□□□ -0.18
TOM1L1-218ENST00000574653 FKBP8Q14318 412 aa13.68□□□□□ -0.22
TOM1L1-218ENST00000574653 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
TOM1L1-218ENST00000574653 POLA2Q14181 598 aa13.52□□□□□ -0.25
TOM1L1-218ENST00000574653 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
TOM1L1-218ENST00000574653 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
TOM1L1-218ENST00000574653 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
TOM1L1-218ENST00000574653 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-218ENST00000574653 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
TOM1L1-218ENST00000574653 FBLN2P98095 1184 aa13.25□□□□□ -0.29
TOM1L1-218ENST00000574653 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
TOM1L1-218ENST00000574653 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
TOM1L1-218ENST00000574653 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
TOM1L1-218ENST00000574653 PROM2Q8N271 834 aa13.19□□□□□ -0.3
TOM1L1-218ENST00000574653 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
TOM1L1-218ENST00000574653 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
TOM1L1-218ENST00000574653 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
TOM1L1-218ENST00000574653 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
TOM1L1-218ENST00000574653 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
TOM1L1-218ENST00000574653 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOM1L1-218ENST00000574653 HAX1O00165 279 aa12.94□□□□□ -0.34
TOM1L1-218ENST00000574653 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
TOM1L1-218ENST00000574653 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
TOM1L1-218ENST00000574653 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
TOM1L1-218ENST00000574653 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
TOM1L1-218ENST00000574653 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
TOM1L1-218ENST00000574653 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
TOM1L1-218ENST00000574653 EVX2Q03828 476 aa12.8□□□□□ -0.36
TOM1L1-218ENST00000574653 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
TOM1L1-218ENST00000574653 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
TOM1L1-218ENST00000574653 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOM1L1-218ENST00000574653 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
TOM1L1-218ENST00000574653 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
TOM1L1-218ENST00000574653 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
TOM1L1-218ENST00000574653 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
TOM1L1-218ENST00000574653 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
TOM1L1-218ENST00000574653 PKD2Q13563 968 aa12.54□□□□□ -0.4
TOM1L1-218ENST00000574653 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
TOM1L1-218ENST00000574653 GABBR2O75899 941 aa12.49□□□□□ -0.41
TOM1L1-218ENST00000574653 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
TOM1L1-218ENST00000574653 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
TOM1L1-218ENST00000574653 MIER1Q8N108 512 aa12.46□□□□□ -0.41
TOM1L1-218ENST00000574653 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
TOM1L1-218ENST00000574653 LHX8Q68G74 356 aa12.38□□□□□ -0.43
TOM1L1-218ENST00000574653 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
TOM1L1-218ENST00000574653 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
TOM1L1-218ENST00000574653 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
TOM1L1-218ENST00000574653 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
TOM1L1-218ENST00000574653 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
TOM1L1-218ENST00000574653 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
TOM1L1-218ENST00000574653 POTEIP0CG38 1075 aa12.24□□□□□ -0.45
TOM1L1-218ENST00000574653 RGL2O15211 777 aa12.23□□□□□ -0.45
TOM1L1-218ENST00000574653 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms