RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 THSD7AQ9UPZ6 1657 aa38.62■■■■□ 3.77
SCARF1-207ENST00000573867 C11orf95C9JLR9 678 aaPredicted RBP38.61■■■■□ 3.77
SCARF1-207ENST00000573867 POLR3GLQ9BT43 218 aa38.6■■■■□ 3.77
SCARF1-207ENST00000573867 RGPD5Q99666 1765 aa38.57■■■■□ 3.77
SCARF1-207ENST00000573867 FYB1O15117 783 aa38.57■■■■□ 3.76
SCARF1-207ENST00000573867 USP35Q9P2H5 1018 aa38.57■■■■□ 3.76
SCARF1-207ENST00000573867 NSD3Q9BZ95 1437 aa38.55■■■■□ 3.76
SCARF1-207ENST00000573867 A0A0G2JS52 829 aa38.55■■■■□ 3.76
SCARF1-207ENST00000573867 MYT1Q01538 1121 aa38.55■■■■□ 3.76
SCARF1-207ENST00000573867 ABCC6O95255 1503 aa38.54■■■■□ 3.76
SCARF1-207ENST00000573867 GGNBP2Q9H3C7 697 aa38.54■■■■□ 3.76
SCARF1-207ENST00000573867 LTN1O94822 1766 aa38.54■■■■□ 3.76
SCARF1-207ENST00000573867 COG3Q96JB2 828 aa38.53■■■■□ 3.76
SCARF1-207ENST00000573867 CRB1P82279 1406 aa38.53■■■■□ 3.76
SCARF1-207ENST00000573867 KIF20BQ96Q89 1820 aa38.5■■■■□ 3.75
SCARF1-207ENST00000573867 FBLN1P23142 703 aa38.5■■■■□ 3.75
SCARF1-207ENST00000573867 KRT27Q7Z3Y8 459 aa38.5■■■■□ 3.75
SCARF1-207ENST00000573867 WDR17Q8IZU2 1322 aa38.49■■■■□ 3.75
SCARF1-207ENST00000573867 BARGINQ6ZT62 677 aa38.49■■■■□ 3.75
SCARF1-207ENST00000573867 TCP11L2Q8N4U5 519 aa38.49■■■■□ 3.75
SCARF1-207ENST00000573867 TOM1L2Q6ZVM7 507 aa38.44■■■■□ 3.74
SCARF1-207ENST00000573867 THRAP3Q9Y2W1 955 aaKnown RBP38.43■■■■□ 3.74
SCARF1-207ENST00000573867 MAP3K19Q56UN5 1328 aa38.42■■■■□ 3.74
SCARF1-207ENST00000573867 KIF7Q2M1P5 1343 aa38.4■■■■□ 3.74
SCARF1-207ENST00000573867 FAM182BQ5T319 152 aa38.4■■■■□ 3.74
SCARF1-207ENST00000573867 ERBB3P21860 1342 aa38.39■■■■□ 3.74
SCARF1-207ENST00000573867 PANK3Q9H999 370 aa38.39■■■■□ 3.74
SCARF1-207ENST00000573867 CSB-PGBD3P0DP91 1061 aa38.38■■■■□ 3.73
SCARF1-207ENST00000573867 IP6K1Q92551 441 aa38.37■■■■□ 3.73
SCARF1-207ENST00000573867 PARP4Q9UKK3 1724 aaKnown RBP38.36■■■■□ 3.73
SCARF1-207ENST00000573867 RRS1Q15050 365 aaKnown RBP38.36■■■■□ 3.73
SCARF1-207ENST00000573867 CARD10Q9BWT7 1032 aa38.36■■■■□ 3.73
SCARF1-207ENST00000573867 BLMP54132 1417 aaPredicted RBP38.35■■■■□ 3.73
SCARF1-207ENST00000573867 WNK3Q9BYP7 1800 aa38.35■■■■□ 3.73
SCARF1-207ENST00000573867 ANKRD24Q8TF21 1146 aa38.34■■■■□ 3.73
SCARF1-207ENST00000573867 CGNL1Q0VF96 1302 aa38.33■■■■□ 3.73
SCARF1-207ENST00000573867 HOXC9P31274 260 aa38.32■■■■□ 3.72
SCARF1-207ENST00000573867 LRRC37A3O60309 1634 aa38.31■■■■□ 3.72
SCARF1-207ENST00000573867 DISP2A7MBM2 1401 aa38.31■■■■□ 3.72
SCARF1-207ENST00000573867 PEAK1Q9H792 1746 aa38.29■■■■□ 3.72
SCARF1-207ENST00000573867 AMPHP49418 695 aa38.28■■■■□ 3.72
SCARF1-207ENST00000573867 RTL1A6NKG5 1358 aa38.27■■■■□ 3.72
SCARF1-207ENST00000573867 CCDC7Q96M83 1385 aa38.27■■■■□ 3.72
SCARF1-207ENST00000573867 CCDC125Q86Z20 511 aa38.26■■■■□ 3.72
SCARF1-207ENST00000573867 NLRP2Q9NX02 1062 aa38.26■■■■□ 3.72
SCARF1-207ENST00000573867 LTV1Q96GA3 475 aaPredicted RBP38.25■■■■□ 3.71
SCARF1-207ENST00000573867 PDE3BQ13370 1112 aa38.24■■■■□ 3.71
SCARF1-207ENST00000573867 ANKRD26Q9UPS8 1709 aa38.24■■■■□ 3.71
SCARF1-207ENST00000573867 WASHC2AQ641Q2 1341 aa38.21■■■■□ 3.71
SCARF1-207ENST00000573867 EMILIN1Q9Y6C2 1016 aa38.21■■■■□ 3.71
SCARF1-207ENST00000573867 DDB1Q16531 1140 aa38.19■■■■□ 3.7
SCARF1-207ENST00000573867 FAM208AQ9UK61 1670 aaKnown RBP38.19■■■■□ 3.7
SCARF1-207ENST00000573867 CDCA7Q9BWT1 371 aaPredicted RBP38.18■■■■□ 3.7
SCARF1-207ENST00000573867 HSP90AB2PQ58FF8 381 aa38.17■■■■□ 3.7
SCARF1-207ENST00000573867 FAM196AQ6ZSG2 479 aa38.17■■■■□ 3.7
SCARF1-207ENST00000573867 DEFB132Q7Z7B7 95 aa38.17■■■■□ 3.7
SCARF1-207ENST00000573867 FLT4P35916 1363 aa38.16■■■■□ 3.7
SCARF1-207ENST00000573867 RGPD2P0DJD1 1756 aa38.16■■■■□ 3.7
SCARF1-207ENST00000573867 KIF24Q5T7B8 1368 aa38.15■■■■□ 3.7
SCARF1-207ENST00000573867 TNS1Q9HBL0 1735 aaKnown RBP38.14■■■■□ 3.7
SCARF1-207ENST00000573867 INSRP06213 1382 aa38.14■■■■□ 3.7
SCARF1-207ENST00000573867 RGPD1P0DJD0 1748 aa38.13■■■■□ 3.69
SCARF1-207ENST00000573867 NSD2O96028 1365 aa38.13■■■■□ 3.69
SCARF1-207ENST00000573867 MARCH10Q8NA82 808 aaPredicted RBP38.12■■■■□ 3.69
SCARF1-207ENST00000573867 TNS2Q63HR2 1409 aa38.12■■■■□ 3.69
SCARF1-207ENST00000573867 TNNT2P45379 298 aaPredicted RBP38.11■■■■□ 3.69
SCARF1-207ENST00000573867 POLKQ9UBT6 870 aa38.11■■■■□ 3.69
SCARF1-207ENST00000573867 TRIM37O94972 964 aa38.1■■■■□ 3.69
SCARF1-207ENST00000573867 IL2RBP14784 551 aa38.1■■■■□ 3.69
SCARF1-207ENST00000573867 SF3B2Q13435 895 aaKnown RBP38.1■■■■□ 3.69
SCARF1-207ENST00000573867 AMER1Q5JTC6 1135 aaPredicted RBP38.1■■■■□ 3.69
SCARF1-207ENST00000573867 KNSTRNQ9Y448 316 aa38.1■■■■□ 3.69
SCARF1-207ENST00000573867 OVOS2A0A0G2JMS6 1433 aa38.1■■■■□ 3.69
SCARF1-207ENST00000573867 MAP2P11137 1827 aaKnown RBP38.09■■■■□ 3.69
SCARF1-207ENST00000573867 PER1O15534 1290 aaPredicted RBP38.08■■■■□ 3.69
SCARF1-207ENST00000573867 NBPF6Q5VWK0 638 aa38.08■■■■□ 3.69
SCARF1-207ENST00000573867 NBPF4Q96M43 638 aa38.08■■■■□ 3.69
SCARF1-207ENST00000573867 EXOC5O00471 708 aa38.06■■■■□ 3.68
SCARF1-207ENST00000573867 PPM1GO15355 546 aaPredicted RBP38.06■■■■□ 3.68
SCARF1-207ENST00000573867 USHBP1Q8N6Y0 703 aa38.04■■■■□ 3.68
SCARF1-207ENST00000573867 SMG6Q86US8 1419 aaKnown RBP38.04■■■■□ 3.68
SCARF1-207ENST00000573867 MEGF6O75095 1541 aa38.02■■■■□ 3.68
SCARF1-207ENST00000573867 MORC1Q86VD1 984 aa38.01■■■■□ 3.68
SCARF1-207ENST00000573867 BAG6P46379 1132 aa38■■■■□ 3.67
SCARF1-207ENST00000573867 BCL9O00512 1426 aa37.99■■■■□ 3.67
SCARF1-207ENST00000573867 EN1Q05925 392 aaPredicted RBP37.99■■■■□ 3.67
SCARF1-207ENST00000573867 SBF2Q86WG5 1849 aa37.98■■■■□ 3.67
SCARF1-207ENST00000573867 PTF1AQ7RTS3 328 aa37.97■■■■□ 3.67
SCARF1-207ENST00000573867 NCAPD2Q15021 1401 aa37.94■■■■□ 3.66
SCARF1-207ENST00000573867 APBA3O96018 575 aa37.93■■■■□ 3.66
SCARF1-207ENST00000573867 SHANK3Q9BYB0 1731 aa37.92■■■■□ 3.66
SCARF1-207ENST00000573867 EIF4A2Q14240 407 aaKnown RBP37.9■■■■□ 3.66
SCARF1-207ENST00000573867 EZH2Q15910 746 aaKnown RBP37.9■■■■□ 3.66
SCARF1-207ENST00000573867 CC2D1BQ5T0F9 858 aaKnown RBP37.9■■■■□ 3.66
SCARF1-207ENST00000573867 CAMKK2Q96RR4 588 aa37.9■■■■□ 3.66
SCARF1-207ENST00000573867 EYA1Q99502 592 aa37.88■■■■□ 3.65
SCARF1-207ENST00000573867 NPC1L1Q9UHC9 1359 aa37.86■■■■□ 3.65
SCARF1-207ENST00000573867 DDX54Q8TDD1 881 aaKnown RBP37.86■■■■□ 3.65
SCARF1-207ENST00000573867 BCL11BQ9C0K0 894 aaPredicted RBP37.86■■■■□ 3.65
SCARF1-207ENST00000573867 ZCRB1Q8TBF4 217 aaKnown RBP37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms