RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 MAP3K19Q56UN5 1328 aa18.03■□□□□ 0.48
TRAP1-208ENST00000573872 RGPD5Q99666 1765 aa18.03■□□□□ 0.48
TRAP1-208ENST00000573872 GLI3P10071 1580 aa18.02■□□□□ 0.48
TRAP1-208ENST00000573872 ZBTB7CA1YPR0 619 aa18.01■□□□□ 0.47
TRAP1-208ENST00000573872 RBM6P78332 1123 aaKnown RBP18.01■□□□□ 0.47
TRAP1-208ENST00000573872 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
TRAP1-208ENST00000573872 GJD4Q96KN9 370 aaPredicted RBP18.01■□□□□ 0.47
TRAP1-208ENST00000573872 RTL1A6NKG5 1358 aa18.01■□□□□ 0.47
TRAP1-208ENST00000573872 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
TRAP1-208ENST00000573872 BLMP54132 1417 aaPredicted RBP18■□□□□ 0.47
TRAP1-208ENST00000573872 IP6K1Q92551 441 aa18■□□□□ 0.47
TRAP1-208ENST00000573872 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
TRAP1-208ENST00000573872 RXRBP28702 533 aa17.99■□□□□ 0.47
TRAP1-208ENST00000573872 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
TRAP1-208ENST00000573872 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
TRAP1-208ENST00000573872 CDK12Q9NYV4 1490 aaPredicted RBP17.99■□□□□ 0.47
TRAP1-208ENST00000573872 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
TRAP1-208ENST00000573872 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
TRAP1-208ENST00000573872 HOXC9P31274 260 aa17.98■□□□□ 0.47
TRAP1-208ENST00000573872 LARP1Q6PKG0 1096 aaKnown RBP17.98■□□□□ 0.47
TRAP1-208ENST00000573872 ILDR2Q71H61 639 aa17.98■□□□□ 0.47
TRAP1-208ENST00000573872 SMG6Q86US8 1419 aaKnown RBP17.98■□□□□ 0.47
TRAP1-208ENST00000573872 ERBB3P21860 1342 aa17.98■□□□□ 0.47
TRAP1-208ENST00000573872 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
TRAP1-208ENST00000573872 ZNF316A6NFI3 1004 aaPredicted RBP17.97■□□□□ 0.47
TRAP1-208ENST00000573872 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
TRAP1-208ENST00000573872 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
TRAP1-208ENST00000573872 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
TRAP1-208ENST00000573872 CRB1P82279 1406 aa17.97■□□□□ 0.47
TRAP1-208ENST00000573872 SPATA31A1Q5TZJ5 1347 aa17.97■□□□□ 0.47
TRAP1-208ENST00000573872 FLT4P35916 1363 aa17.96■□□□□ 0.47
TRAP1-208ENST00000573872 AMPHP49418 695 aa17.96■□□□□ 0.47
TRAP1-208ENST00000573872 EVA1CP58658 441 aa17.96■□□□□ 0.47
TRAP1-208ENST00000573872 DDX10Q13206 875 aaKnown RBP17.96■□□□□ 0.47
TRAP1-208ENST00000573872 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
TRAP1-208ENST00000573872 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
TRAP1-208ENST00000573872 RGS12O14924 1447 aa17.95■□□□□ 0.46
TRAP1-208ENST00000573872 INSRP06213 1382 aa17.94■□□□□ 0.46
TRAP1-208ENST00000573872 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
TRAP1-208ENST00000573872 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
TRAP1-208ENST00000573872 ANKRD24Q8TF21 1146 aa17.93■□□□□ 0.46
TRAP1-208ENST00000573872 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
TRAP1-208ENST00000573872 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
TRAP1-208ENST00000573872 THSD7AQ9UPZ6 1657 aa17.92■□□□□ 0.46
TRAP1-208ENST00000573872 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
TRAP1-208ENST00000573872 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
TRAP1-208ENST00000573872 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
TRAP1-208ENST00000573872 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
TRAP1-208ENST00000573872 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
TRAP1-208ENST00000573872 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.45
TRAP1-208ENST00000573872 FAM98CQ17RN3 349 aaKnown RBP17.89■□□□□ 0.45
TRAP1-208ENST00000573872 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
TRAP1-208ENST00000573872 PARD3Q8TEW0 1356 aa17.89■□□□□ 0.45
TRAP1-208ENST00000573872 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
TRAP1-208ENST00000573872 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
TRAP1-208ENST00000573872 RGPD2P0DJD1 1756 aa17.88■□□□□ 0.45
TRAP1-208ENST00000573872 DISP2A7MBM2 1401 aa17.88■□□□□ 0.45
TRAP1-208ENST00000573872 SEPT12Q8IYM1 358 aa17.87■□□□□ 0.45
TRAP1-208ENST00000573872 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
TRAP1-208ENST00000573872 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
TRAP1-208ENST00000573872 NLRP2Q9NX02 1062 aa17.86■□□□□ 0.45
TRAP1-208ENST00000573872 NCAPD2Q15021 1401 aa17.86■□□□□ 0.45
TRAP1-208ENST00000573872 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
TRAP1-208ENST00000573872 BRWD3Q6RI45 1802 aa17.86■□□□□ 0.45
TRAP1-208ENST00000573872 MTHFSP49914 203 aa17.85■□□□□ 0.45
TRAP1-208ENST00000573872 NBPF6Q5VWK0 638 aa17.85■□□□□ 0.45
TRAP1-208ENST00000573872 NBPF4Q96M43 638 aa17.85■□□□□ 0.45
TRAP1-208ENST00000573872 EIF4A2Q14240 407 aaKnown RBP17.84■□□□□ 0.45
TRAP1-208ENST00000573872 PPP2R1AP30153 589 aa17.83■□□□□ 0.44
TRAP1-208ENST00000573872 LRRC37A3O60309 1634 aa17.83■□□□□ 0.44
TRAP1-208ENST00000573872 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
TRAP1-208ENST00000573872 EYA1Q99502 592 aa17.81■□□□□ 0.44
TRAP1-208ENST00000573872 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
TRAP1-208ENST00000573872 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
TRAP1-208ENST00000573872 IL13P35225 146 aa17.8■□□□□ 0.44
TRAP1-208ENST00000573872 RALBP1Q15311 655 aa17.8■□□□□ 0.44
TRAP1-208ENST00000573872 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
TRAP1-208ENST00000573872 MEGF6O75095 1541 aa17.79■□□□□ 0.44
TRAP1-208ENST00000573872 IL2RBP14784 551 aa17.79■□□□□ 0.44
TRAP1-208ENST00000573872 USHBP1Q8N6Y0 703 aa17.79■□□□□ 0.44
TRAP1-208ENST00000573872 A0A0G2JS52 829 aa17.78■□□□□ 0.44
TRAP1-208ENST00000573872 MYT1Q01538 1121 aa17.78■□□□□ 0.44
TRAP1-208ENST00000573872 KRT27Q7Z3Y8 459 aa17.78■□□□□ 0.44
TRAP1-208ENST00000573872 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
TRAP1-208ENST00000573872 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
TRAP1-208ENST00000573872 EP400Q96L91 3159 aa17.76■□□□□ 0.43
TRAP1-208ENST00000573872 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
TRAP1-208ENST00000573872 DDB1Q16531 1140 aa17.76■□□□□ 0.43
TRAP1-208ENST00000573872 KDRP35968 1356 aa17.75■□□□□ 0.43
TRAP1-208ENST00000573872 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
TRAP1-208ENST00000573872 SHANK3Q9BYB0 1731 aa17.74■□□□□ 0.43
TRAP1-208ENST00000573872 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
TRAP1-208ENST00000573872 EXOC5O00471 708 aa17.73■□□□□ 0.43
TRAP1-208ENST00000573872 PLEKHG2Q9H7P9 1386 aa17.73■□□□□ 0.43
TRAP1-208ENST00000573872 PDE3BQ13370 1112 aa17.72■□□□□ 0.43
TRAP1-208ENST00000573872 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
TRAP1-208ENST00000573872 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
TRAP1-208ENST00000573872 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
TRAP1-208ENST00000573872 BCL9O00512 1426 aa17.72■□□□□ 0.43
TRAP1-208ENST00000573872 SOCS7O14512 581 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms