RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
LINC01996-201ENST00000573270 NUTM2AQ8IVF1 878 aaPredicted RBP18.3■□□□□ 0.52
LINC01996-201ENST00000573270 FLT4P35916 1363 aa18.29■□□□□ 0.52
LINC01996-201ENST00000573270 CAMTA1Q9Y6Y1 1673 aa18.28■□□□□ 0.52
LINC01996-201ENST00000573270 RGPD2P0DJD1 1756 aa18.28■□□□□ 0.52
LINC01996-201ENST00000573270 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.28■□□□□ 0.52
LINC01996-201ENST00000573270 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
LINC01996-201ENST00000573270 POLKQ9UBT6 870 aa18.27■□□□□ 0.52
LINC01996-201ENST00000573270 CHRNA2Q15822 529 aa18.26■□□□□ 0.51
LINC01996-201ENST00000573270 ARHGEF25Q86VW2 580 aa18.26■□□□□ 0.51
LINC01996-201ENST00000573270 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
LINC01996-201ENST00000573270 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
LINC01996-201ENST00000573270 ADAMTS2O95450 1211 aa18.25■□□□□ 0.51
LINC01996-201ENST00000573270 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
LINC01996-201ENST00000573270 KIF24Q5T7B8 1368 aa18.25■□□□□ 0.51
LINC01996-201ENST00000573270 WNK3Q9BYP7 1800 aa18.25■□□□□ 0.51
LINC01996-201ENST00000573270 COL5A2P05997 1499 aaPredicted RBP18.25■□□□□ 0.51
LINC01996-201ENST00000573270 MIER1Q8N108 512 aa18.24■□□□□ 0.51
LINC01996-201ENST00000573270 HOXC9P31274 260 aa18.23■□□□□ 0.51
LINC01996-201ENST00000573270 AMPHP49418 695 aa18.23■□□□□ 0.51
LINC01996-201ENST00000573270 MTHFSP49914 203 aa18.23■□□□□ 0.51
LINC01996-201ENST00000573270 SLIT2O94813 1529 aa18.22■□□□□ 0.51
LINC01996-201ENST00000573270 INSRP06213 1382 aa18.21■□□□□ 0.51
LINC01996-201ENST00000573270 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
LINC01996-201ENST00000573270 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
LINC01996-201ENST00000573270 IP6K1Q92551 441 aa18.19■□□□□ 0.5
LINC01996-201ENST00000573270 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
LINC01996-201ENST00000573270 HSP90AB2PQ58FF8 381 aa18.18■□□□□ 0.5
LINC01996-201ENST00000573270 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
LINC01996-201ENST00000573270 C8orf37Q96NL8 207 aa18.18■□□□□ 0.5
LINC01996-201ENST00000573270 AXIN2Q9Y2T1 843 aa18.18■□□□□ 0.5
LINC01996-201ENST00000573270 ERBB3P21860 1342 aa18.17■□□□□ 0.5
LINC01996-201ENST00000573270 EIF4A2Q14240 407 aaKnown RBP18.16■□□□□ 0.5
LINC01996-201ENST00000573270 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
LINC01996-201ENST00000573270 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
LINC01996-201ENST00000573270 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
LINC01996-201ENST00000573270 PARP4Q9UKK3 1724 aaKnown RBP18.15■□□□□ 0.5
LINC01996-201ENST00000573270 BTG4Q9NY30 223 aa18.15■□□□□ 0.5
LINC01996-201ENST00000573270 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.49
LINC01996-201ENST00000573270 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
LINC01996-201ENST00000573270 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
LINC01996-201ENST00000573270 NCAPD2Q15021 1401 aa18.13■□□□□ 0.49
LINC01996-201ENST00000573270 DIAPH1O60610 1272 aaKnown RBP18.12■□□□□ 0.49
LINC01996-201ENST00000573270 AFF2P51816 1311 aa18.12■□□□□ 0.49
LINC01996-201ENST00000573270 CRB1P82279 1406 aa18.12■□□□□ 0.49
LINC01996-201ENST00000573270 GLI3P10071 1580 aa18.12■□□□□ 0.49
LINC01996-201ENST00000573270 CSB-PGBD3P0DP91 1061 aa18.11■□□□□ 0.49
LINC01996-201ENST00000573270 IL13P35225 146 aa18.11■□□□□ 0.49
LINC01996-201ENST00000573270 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
LINC01996-201ENST00000573270 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
LINC01996-201ENST00000573270 LRRC37A3O60309 1634 aa18.1■□□□□ 0.49
LINC01996-201ENST00000573270 IGSF1Q8N6C5 1336 aa18.1■□□□□ 0.49
LINC01996-201ENST00000573270 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
LINC01996-201ENST00000573270 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
LINC01996-201ENST00000573270 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
LINC01996-201ENST00000573270 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
LINC01996-201ENST00000573270 ATRNO75882 1429 aa18.08■□□□□ 0.49
LINC01996-201ENST00000573270 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.48
LINC01996-201ENST00000573270 MEGF6O75095 1541 aa18.08■□□□□ 0.48
LINC01996-201ENST00000573270 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
LINC01996-201ENST00000573270 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
LINC01996-201ENST00000573270 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
LINC01996-201ENST00000573270 EVA1CP58658 441 aa18.06■□□□□ 0.48
LINC01996-201ENST00000573270 EYA1Q99502 592 aa18.06■□□□□ 0.48
LINC01996-201ENST00000573270 NLRP2Q9NX02 1062 aa18.06■□□□□ 0.48
LINC01996-201ENST00000573270 USP21Q9UK80 565 aa18.06■□□□□ 0.48
LINC01996-201ENST00000573270 KDRP35968 1356 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 NBPF6Q5VWK0 638 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 TOM1L2Q6ZVM7 507 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 NBPF4Q96M43 638 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
LINC01996-201ENST00000573270 HMOX1P09601 288 aa18.04■□□□□ 0.48
LINC01996-201ENST00000573270 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
LINC01996-201ENST00000573270 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC01996-201ENST00000573270 DISP2A7MBM2 1401 aa18.04■□□□□ 0.48
LINC01996-201ENST00000573270 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
LINC01996-201ENST00000573270 SPATA31A5Q5VU36 1347 aa18.02■□□□□ 0.48
LINC01996-201ENST00000573270 SPATA31A7Q8IWB4 1347 aa18.02■□□□□ 0.48
LINC01996-201ENST00000573270 SULT6B1Q6IMI4 303 aa18.02■□□□□ 0.48
LINC01996-201ENST00000573270 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
LINC01996-201ENST00000573270 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
LINC01996-201ENST00000573270 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
LINC01996-201ENST00000573270 SPATA31A1Q5TZJ5 1347 aa18.01■□□□□ 0.47
LINC01996-201ENST00000573270 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
LINC01996-201ENST00000573270 VPS72Q15906 364 aa18.01■□□□□ 0.47
LINC01996-201ENST00000573270 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
LINC01996-201ENST00000573270 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
LINC01996-201ENST00000573270 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
LINC01996-201ENST00000573270 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
LINC01996-201ENST00000573270 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
LINC01996-201ENST00000573270 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
LINC01996-201ENST00000573270 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
LINC01996-201ENST00000573270 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
LINC01996-201ENST00000573270 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
LINC01996-201ENST00000573270 TRPC5Q9UL62 973 aaPredicted RBP17.98■□□□□ 0.47
LINC01996-201ENST00000573270 ADRA2BP18089 450 aa17.97■□□□□ 0.47
LINC01996-201ENST00000573270 ZNF772Q68DY9 489 aaPredicted RBP17.97■□□□□ 0.47
LINC01996-201ENST00000573270 BRWD3Q6RI45 1802 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms